RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 ATP1A2P50993 1020 aa11.71□□□□□ -0.53
CPSF7-211ENST00000477890 LIMK2P53671 638 aa11.71□□□□□ -0.53
CPSF7-211ENST00000477890 KLHL30Q0D2K2 578 aa11.71□□□□□ -0.53
CPSF7-211ENST00000477890 TRA2AQ13595 282 aaKnown RBP eCLIP11.71□□□□□ -0.53
CPSF7-211ENST00000477890 BOLA3Q53S33 107 aa11.71□□□□□ -0.53
CPSF7-211ENST00000477890 ARMC12Q5T9G4 340 aa11.71□□□□□ -0.53
CPSF7-211ENST00000477890 MARC1Q5VT66 337 aa11.71□□□□□ -0.53
CPSF7-211ENST00000477890 E4F1Q66K89 784 aaPredicted RBP11.71□□□□□ -0.53
CPSF7-211ENST00000477890 ATG14Q6ZNE5 492 aa11.71□□□□□ -0.53
CPSF7-211ENST00000477890 RFLNAQ6ZTI6 216 aa11.71□□□□□ -0.53
CPSF7-211ENST00000477890 TECPR1Q7Z6L1 1165 aa11.71□□□□□ -0.53
CPSF7-211ENST00000477890 OR4D9Q8NGE8 314 aa11.71□□□□□ -0.53
CPSF7-211ENST00000477890 PMEPA1Q969W9 287 aa11.71□□□□□ -0.53
CPSF7-211ENST00000477890 TRIM11Q96F44 468 aa11.71□□□□□ -0.53
CPSF7-211ENST00000477890 CSPG4P5Q96PW8 444 aa11.71□□□□□ -0.53
CPSF7-211ENST00000477890 OR2M4Q96R27 311 aa11.71□□□□□ -0.53
CPSF7-211ENST00000477890 MCCC1Q96RQ3 725 aaPredicted RBP11.71□□□□□ -0.53
CPSF7-211ENST00000477890 ZMYND15Q9H091 742 aa11.71□□□□□ -0.53
CPSF7-211ENST00000477890 MRPL47Q9HD33 250 aaKnown RBP11.71□□□□□ -0.53
CPSF7-211ENST00000477890 NT5MQ9NPB1 228 aa11.71□□□□□ -0.53
CPSF7-211ENST00000477890 RTN4Q9NQC3 1192 aaKnown RBP11.71□□□□□ -0.53
CPSF7-211ENST00000477890 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.71□□□□□ -0.53
CPSF7-211ENST00000477890 KCNK4Q9NYG8 393 aa11.71□□□□□ -0.53
CPSF7-211ENST00000477890 AIPL1Q9NZN9 384 aa11.71□□□□□ -0.53
CPSF7-211ENST00000477890 IL17BQ9UHF5 180 aa11.71□□□□□ -0.53
CPSF7-211ENST00000477890 TMEM98Q9Y2Y6 226 aa11.71□□□□□ -0.53
CPSF7-211ENST00000477890 IGHV1OR21-1A0A087WYE8 117 aa11.7□□□□□ -0.54
CPSF7-211ENST00000477890 TERTO14746 1132 aaKnown RBP11.7□□□□□ -0.54
CPSF7-211ENST00000477890 ARHGAP6O43182 974 aa11.7□□□□□ -0.54
CPSF7-211ENST00000477890 PPFIA2O75334 1257 aa11.7□□□□□ -0.54
CPSF7-211ENST00000477890 SOD1P00441 154 aa11.7□□□□□ -0.54
CPSF7-211ENST00000477890 PDHA1P08559 390 aa11.7□□□□□ -0.54
CPSF7-211ENST00000477890 MYBL1P10243 752 aa11.7□□□□□ -0.54
CPSF7-211ENST00000477890 RARAP10276 462 aa11.7□□□□□ -0.54
CPSF7-211ENST00000477890 SKILP12757 684 aa11.7□□□□□ -0.54
CPSF7-211ENST00000477890 CSF2RBP32927 897 aa11.7□□□□□ -0.54
CPSF7-211ENST00000477890 CSTF2P33240 577 aaKnown RBP eCLIP11.7□□□□□ -0.54
CPSF7-211ENST00000477890 SERPINB6P35237 376 aa11.7□□□□□ -0.54
CPSF7-211ENST00000477890 PRKCIP41743 596 aa11.7□□□□□ -0.54
CPSF7-211ENST00000477890 PPM1FP49593 454 aaPredicted RBP11.7□□□□□ -0.54
CPSF7-211ENST00000477890 ARSDP51689 593 aa11.7□□□□□ -0.54
CPSF7-211ENST00000477890 CDH6P55285 790 aa11.7□□□□□ -0.54
CPSF7-211ENST00000477890 DPTQ07507 201 aa11.7□□□□□ -0.54
CPSF7-211ENST00000477890 ITKQ08881 620 aa11.7□□□□□ -0.54
CPSF7-211ENST00000477890 CLCA4Q14CN2 919 aa11.7□□□□□ -0.54
CPSF7-211ENST00000477890 RALGPS1Q5JS13 557 aa11.7□□□□□ -0.54
CPSF7-211ENST00000477890 LRRC66Q68CR7 880 aa11.7□□□□□ -0.54
CPSF7-211ENST00000477890 MARK2Q7KZI7 788 aaKnown RBP11.7□□□□□ -0.54
CPSF7-211ENST00000477890 TRIM74Q86UV6 250 aa11.7□□□□□ -0.54
CPSF7-211ENST00000477890 NDUFAF2Q8N183 169 aa11.7□□□□□ -0.54
CPSF7-211ENST00000477890 IL22RA1Q8N6P7 574 aa11.7□□□□□ -0.54
CPSF7-211ENST00000477890 AGBL5Q8NDL9 886 aa11.7□□□□□ -0.54
CPSF7-211ENST00000477890 CCDC112Q8NEF3 446 aa11.7□□□□□ -0.54
CPSF7-211ENST00000477890 PIH1D2Q8WWB5 315 aa11.7□□□□□ -0.54
CPSF7-211ENST00000477890 ART4Q93070 314 aa11.7□□□□□ -0.54
CPSF7-211ENST00000477890 SCAMP4Q969E2 229 aa11.7□□□□□ -0.54
CPSF7-211ENST00000477890 NKD1Q969G9 470 aa11.7□□□□□ -0.54
CPSF7-211ENST00000477890 AP2M1Q96CW1 435 aa11.7□□□□□ -0.54
CPSF7-211ENST00000477890 SMIM14Q96QK8 99 aa11.7□□□□□ -0.54
CPSF7-211ENST00000477890 SEMA3CQ99985 751 aa11.7□□□□□ -0.54
CPSF7-211ENST00000477890 FUCA2Q9BTY2 467 aa11.7□□□□□ -0.54
CPSF7-211ENST00000477890 ABCG8Q9H221 673 aa11.7□□□□□ -0.54
CPSF7-211ENST00000477890 TMEM9Q9P0T7 183 aa11.7□□□□□ -0.54
CPSF7-211ENST00000477890 PPIL1Q9Y3C6 166 aa11.7□□□□□ -0.54
CPSF7-211ENST00000477890 PCDHGA3Q9Y5H0 932 aa11.7□□□□□ -0.54
CPSF7-211ENST00000477890 B3GALT1Q9Y5Z6 326 aa11.7□□□□□ -0.54
CPSF7-211ENST00000477890 SPTA1P02549 2419 aa11.69□□□□□ -0.54
CPSF7-211ENST00000477890 TRBV23OR9-2A0A075B6M9 112 aa11.69□□□□□ -0.54
CPSF7-211ENST00000477890 CYSRT1A8MQ03 144 aa11.69□□□□□ -0.54
CPSF7-211ENST00000477890 SUV39H1O43463 412 aa11.69□□□□□ -0.54
CPSF7-211ENST00000477890 THRAP10827 490 aa11.69□□□□□ -0.54
CPSF7-211ENST00000477890 UGT1A3P35503 534 aa11.69□□□□□ -0.54
CPSF7-211ENST00000477890 EPHB1P54762 984 aa11.69□□□□□ -0.54
CPSF7-211ENST00000477890 GPLD1P80108 840 aa11.69□□□□□ -0.54
CPSF7-211ENST00000477890 TYRO3Q06418 890 aa11.69□□□□□ -0.54
CPSF7-211ENST00000477890 PIGHQ14442 188 aaPredicted RBP11.69□□□□□ -0.54
CPSF7-211ENST00000477890 FILIP1LQ4L180 1135 aa11.69□□□□□ -0.54
CPSF7-211ENST00000477890 PYCR3Q53H96 274 aa11.69□□□□□ -0.54
CPSF7-211ENST00000477890 TXNRD3NBQ6F5E7 133 aa11.69□□□□□ -0.54
CPSF7-211ENST00000477890 ADAMTSL4Q6UY14 1074 aa11.69□□□□□ -0.54
CPSF7-211ENST00000477890 ZNF761Q86XN6 746 aaPredicted RBP11.69□□□□□ -0.54
CPSF7-211ENST00000477890 FAM129CQ86XR2 697 aa11.69□□□□□ -0.54
CPSF7-211ENST00000477890 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.69□□□□□ -0.54
CPSF7-211ENST00000477890 SCARF2Q96GP6 870 aaPredicted RBP11.69□□□□□ -0.54
CPSF7-211ENST00000477890 AHCYL2Q96HN2 611 aaKnown RBP11.69□□□□□ -0.54
CPSF7-211ENST00000477890 GBP4Q96PP9 640 aa11.69□□□□□ -0.54
CPSF7-211ENST00000477890 DPYSL5Q9BPU6 564 aa11.69□□□□□ -0.54
CPSF7-211ENST00000477890 DDA1Q9BW61 102 aa11.69□□□□□ -0.54
CPSF7-211ENST00000477890 SLC12A9Q9BXP2 914 aa11.69□□□□□ -0.54
CPSF7-211ENST00000477890 SLC25A18Q9H1K4 315 aa11.69□□□□□ -0.54
CPSF7-211ENST00000477890 PCDH18Q9HCL0 1135 aa11.69□□□□□ -0.54
CPSF7-211ENST00000477890 OCIAD1Q9NX40 245 aa11.69□□□□□ -0.54
CPSF7-211ENST00000477890 SLC39A1Q9NY26 324 aa11.69□□□□□ -0.54
CPSF7-211ENST00000477890 A0A0J9YYE9 177 aa11.68□□□□□ -0.54
CPSF7-211ENST00000477890 EFCAB7A8K855 629 aa11.68□□□□□ -0.54
CPSF7-211ENST00000477890 INPP4BO15327 924 aa11.68□□□□□ -0.54
CPSF7-211ENST00000477890 FZD6O60353 706 aa11.68□□□□□ -0.54
CPSF7-211ENST00000477890 ASMTLO95671 621 aa11.68□□□□□ -0.54
CPSF7-211ENST00000477890 TRBC1P01850 177 aa11.68□□□□□ -0.54
CPSF7-211ENST00000477890 LIFP15018 202 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms