RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, human

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-222	ENST00000478095	SPINT3	P49223	89 aa		10.24	□□□□□ -0.77
HDAC6-222	ENST00000478095	YPEL5	P62699	121 aa		10.24	□□□□□ -0.77
HDAC6-222	ENST00000478095	EIF2B5	Q13144	721 aa	Known RBP	10.24	□□□□□ -0.77
HDAC6-222	ENST00000478095	PTK2B	Q14289	1009 aa		10.24	□□□□□ -0.77
HDAC6-222	ENST00000478095	PUM1	Q14671	1186 aa	Known RBP eCLIP	10.24	□□□□□ -0.77
HDAC6-222	ENST00000478095	TTC27	Q6P3X3	843 aa		10.24	□□□□□ -0.77
HDAC6-222	ENST00000478095	DRICH1	Q6PGQ1	229 aa	Predicted RBP	10.24	□□□□□ -0.77
HDAC6-222	ENST00000478095	ENPP7	Q6UWV6	458 aa		10.24	□□□□□ -0.77
HDAC6-222	ENST00000478095	MACC1	Q6ZN28	852 aa		10.24	□□□□□ -0.77
HDAC6-222	ENST00000478095	RD3	Q7Z3Z2	195 aa		10.24	□□□□□ -0.77
HDAC6-222	ENST00000478095	GLT6D1	Q7Z4J2	308 aa		10.24	□□□□□ -0.77
HDAC6-222	ENST00000478095	TRIM74	Q86UV6	250 aa		10.24	□□□□□ -0.77
HDAC6-222	ENST00000478095	HEATR4	Q86WZ0	1026 aa		10.24	□□□□□ -0.77
HDAC6-222	ENST00000478095	DCP2	Q8IU60	420 aa	Known RBP	10.24	□□□□□ -0.77
HDAC6-222	ENST00000478095	NAXD	Q8IW45	347 aa		10.24	□□□□□ -0.77
HDAC6-222	ENST00000478095	OXR1	Q8N573	874 aa		10.24	□□□□□ -0.77
HDAC6-222	ENST00000478095	SAP25	Q8TEE9	199 aa		10.24	□□□□□ -0.77
HDAC6-222	ENST00000478095	MAGOHB	Q96A72	148 aa	Known RBP	10.24	□□□□□ -0.77
HDAC6-222	ENST00000478095	PDXP	Q96GD0	296 aa		10.24	□□□□□ -0.77
HDAC6-222	ENST00000478095	CAPZA3	Q96KX2	299 aa		10.24	□□□□□ -0.77
HDAC6-222	ENST00000478095	TCEAL2	Q9H3H9	227 aa	Predicted RBP	10.24	□□□□□ -0.77
HDAC6-222	ENST00000478095	SUDS3	Q9H7L9	328 aa	Predicted RBP	10.24	□□□□□ -0.77
HDAC6-222	ENST00000478095	ERVMER34-1	Q9H9K5	563 aa		10.24	□□□□□ -0.77
HDAC6-222	ENST00000478095	ETNK1	Q9HBU6	452 aa		10.24	□□□□□ -0.77
HDAC6-222	ENST00000478095	BPIFA1	Q9NP55	256 aa		10.24	□□□□□ -0.77
HDAC6-222	ENST00000478095	UCKL1	Q9NWZ5	548 aa		10.24	□□□□□ -0.77
HDAC6-222	ENST00000478095	PLA2G2E	Q9NZK7	142 aa		10.24	□□□□□ -0.77
HDAC6-222	ENST00000478095	PKD2L2	Q9NZM6	624 aa		10.24	□□□□□ -0.77
HDAC6-222	ENST00000478095	KLF15	Q9UIH9	416 aa		10.24	□□□□□ -0.77
HDAC6-222	ENST00000478095	TTC7A	Q9ULT0	858 aa	Predicted RBP	10.24	□□□□□ -0.77
HDAC6-222	ENST00000478095	ZKSCAN5	Q9Y2L8	839 aa		10.24	□□□□□ -0.77
HDAC6-222	ENST00000478095	CTAGE9	A4FU28	777 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	TMEM202	A6NGA9	273 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	C3orf80	F5H4A9	247 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	TOR1B	O14657	336 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	INPP4B	O15327	924 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	FFAR2	O15552	330 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	PCDHGA12	O60330	932 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	DFNA5	O60443	496 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	CSF2	P04141	144 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	ZNF883	P0CG24	379 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	NME1	P15531	152 aa	Known RBP	10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	TSHR	P16473	764 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	JUND	P17535	347 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	TCP1	P17987	556 aa	Known RBP	10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	HTR1B	P28222	390 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	RPL22	P35268	128 aa	Known RBP	10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	RXRG	P48443	463 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	VPS41	P49754	854 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	NOVA1	P51513	510 aa	Known RBP	10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	TERF1	P54274	439 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	KIAA1024L	P59773	190 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	CDK3	Q00526	305 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	SLC14A1	Q13336	389 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	C1orf61	Q13536	156 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	TRIP13	Q15645	432 aa	Predicted RBP	10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	ALG11	Q2TAA5	492 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	PAPD7	Q5XG87	772 aa	Known RBP	10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	KCTD11	Q693B1	232 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	DENND5A	Q6IQ26	1287 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	DOK6	Q6PKX4	331 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	RANBP10	Q6VN20	620 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	TMC3	Q7Z5M5	1100 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	HID1	Q8IV36	788 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	KLHDC8B	Q8IXV7	354 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	PHACTR4	Q8IZ21	702 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	NRSN1	Q8IZ57	195 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	TTC30B	Q8N4P2	665 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	GPR26	Q8NDV2	337 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	ACTRT1	Q8TDG2	376 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	TSACC	Q96A04	125 aa	Predicted RBP	10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	PPP1R2P1	Q96PQ5	205 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	NAP1L3	Q99457	506 aa	Predicted RBP	10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	FAM83D	Q9H4H8	585 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	LRRC40	Q9H9A6	602 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	FGF22	Q9HCT0	170 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	MRPL40	Q9NQ50	206 aa	Known RBP	10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	RAB6B	Q9NRW1	208 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	HOMER3	Q9NSC5	361 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	PAK5	Q9P286	719 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	KL	Q9UEF7	1012 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	MOSPD1	Q9UJG1	213 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	TSR3	Q9UJK0	312 aa	Known RBP	10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	DRG1	Q9Y295	367 aa	Known RBP	10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	PCDHGB2	Q9Y5G2	931 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	ARL5A	Q9Y689	179 aa		10.23	□□□□□ -0.77
HDAC6-222	ENST00000478095	GOLGA6L10	A0A0M3HER8	536 aa		10.22	□□□□□ -0.77
HDAC6-222	ENST00000478095	SPAAR	A0A1B0GVQ0	90 aa		10.22	□□□□□ -0.77
HDAC6-222	ENST00000478095	FADS2P1	A8MWK0	482 aa		10.22	□□□□□ -0.77
HDAC6-222	ENST00000478095		E7EVH7	732 aa		10.22	□□□□□ -0.77
HDAC6-222	ENST00000478095		H3BM21	787 aa		10.22	□□□□□ -0.77
HDAC6-222	ENST00000478095	CES2	O00748	559 aa		10.22	□□□□□ -0.77
HDAC6-222	ENST00000478095	YKT6	O15498	198 aa		10.22	□□□□□ -0.77
HDAC6-222	ENST00000478095	FLRT2	O43155	660 aa		10.22	□□□□□ -0.77
HDAC6-222	ENST00000478095	PIAS2	O75928	621 aa		10.22	□□□□□ -0.77
HDAC6-222	ENST00000478095	AP2A1	O95782	977 aa		10.22	□□□□□ -0.77
HDAC6-222	ENST00000478095	CELA2B	P08218	269 aa	Predicted RBP	10.22	□□□□□ -0.77
HDAC6-222	ENST00000478095	MYCLP1	P12525	358 aa	Predicted RBP	10.22	□□□□□ -0.77
HDAC6-222	ENST00000478095	BPI	P17213	487 aa		10.22	□□□□□ -0.77
HDAC6-222	ENST00000478095	TPH1	P17752	444 aa		10.22	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms