RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 OXNAD1Q96HP4 312 aaPredicted RBP13.39□□□□□ -0.27
ACTN4-205ENST00000477174 APOLD1Q96LR9 279 aa13.39□□□□□ -0.27
ACTN4-205ENST00000477174 LRRC61Q9BV99 259 aa13.39□□□□□ -0.27
ACTN4-205ENST00000477174 FRMD8P1Q9BZ68 369 aaPredicted RBP13.39□□□□□ -0.27
ACTN4-205ENST00000477174 CLPBQ9H078 707 aa13.39□□□□□ -0.27
ACTN4-205ENST00000477174 TRABDQ9H4I3 376 aa13.39□□□□□ -0.27
ACTN4-205ENST00000477174 CAAP1Q9H8G2 361 aa13.39□□□□□ -0.27
ACTN4-205ENST00000477174 PKD2L2Q9NZM6 624 aa13.39□□□□□ -0.27
ACTN4-205ENST00000477174 PPP2R2CQ9Y2T4 447 aa13.39□□□□□ -0.27
ACTN4-205ENST00000477174 AAR2Q9Y312 384 aaKnown RBP13.39□□□□□ -0.27
ACTN4-205ENST00000477174 KNTC1P50748 2209 aa13.39□□□□□ -0.27
ACTN4-205ENST00000477174 GOLGA6CA6NDK9 693 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 GOLGA6BA6NDN3 693 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 C5orf60A6NFR6 353 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 RFPL3O75679 317 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 TOP3BO95985 862 aaKnown RBP13.38□□□□□ -0.27
ACTN4-205ENST00000477174 SOD1P00441 154 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 CEACAM5P06731 702 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 GOLGA6DP0CG33 693 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 STIP1P31948 543 aaKnown RBP13.38□□□□□ -0.27
ACTN4-205ENST00000477174 ACADVLP49748 655 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 GEMP55040 296 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 DAB2P98082 770 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 E2F1Q01094 437 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 DNAJC3Q13217 504 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 C1orf61Q13536 156 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 PRPSAP1Q14558 356 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 SEL1L2Q5TEA6 688 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 TMPRSS7Q7RTY8 843 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 LYSMD3Q7Z3D4 306 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 GKN2Q86XP6 184 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 GALNT15Q8N3T1 639 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 SLC35B2Q8TB61 432 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 OR1E3Q8WZA6 343 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 GLMNQ92990 594 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 EID2BQ96D98 161 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 HIC2Q96JB3 615 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 MRGPRX2Q96LB1 330 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 SPATA13Q96N96 652 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 FAM118BQ9BPY3 351 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 RIOK2Q9BVS4 552 aaKnown RBP13.38□□□□□ -0.27
ACTN4-205ENST00000477174 BOCQ9BWV1 1114 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 GPR63Q9BZJ6 419 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 GBA3Q9H227 469 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 CARD9Q9H257 536 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 FGF22Q9HCT0 170 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 GOLGA6AQ9NYA3 693 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 HACD3Q9P035 362 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 CD84Q9UIB8 345 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 SLC17A4Q9Y2C5 497 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 MSRB2Q9Y3D2 182 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 ANKRD36A6QL64 1941 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 SPEGQ15772 3267 aa13.38□□□□□ -0.27
ACTN4-205ENST00000477174 ACACBO00763 2458 aa13.37□□□□□ -0.27
ACTN4-205ENST00000477174 COL5A1P20908 1838 aaPredicted RBP13.37□□□□□ -0.27
ACTN4-205ENST00000477174 TCRBV7S2A1N4TA0A589 114 aa13.37□□□□□ -0.27
ACTN4-205ENST00000477174 PRSS38A1L453 326 aa13.37□□□□□ -0.27
ACTN4-205ENST00000477174 GP1BAP07359 652 aa13.37□□□□□ -0.27
ACTN4-205ENST00000477174 HLA-DPA1P20036 260 aa13.37□□□□□ -0.27
ACTN4-205ENST00000477174 HMGCLP35914 325 aa13.37□□□□□ -0.27
ACTN4-205ENST00000477174 RPIAP49247 311 aa13.37□□□□□ -0.27
ACTN4-205ENST00000477174 DCDC1P59894 354 aa13.37□□□□□ -0.27
ACTN4-205ENST00000477174 SLC1A5Q15758 541 aa13.37□□□□□ -0.27
ACTN4-205ENST00000477174 SMAD1Q15797 465 aaKnown RBP13.37□□□□□ -0.27
ACTN4-205ENST00000477174 DEFB133Q30KQ1 61 aa13.37□□□□□ -0.27
ACTN4-205ENST00000477174 CCDC157Q569K6 752 aa13.37□□□□□ -0.27
ACTN4-205ENST00000477174 SIRPB2Q5JXA9 342 aa13.37□□□□□ -0.27
ACTN4-205ENST00000477174 HENMT1Q5T8I9 393 aaKnown RBP13.37□□□□□ -0.27
ACTN4-205ENST00000477174 TMPRSS12Q86WS5 348 aa13.37□□□□□ -0.27
ACTN4-205ENST00000477174 SLC13A5Q86YT5 568 aaPredicted RBP13.37□□□□□ -0.27
ACTN4-205ENST00000477174 IPMKQ8NFU5 416 aa13.37□□□□□ -0.27
ACTN4-205ENST00000477174 PDXPQ96GD0 296 aa13.37□□□□□ -0.27
ACTN4-205ENST00000477174 SCARF2Q96GP6 870 aaPredicted RBP13.37□□□□□ -0.27
ACTN4-205ENST00000477174 FSD1LQ9BXM9 530 aa13.37□□□□□ -0.27
ACTN4-205ENST00000477174 FRMD8Q9BZ67 464 aaPredicted RBP13.37□□□□□ -0.27
ACTN4-205ENST00000477174 CYP4F12Q9HCS2 524 aa13.37□□□□□ -0.27
ACTN4-205ENST00000477174 DOLKQ9UPQ8 538 aa13.37□□□□□ -0.27
ACTN4-205ENST00000477174 SHOC2Q9UQ13 582 aa13.37□□□□□ -0.27
ACTN4-205ENST00000477174 ZNF711Q9Y462 761 aa13.37□□□□□ -0.27
ACTN4-205ENST00000477174 CHD8Q9HCK8 2581 aa13.36□□□□□ -0.27
ACTN4-205ENST00000477174 GOLGA4Q13439 2230 aaKnown RBP13.36□□□□□ -0.27
ACTN4-205ENST00000477174 LY6G6EA0A0G2JKS1 128 aa13.36□□□□□ -0.27
ACTN4-205ENST00000477174 EME2A4GXA9 379 aaPredicted RBP13.36□□□□□ -0.27
ACTN4-205ENST00000477174 FUCA1P04066 466 aa13.36□□□□□ -0.27
ACTN4-205ENST00000477174 FGF1P05230 155 aa13.36□□□□□ -0.27
ACTN4-205ENST00000477174 IVLP07476 585 aa13.36□□□□□ -0.27
ACTN4-205ENST00000477174 PIRTP0C851 137 aa13.36□□□□□ -0.27
ACTN4-205ENST00000477174 SPINK2P20155 84 aa13.36□□□□□ -0.27
ACTN4-205ENST00000477174 PARP6Q2NL67 630 aa13.36□□□□□ -0.27
ACTN4-205ENST00000477174 C6orf132Q5T0Z8 1188 aa13.36□□□□□ -0.27
ACTN4-205ENST00000477174 ZDHHC20Q5W0Z9 365 aa13.36□□□□□ -0.27
ACTN4-205ENST00000477174 KCTD16Q68DU8 428 aa13.36□□□□□ -0.27
ACTN4-205ENST00000477174 DHRS13Q6UX07 377 aa13.36□□□□□ -0.27
ACTN4-205ENST00000477174 RANBP10Q6VN20 620 aa13.36□□□□□ -0.27
ACTN4-205ENST00000477174 CCNI2Q6ZMN8 369 aaPredicted RBP13.36□□□□□ -0.27
ACTN4-205ENST00000477174 CACTIN-AS1Q8N1I8 211 aa13.36□□□□□ -0.27
ACTN4-205ENST00000477174 FAM71DQ8N9W8 422 aa13.36□□□□□ -0.27
ACTN4-205ENST00000477174 CCDC110Q8TBZ0 833 aa13.36□□□□□ -0.27
ACTN4-205ENST00000477174 LRRC45Q96CN5 670 aa13.36□□□□□ -0.27
ACTN4-205ENST00000477174 COX14Q96I36 57 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms