RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 MCMBPQ9BTE3 642 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 KIFC1Q9BW19 673 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 SENP6Q9GZR1 1112 aaPredicted RBP4.98□□□□□ -1.61
SF3B6-202ENST00000478050 TKTL2Q9H0I9 626 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 VCXQ9H320 206 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 VCX3BQ9H321 246 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 CATSPERBQ9H7T0 1116 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 NMRAL1Q9HBL8 299 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 DMAP1Q9NPF5 467 aaPredicted RBP4.98□□□□□ -1.61
SF3B6-202ENST00000478050 ANLNQ9NQW6 1124 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 IARS2Q9NSE4 1012 aaKnown RBP4.98□□□□□ -1.61
SF3B6-202ENST00000478050 PNPOQ9NVS9 261 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 PIH1D1Q9NWS0 290 aaKnown RBP4.98□□□□□ -1.61
SF3B6-202ENST00000478050 ARHGEF38Q9NXL2 777 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 NDE1Q9NXR1 346 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 FLRT1Q9NZU1 646 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 FNIP2Q9P278 1114 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 OR12D3Q9UGF7 316 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 SLC7A8Q9UHI5 535 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 CPA4Q9UI42 421 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 TLK1Q9UKI8 766 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 ST3GAL5Q9UNP4 418 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 RAP2CQ9Y3L5 183 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 CHD5Q8TDI0 1954 aa4.98□□□□□ -1.61
SF3B6-202ENST00000478050 A0A087X1B8 175 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 A0A088AWK7 358 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 ARL5CA6NH57 179 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 CASTOR2A6NHX0 329 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 MEI4A8MW99 385 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 G3V2L1 256 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 I6L893 689 aaPredicted RBP4.97□□□□□ -1.61
SF3B6-202ENST00000478050 M0QZQ0 153 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 ENPP3O14638 875 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 MATN3O15232 486 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 IRAK2O43187 625 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 DDHD2O94830 711 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 COX4I1P13073 169 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 PAMP19021 973 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 NCF2P19878 526 aaPredicted RBP4.97□□□□□ -1.61
SF3B6-202ENST00000478050 TYMPP19971 482 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 NME2P22392 152 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 NMBRP28336 390 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 CRABP2P29373 138 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 SERPINB5P36952 375 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 NUMBP49757 651 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 SCNN1GP51170 649 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 KCNQ1P51787 676 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 CACNA2D1P54289 1103 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 RPL26P61254 145 aaKnown RBP4.97□□□□□ -1.61
SF3B6-202ENST00000478050 XIAPP98170 497 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 IRF9Q00978 393 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 KRTAP1-1Q07627 177 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 MGAT3Q09327 533 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 ILF2Q12905 390 aaKnown RBP4.97□□□□□ -1.61
SF3B6-202ENST00000478050 GRIK3Q13003 919 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 KLF10Q13118 480 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 PRKAA1Q13131 559 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 OLIG2Q13516 323 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 EIF4EBP2Q13542 120 aaPredicted RBP4.97□□□□□ -1.61
SF3B6-202ENST00000478050 SLC12A1Q13621 1099 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 USP10Q14694 798 aaKnown RBP4.97□□□□□ -1.61
SF3B6-202ENST00000478050 PPP2R5DQ14738 602 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 GRM3Q14832 879 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 HERC3Q15034 1050 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 SHHQ15465 462 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 CCL14Q16627 93 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 UPP1Q16831 310 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 TIGD5Q53EQ6 642 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 CERCAMQ5T4B2 595 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 MANEALQ5VSG8 457 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 BTBD8Q5XKL5 378 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 KIAA0930Q6ICG6 404 aaPredicted RBP4.97□□□□□ -1.61
SF3B6-202ENST00000478050 CAPRIN2Q6IMN6 1127 aaKnown RBP4.97□□□□□ -1.61
SF3B6-202ENST00000478050 PKN3Q6P5Z2 889 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 PGM2L1Q6PCE3 622 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 C16orf89Q6UX73 402 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 RAPH1Q70E73 1250 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 REC114Q7Z4M0 266 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 ZC3HC1Q86WB0 502 aaKnown RBP4.97□□□□□ -1.61
SF3B6-202ENST00000478050 ARHGAP12Q8IWW6 846 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 TDRD5Q8NAT2 981 aaKnown RBP4.97□□□□□ -1.61
SF3B6-202ENST00000478050 DTX3LQ8TDB6 740 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 STK35Q8TDR2 534 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 STYXQ8WUJ0 223 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 PDCD6IPQ8WUM4 868 aaKnown RBP4.97□□□□□ -1.61
SF3B6-202ENST00000478050 NRG4Q8WWG1 115 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 LPPQ93052 612 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 FATE1Q969F0 183 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 AZIN2Q96A70 460 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 FAM136AQ96C01 138 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 MFSD3Q96ES6 412 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 SCYL1Q96KG9 808 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 NR1H4Q96RI1 486 aaPredicted RBP4.97□□□□□ -1.61
SF3B6-202ENST00000478050 KCNK16Q96T55 309 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 AGAP2Q99490 1192 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 PKMYT1Q99640 499 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 ZNF184Q99676 751 aaPredicted RBP4.97□□□□□ -1.61
SF3B6-202ENST00000478050 RTP3Q9BQQ7 232 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 RTKNQ9BST9 563 aa4.97□□□□□ -1.61
SF3B6-202ENST00000478050 FAM167BQ9BTA0 163 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms