RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 MAP3K6O95382 1288 aa20.15■□□□□ 0.82
PDLIM1-202ENST00000477757 UCHL3P15374 230 aa20.15■□□□□ 0.82
PDLIM1-202ENST00000477757 VIPR1P32241 457 aa20.15■□□□□ 0.82
PDLIM1-202ENST00000477757 HTR7P34969 479 aa20.15■□□□□ 0.82
PDLIM1-202ENST00000477757 NSUN2Q08J23 767 aaKnown RBP eCLIP20.15■□□□□ 0.82
PDLIM1-202ENST00000477757 RAET1GQ6H3X3 334 aa20.15■□□□□ 0.82
PDLIM1-202ENST00000477757 DOK6Q6PKX4 331 aa20.15■□□□□ 0.82
PDLIM1-202ENST00000477757 CBARPQ8N350 705 aaPredicted RBP20.15■□□□□ 0.82
PDLIM1-202ENST00000477757 SLC30A5Q8TAD4 765 aa20.15■□□□□ 0.82
PDLIM1-202ENST00000477757 CPT1CQ8TCG5 803 aa20.15■□□□□ 0.82
PDLIM1-202ENST00000477757 CELF6Q96J87 481 aaKnown RBP20.15■□□□□ 0.82
PDLIM1-202ENST00000477757 TLK1Q9UKI8 766 aa20.15■□□□□ 0.82
PDLIM1-202ENST00000477757 FZD10Q9ULW2 581 aa20.15■□□□□ 0.82
PDLIM1-202ENST00000477757 ARHGAP42A6NI28 874 aa20.14■□□□□ 0.81
PDLIM1-202ENST00000477757 TTLL8A6PVC2 850 aa20.14■□□□□ 0.81
PDLIM1-202ENST00000477757 CCP110O43303 1012 aa20.14■□□□□ 0.81
PDLIM1-202ENST00000477757 PDGFAP04085 211 aa20.14■□□□□ 0.81
PDLIM1-202ENST00000477757 FURINP09958 794 aa20.14■□□□□ 0.81
PDLIM1-202ENST00000477757 DLSTP36957 453 aa20.14■□□□□ 0.81
PDLIM1-202ENST00000477757 PAPOLAP51003 745 aaKnown RBP20.14■□□□□ 0.81
PDLIM1-202ENST00000477757 TPI1P60174 286 aa20.14■□□□□ 0.81
PDLIM1-202ENST00000477757 FMO1Q01740 532 aa20.14■□□□□ 0.81
PDLIM1-202ENST00000477757 CDR2Q01850 454 aa20.14■□□□□ 0.81
PDLIM1-202ENST00000477757 PTP4A2Q12974 167 aa20.14■□□□□ 0.81
PDLIM1-202ENST00000477757 LRP8Q14114 963 aa20.14■□□□□ 0.81
PDLIM1-202ENST00000477757 RFTN1Q14699 578 aaPredicted RBP20.14■□□□□ 0.81
PDLIM1-202ENST00000477757 MIIPQ5JXC2 388 aa20.14■□□□□ 0.81
PDLIM1-202ENST00000477757 WDR59Q6PJI9 974 aa20.14■□□□□ 0.81
PDLIM1-202ENST00000477757 HSD11B1LQ7Z5J1 315 aa20.14■□□□□ 0.81
PDLIM1-202ENST00000477757 ULBP3Q9BZM4 244 aa20.14■□□□□ 0.81
PDLIM1-202ENST00000477757 SLC39A8Q9C0K1 460 aa20.14■□□□□ 0.81
PDLIM1-202ENST00000477757 SARS2Q9NP81 518 aaKnown RBP20.14■□□□□ 0.81
PDLIM1-202ENST00000477757 CROTQ9UKG9 612 aa20.14■□□□□ 0.81
PDLIM1-202ENST00000477757 A1L4Q6 167 aa20.13■□□□□ 0.81
PDLIM1-202ENST00000477757 GOLGA6CA6NDK9 693 aa20.13■□□□□ 0.81
PDLIM1-202ENST00000477757 GOLGA6BA6NDN3 693 aa20.13■□□□□ 0.81
PDLIM1-202ENST00000477757 PSMD11O00231 422 aa20.13■□□□□ 0.81
PDLIM1-202ENST00000477757 HTRA2O43464 458 aaPredicted RBP20.13■□□□□ 0.81
PDLIM1-202ENST00000477757 GOLGA6DP0CG33 693 aa20.13■□□□□ 0.81
PDLIM1-202ENST00000477757 LHCGRP22888 699 aa20.13■□□□□ 0.81
PDLIM1-202ENST00000477757 SCNN1BP51168 640 aa20.13■□□□□ 0.81
PDLIM1-202ENST00000477757 HHEXQ03014 270 aa20.13■□□□□ 0.81
PDLIM1-202ENST00000477757 ERV3-1Q14264 604 aa20.13■□□□□ 0.81
PDLIM1-202ENST00000477757 VWA3BQ502W6 1294 aa20.13■□□□□ 0.81
PDLIM1-202ENST00000477757 PYCR3Q53H96 274 aa20.13■□□□□ 0.81
PDLIM1-202ENST00000477757 DENND2CQ68D51 928 aa20.13■□□□□ 0.81
PDLIM1-202ENST00000477757 SCYL2Q6P3W7 929 aa20.13■□□□□ 0.81
PDLIM1-202ENST00000477757 NCSTNQ92542 709 aa20.13■□□□□ 0.81
PDLIM1-202ENST00000477757 PSKH2Q96QS6 385 aa20.13■□□□□ 0.81
PDLIM1-202ENST00000477757 SELENOOQ9BVL4 669 aa20.13■□□□□ 0.81
PDLIM1-202ENST00000477757 STK33Q9BYT3 514 aa20.13■□□□□ 0.81
PDLIM1-202ENST00000477757 GOLGA6AQ9NYA3 693 aa20.13■□□□□ 0.81
PDLIM1-202ENST00000477757 MN1Q10571 1320 aaPredicted RBP20.12■□□□□ 0.81
PDLIM1-202ENST00000477757 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.12■□□□□ 0.81
PDLIM1-202ENST00000477757 A0A1W2PQ67 120 aa20.12■□□□□ 0.81
PDLIM1-202ENST00000477757 SOCS5O75159 536 aa20.12■□□□□ 0.81
PDLIM1-202ENST00000477757 EML2O95834 649 aa20.12■□□□□ 0.81
PDLIM1-202ENST00000477757 SOD1P00441 154 aa20.12■□□□□ 0.81
PDLIM1-202ENST00000477757 CPP00450 1065 aa20.12■□□□□ 0.81
PDLIM1-202ENST00000477757 ANKRD34CP0C6C1 535 aa20.12■□□□□ 0.81
PDLIM1-202ENST00000477757 CHRNB2P17787 502 aa20.12■□□□□ 0.81
PDLIM1-202ENST00000477757 ZNF143P52747 638 aaPredicted RBP20.12■□□□□ 0.81
PDLIM1-202ENST00000477757 EPHA4P54764 986 aa20.12■□□□□ 0.81
PDLIM1-202ENST00000477757 DPTQ07507 201 aa20.12■□□□□ 0.81
PDLIM1-202ENST00000477757 ADAMTSL4Q6UY14 1074 aa20.12■□□□□ 0.81
PDLIM1-202ENST00000477757 Q6ZVL8 140 aa20.12■□□□□ 0.81
PDLIM1-202ENST00000477757 APLFQ8IW19 511 aaPredicted RBP20.12■□□□□ 0.81
PDLIM1-202ENST00000477757 C3orf20Q8ND61 904 aa20.12■□□□□ 0.81
PDLIM1-202ENST00000477757 SP110Q9HB58 689 aa20.12■□□□□ 0.81
PDLIM1-202ENST00000477757 OAS3Q9Y6K5 1087 aaKnown RBP20.12■□□□□ 0.81
PDLIM1-202ENST00000477757 CACNA1DQ01668 2161 aa20.12■□□□□ 0.81
PDLIM1-202ENST00000477757 TRBV23OR9-2A0A075B6M9 112 aa20.11■□□□□ 0.81
PDLIM1-202ENST00000477757 DDAH2O95865 285 aa20.11■□□□□ 0.81
PDLIM1-202ENST00000477757 PRKCSHP14314 528 aaPredicted RBP20.11■□□□□ 0.81
PDLIM1-202ENST00000477757 ZNF28P17035 718 aa20.11■□□□□ 0.81
PDLIM1-202ENST00000477757 NFATC2Q13469 925 aa20.11■□□□□ 0.81
PDLIM1-202ENST00000477757 ZNF787Q6DD87 383 aa20.11■□□□□ 0.81
PDLIM1-202ENST00000477757 C6orf15Q6UXA7 325 aaPredicted RBP20.11■□□□□ 0.81
PDLIM1-202ENST00000477757 TRIM72Q6ZMU5 477 aa20.11■□□□□ 0.81
PDLIM1-202ENST00000477757 TMEM135Q86UB9 458 aa20.11■□□□□ 0.81
PDLIM1-202ENST00000477757 GALNT13Q8IUC8 556 aa20.11■□□□□ 0.81
PDLIM1-202ENST00000477757 ARHGAP12Q8IWW6 846 aa20.11■□□□□ 0.81
PDLIM1-202ENST00000477757 EPB41L1Q9H4G0 881 aa20.11■□□□□ 0.81
PDLIM1-202ENST00000477757 STN1Q9H668 368 aaKnown RBP20.11■□□□□ 0.81
PDLIM1-202ENST00000477757 KLHL3Q9UH77 587 aa20.11■□□□□ 0.81
PDLIM1-202ENST00000477757 TMEM98Q9Y2Y6 226 aa20.11■□□□□ 0.81
PDLIM1-202ENST00000477757 SHANK1Q9Y566 2161 aa20.11■□□□□ 0.81
PDLIM1-202ENST00000477757 HIVEP3Q5T1R4 2406 aa20.11■□□□□ 0.81
PDLIM1-202ENST00000477757 NPIPB15A6NHN6 443 aaPredicted RBP20.1■□□□□ 0.81
PDLIM1-202ENST00000477757 CYP2A6P11509 494 aaPredicted RBP20.1■□□□□ 0.81
PDLIM1-202ENST00000477757 NFKBIAP25963 317 aa20.1■□□□□ 0.81
PDLIM1-202ENST00000477757 NSFP46459 744 aaKnown RBP20.1■□□□□ 0.81
PDLIM1-202ENST00000477757 IL10RBQ08334 325 aa20.1■□□□□ 0.81
PDLIM1-202ENST00000477757 MARK2Q7KZI7 788 aaKnown RBP20.1■□□□□ 0.81
PDLIM1-202ENST00000477757 MAMDC2Q7Z304 686 aaPredicted RBP20.1■□□□□ 0.81
PDLIM1-202ENST00000477757 TRIM74Q86UV6 250 aa20.1■□□□□ 0.81
PDLIM1-202ENST00000477757 FAM114A1Q8IWE2 563 aa20.1■□□□□ 0.81
PDLIM1-202ENST00000477757 FNIP1Q8TF40 1166 aa20.1■□□□□ 0.81
PDLIM1-202ENST00000477757 SH3KBP1Q96B97 665 aa20.1■□□□□ 0.81
PDLIM1-202ENST00000477757 TUBGCP2Q9BSJ2 902 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms