RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 MBLAC1A4D2B0 266 aaPredicted RBP14.6□□□□□ -0.07
HDAC6-220ENST00000477528 C9IYK1 514 aa14.6□□□□□ -0.07
HDAC6-220ENST00000477528 DLX3O60479 287 aa14.6□□□□□ -0.07
HDAC6-220ENST00000477528 PGM3O95394 542 aa14.6□□□□□ -0.07
HDAC6-220ENST00000477528 POLR2EP19388 210 aaKnown RBP14.6□□□□□ -0.07
HDAC6-220ENST00000477528 CACNG1Q06432 222 aa14.6□□□□□ -0.07
HDAC6-220ENST00000477528 ISLR2Q6UXK2 745 aa14.6□□□□□ -0.07
HDAC6-220ENST00000477528 DBF4BQ8NFT6 615 aa14.6□□□□□ -0.07
HDAC6-220ENST00000477528 STARD8Q92502 1023 aa14.6□□□□□ -0.07
HDAC6-220ENST00000477528 OR52B2Q96RD2 323 aa14.6□□□□□ -0.07
HDAC6-220ENST00000477528 HIPK3Q9H422 1215 aa14.6□□□□□ -0.07
HDAC6-220ENST00000477528 PCDHGC4Q9Y5F7 938 aa14.6□□□□□ -0.07
HDAC6-220ENST00000477528 ZNF865P0CJ78 1059 aaPredicted RBP14.59□□□□□ -0.07
HDAC6-220ENST00000477528 GSTT1P30711 240 aa14.59□□□□□ -0.07
HDAC6-220ENST00000477528 NR1H2P55055 460 aa14.59□□□□□ -0.07
HDAC6-220ENST00000477528 RALGDSQ12967 914 aa14.59□□□□□ -0.07
HDAC6-220ENST00000477528 TIGD2Q4W5G0 525 aa14.59□□□□□ -0.07
HDAC6-220ENST00000477528 AGMOQ6ZNB7 445 aa14.59□□□□□ -0.07
HDAC6-220ENST00000477528 CPSF7Q8N684 471 aaKnown RBP14.59□□□□□ -0.07
HDAC6-220ENST00000477528 TSPAN14Q8NG11 270 aa14.59□□□□□ -0.07
HDAC6-220ENST00000477528 KCNN1Q92952 543 aa14.59□□□□□ -0.07
HDAC6-220ENST00000477528 COPS8Q99627 209 aa14.59□□□□□ -0.07
HDAC6-220ENST00000477528 TBCDQ9BTW9 1192 aa14.59□□□□□ -0.07
HDAC6-220ENST00000477528 MRM3Q9HC36 420 aaKnown RBP14.59□□□□□ -0.07
HDAC6-220ENST00000477528 ASAH2Q9NR71 780 aa14.59□□□□□ -0.07
HDAC6-220ENST00000477528 RAD18Q9NS91 495 aa14.59□□□□□ -0.07
HDAC6-220ENST00000477528 KIAA1522Q9P206 1035 aaPredicted RBP14.59□□□□□ -0.07
HDAC6-220ENST00000477528 NEMP2A6NFY4 417 aa14.59□□□□□ -0.07
HDAC6-220ENST00000477528 TMEM88BA6NKF7 163 aa14.59□□□□□ -0.07
HDAC6-220ENST00000477528 RFTN1Q14699 578 aaPredicted RBP14.59□□□□□ -0.07
HDAC6-220ENST00000477528 TAF1AQ15573 450 aaPredicted RBP14.59□□□□□ -0.07
HDAC6-220ENST00000477528 SYTL1Q8IYJ3 562 aa14.59□□□□□ -0.07
HDAC6-220ENST00000477528 LPGAT1Q92604 370 aa14.59□□□□□ -0.07
HDAC6-220ENST00000477528 SLC2A6Q9UGQ3 507 aa14.59□□□□□ -0.07
HDAC6-220ENST00000477528 CATP04040 527 aaKnown RBP14.59□□□□□ -0.07
HDAC6-220ENST00000477528 LYNP07948 512 aa14.59□□□□□ -0.07
HDAC6-220ENST00000477528 IRF8Q02556 426 aa14.59□□□□□ -0.07
HDAC6-220ENST00000477528 ACSM2AQ08AH3 577 aa14.59□□□□□ -0.07
HDAC6-220ENST00000477528 CSTF3Q12996 717 aaKnown RBP14.59□□□□□ -0.07
HDAC6-220ENST00000477528 STARD3Q14849 445 aa14.59□□□□□ -0.07
HDAC6-220ENST00000477528 SPRED3Q2MJR0 410 aa14.59□□□□□ -0.07
HDAC6-220ENST00000477528 ACSM2BQ68CK6 577 aa14.59□□□□□ -0.07
HDAC6-220ENST00000477528 TMEM26Q6ZUK4 368 aa14.59□□□□□ -0.07
HDAC6-220ENST00000477528 SERINC5Q86VE9 423 aa14.59□□□□□ -0.07
HDAC6-220ENST00000477528 WDR60Q8WVS4 1066 aa14.59□□□□□ -0.07
HDAC6-220ENST00000477528 MTFMTQ96DP5 389 aaKnown RBP14.59□□□□□ -0.07
HDAC6-220ENST00000477528 OTUB1Q96FW1 271 aaPredicted RBP14.59□□□□□ -0.07
HDAC6-220ENST00000477528 FCRL3Q96P31 734 aaPredicted RBP14.59□□□□□ -0.07
HDAC6-220ENST00000477528 BTBD9Q96Q07 612 aa14.59□□□□□ -0.07
HDAC6-220ENST00000477528 EGFL7Q9UHF1 273 aa14.59□□□□□ -0.07
HDAC6-220ENST00000477528 UBXN8O00124 270 aa14.59□□□□□ -0.07
HDAC6-220ENST00000477528 AHCYL1O43865 530 aa14.59□□□□□ -0.07
HDAC6-220ENST00000477528 PEX1O43933 1283 aa14.59□□□□□ -0.07
HDAC6-220ENST00000477528 RECQL5O94762 991 aaPredicted RBP14.59□□□□□ -0.07
HDAC6-220ENST00000477528 ITGAXP20702 1163 aa14.59□□□□□ -0.07
HDAC6-220ENST00000477528 IMPDH1P20839 514 aa14.59□□□□□ -0.07
HDAC6-220ENST00000477528 PPM1AP35813 382 aa14.59□□□□□ -0.07
HDAC6-220ENST00000477528 CHI3L1P36222 383 aaPredicted RBP14.59□□□□□ -0.07
HDAC6-220ENST00000477528 TAZQ16635 292 aa14.59□□□□□ -0.07
HDAC6-220ENST00000477528 SYT12Q8IV01 421 aa14.59□□□□□ -0.07
HDAC6-220ENST00000477528 MAGEE2Q8TD90 523 aaPredicted RBP14.59□□□□□ -0.07
HDAC6-220ENST00000477528 DHRS4Q9BTZ2 278 aa14.59□□□□□ -0.07
HDAC6-220ENST00000477528 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.59□□□□□ -0.07
HDAC6-220ENST00000477528 TCRBV5S1A1TA0A578 114 aa14.58□□□□□ -0.07
HDAC6-220ENST00000477528 CCDC162PA2VCL2 907 aa14.58□□□□□ -0.07
HDAC6-220ENST00000477528 J3KR12 359 aa14.58□□□□□ -0.07
HDAC6-220ENST00000477528 PTGESO14684 152 aa14.58□□□□□ -0.07
HDAC6-220ENST00000477528 ZNF623O75123 536 aa14.58□□□□□ -0.07
HDAC6-220ENST00000477528 IFNA14P01570 189 aa14.58□□□□□ -0.07
HDAC6-220ENST00000477528 IL1BP01584 269 aa14.58□□□□□ -0.07
HDAC6-220ENST00000477528 PEX2P28328 305 aa14.58□□□□□ -0.07
HDAC6-220ENST00000477528 EPS8Q12929 822 aa14.58□□□□□ -0.07
HDAC6-220ENST00000477528 ACOX1Q15067 660 aa14.58□□□□□ -0.07
HDAC6-220ENST00000477528 CCDC81Q6ZN84 652 aa14.58□□□□□ -0.07
HDAC6-220ENST00000477528 GPRIN1Q7Z2K8 1008 aa14.58□□□□□ -0.07
HDAC6-220ENST00000477528 TMEM135Q86UB9 458 aa14.58□□□□□ -0.07
HDAC6-220ENST00000477528 FBXO22Q8NEZ5 403 aa14.58□□□□□ -0.07
HDAC6-220ENST00000477528 OR6K2Q8NGY2 324 aa14.58□□□□□ -0.07
HDAC6-220ENST00000477528 ROPN1LQ96C74 230 aa14.58□□□□□ -0.07
HDAC6-220ENST00000477528 ZFP14Q9HCL3 533 aa14.58□□□□□ -0.07
HDAC6-220ENST00000477528 NUDT4Q9NZJ9 180 aa14.58□□□□□ -0.07
HDAC6-220ENST00000477528 FKTNO75072 461 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 XYLBO75191 536 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 GABRR2P28476 465 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 MAGEA6P43360 314 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 RANBP1P43487 201 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 NIPAL4Q0D2K0 466 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 TRIM25Q14258 630 aaKnown RBP14.58□□□□□ -0.08
HDAC6-220ENST00000477528 SIRPB2Q5JXA9 342 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 LINGO4Q6UY18 593 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 ARHGAP36Q6ZRI8 547 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 ATG16L2Q8NAA4 619 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 ELMO1Q92556 727 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 REPS1Q96D71 796 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 TFB2MQ9H5Q4 396 aaKnown RBP14.58□□□□□ -0.08
HDAC6-220ENST00000477528 PNPLA3Q9NST1 481 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 SH3BP4Q9P0V3 963 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 RAB26Q9ULW5 256 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 TIMM22Q9Y584 194 aa14.58□□□□□ -0.08
HDAC6-220ENST00000477528 PARNO95453 639 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms