RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 FGD3Q5JSP0 725 aa9.75□□□□□ -0.85
CMC1-209ENST00000477739 TRIM74Q86UV6 250 aa9.75□□□□□ -0.85
CMC1-209ENST00000477739 TRIM73Q86UV7 250 aa9.75□□□□□ -0.85
CMC1-209ENST00000477739 KDM1BQ8NB78 822 aa9.75□□□□□ -0.85
CMC1-209ENST00000477739 OR7D4Q8NG98 312 aa9.75□□□□□ -0.85
CMC1-209ENST00000477739 SPATA17Q96L03 361 aa9.75□□□□□ -0.85
CMC1-209ENST00000477739 FAM193BQ96PV7 902 aaPredicted RBP9.75□□□□□ -0.85
CMC1-209ENST00000477739 AGO3Q9H9G7 860 aaKnown RBP9.75□□□□□ -0.85
CMC1-209ENST00000477739 VPS45Q9NRW7 570 aa9.75□□□□□ -0.85
CMC1-209ENST00000477739 TRNAU1APQ9NX07 287 aaKnown RBP9.75□□□□□ -0.85
CMC1-209ENST00000477739 GALPQ9UBC7 116 aa9.75□□□□□ -0.85
CMC1-209ENST00000477739 FBXW11Q9UKB1 542 aa9.75□□□□□ -0.85
CMC1-209ENST00000477739 FADS3Q9Y5Q0 445 aa9.75□□□□□ -0.85
CMC1-209ENST00000477739 TRPV2Q9Y5S1 764 aa9.75□□□□□ -0.85
CMC1-209ENST00000477739 ZNF487B1APH4 448 aa9.75□□□□□ -0.85
CMC1-209ENST00000477739 PABPC4LP0CB38 370 aaKnown RBP9.75□□□□□ -0.85
CMC1-209ENST00000477739 SMIM18P0DKX4 95 aa9.75□□□□□ -0.85
CMC1-209ENST00000477739 SERPINH1P50454 418 aaKnown RBP9.75□□□□□ -0.85
CMC1-209ENST00000477739 POU4F1Q01851 419 aa9.75□□□□□ -0.85
CMC1-209ENST00000477739 INPP5AQ14642 412 aa9.75□□□□□ -0.85
CMC1-209ENST00000477739 PTPRNQ16849 979 aa9.75□□□□□ -0.85
CMC1-209ENST00000477739 POM121L1PQ3SYA9 428 aa9.75□□□□□ -0.85
CMC1-209ENST00000477739 IL27RAQ6UWB1 636 aa9.75□□□□□ -0.85
CMC1-209ENST00000477739 TMEM86AQ8N2M4 240 aa9.75□□□□□ -0.85
CMC1-209ENST00000477739 FBXO39Q8N4B4 442 aa9.75□□□□□ -0.85
CMC1-209ENST00000477739 TMCO5AQ8N6Q1 288 aa9.75□□□□□ -0.85
CMC1-209ENST00000477739 TWIST2Q8WVJ9 160 aa9.75□□□□□ -0.85
CMC1-209ENST00000477739 BEGAINQ9BUH8 593 aa9.75□□□□□ -0.85
CMC1-209ENST00000477739 IGSF9Q9P2J2 1179 aa9.75□□□□□ -0.85
CMC1-209ENST00000477739 CDH9Q9ULB4 789 aa9.75□□□□□ -0.85
CMC1-209ENST00000477739 KIAA0100Q14667 2235 aaKnown RBP9.75□□□□□ -0.85
CMC1-209ENST00000477739 HS6ST1O60243 411 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 RSL1D1O76021 490 aaKnown RBP9.74□□□□□ -0.85
CMC1-209ENST00000477739 GLP2RO95838 553 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 AKR1A1P14550 325 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 PRKCQQ04759 706 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 POLD3Q15054 466 aaPredicted RBP9.74□□□□□ -0.85
CMC1-209ENST00000477739 PGM2L1Q6PCE3 622 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 SLC2A7Q6PXP3 512 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 SLC22A15Q8IZD6 547 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 SPPL2BQ8TCT7 592 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 PRICKLE1Q96MT3 831 aaPredicted RBP9.74□□□□□ -0.85
CMC1-209ENST00000477739 C11orf84Q9BUA3 381 aaPredicted RBP9.74□□□□□ -0.85
CMC1-209ENST00000477739 MARCH7Q9H992 704 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 CXorf21Q9HAI6 301 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 RRAGCQ9HB90 399 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 RASSF1Q9NS23 344 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 INTS7Q9NVH2 962 aaKnown RBP9.74□□□□□ -0.85
CMC1-209ENST00000477739 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.74□□□□□ -0.85
CMC1-209ENST00000477739 EIF2B4Q9UI10 523 aaKnown RBP9.74□□□□□ -0.85
CMC1-209ENST00000477739 SORCS3Q9UPU3 1222 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 SMIM31A0A1B0GVY4 71 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 A8MU76 341 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 DCLK1O15075 740 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 XYLBO75191 536 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 NIPSNAP2O75323 286 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 MAGEA3P43357 314 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 NPY2RP49146 381 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 KPNA2P52292 529 aaKnown RBP9.74□□□□□ -0.85
CMC1-209ENST00000477739 UFM1P61960 85 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 CYP4F2P78329 520 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 HPCAP84074 193 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 CYP4F3Q08477 520 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 SIM2Q14190 667 aaPredicted RBP9.74□□□□□ -0.85
CMC1-209ENST00000477739 PAFAH1B3Q15102 231 aaKnown RBP9.74□□□□□ -0.85
CMC1-209ENST00000477739 ATP6AP1LQ52LC2 224 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 ACBD5Q5T8D3 534 aaPredicted RBP9.74□□□□□ -0.85
CMC1-209ENST00000477739 PAQR3Q6TCH7 311 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 GCNT7Q6ZNI0 430 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 ZMIZ2Q8NF64 920 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 ZNF419Q96HQ0 510 aaPredicted RBP9.74□□□□□ -0.85
CMC1-209ENST00000477739 ADAM2Q99965 735 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 HGH1Q9BTY7 390 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 C1orf21Q9H246 121 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 SMURF2Q9HAU4 748 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 SMOXQ9NWM0 555 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 TRHDEQ9UKU6 1024 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 ST14Q9Y5Y6 855 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 MYADML2A6NDP7 307 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 GPR182O15218 404 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 HTRA2O43464 458 aaPredicted RBP9.74□□□□□ -0.85
CMC1-209ENST00000477739 OR1I1O60431 355 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 OR4F21O95013 312 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 ZNF865P0CJ78 1059 aaPredicted RBP9.74□□□□□ -0.85
CMC1-209ENST00000477739 SLC2A3P11169 496 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 CDK4P11802 303 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 SLC2A4P14672 509 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 GEMP55040 296 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 DAB2P98082 770 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 SPIDRQ14159 915 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 GALNT18Q6P9A2 607 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 KLHL35Q6PF15 583 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 PIWIL4Q7Z3Z4 852 aaKnown RBP9.74□□□□□ -0.85
CMC1-209ENST00000477739 LINC00523Q86TU6 105 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 TMEM135Q86UB9 458 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 LRRTM3Q86VH5 581 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 RETREG3Q86VR2 466 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 FAM126BQ8IXS8 530 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 CATSPER1Q8NEC5 780 aa9.74□□□□□ -0.85
CMC1-209ENST00000477739 OR4K2Q8NGD2 314 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms