RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 RNF31Q96EP0 1072 aa11.63□□□□□ -0.55
VARS2-208ENST00000477052 TRIM11Q96F44 468 aa11.63□□□□□ -0.55
VARS2-208ENST00000477052 SCRN2Q96FV2 425 aa11.63□□□□□ -0.55
VARS2-208ENST00000477052 GSDMCQ9BYG8 508 aa11.63□□□□□ -0.55
VARS2-208ENST00000477052 CBX8Q9HC52 389 aa11.63□□□□□ -0.55
VARS2-208ENST00000477052 CHKBQ9Y259 395 aa11.63□□□□□ -0.55
VARS2-208ENST00000477052 FLNBO75369 2602 aaKnown RBP11.62□□□□□ -0.55
VARS2-208ENST00000477052 IGHV5-10-1A0A0J9YXX1 117 aa11.62□□□□□ -0.55
VARS2-208ENST00000477052 TMX2-CTNND1H3BSU7 103 aa11.62□□□□□ -0.55
VARS2-208ENST00000477052 J3QKU1 62 aa11.62□□□□□ -0.55
VARS2-208ENST00000477052 PDE2AO00408 941 aaPredicted RBP11.62□□□□□ -0.55
VARS2-208ENST00000477052 NVLO15381 856 aaKnown RBP11.62□□□□□ -0.55
VARS2-208ENST00000477052 NUDT21O43809 227 aaKnown RBP11.62□□□□□ -0.55
VARS2-208ENST00000477052 EML2O95834 649 aa11.62□□□□□ -0.55
VARS2-208ENST00000477052 PNLIPP16233 465 aa11.62□□□□□ -0.55
VARS2-208ENST00000477052 HSPA9P38646 679 aaKnown RBP11.62□□□□□ -0.55
VARS2-208ENST00000477052 ACTR1BP42025 376 aa11.62□□□□□ -0.55
VARS2-208ENST00000477052 MLLT3P42568 568 aaPredicted RBP11.62□□□□□ -0.55
VARS2-208ENST00000477052 ZNF135P52742 658 aaPredicted RBP11.62□□□□□ -0.55
VARS2-208ENST00000477052 ACTR1AP61163 376 aa11.62□□□□□ -0.55
VARS2-208ENST00000477052 FANCCQ00597 558 aa11.62□□□□□ -0.55
VARS2-208ENST00000477052 PTSQ03393 145 aa11.62□□□□□ -0.55
VARS2-208ENST00000477052 EIF3IQ13347 325 aaKnown RBP11.62□□□□□ -0.55
VARS2-208ENST00000477052 BIRC2Q13490 618 aa11.62□□□□□ -0.55
VARS2-208ENST00000477052 PIGHQ14442 188 aaPredicted RBP11.62□□□□□ -0.55
VARS2-208ENST00000477052 TSR1Q2NL82 804 aaKnown RBP11.62□□□□□ -0.55
VARS2-208ENST00000477052 NCBP2-AS2Q69YL0 99 aa11.62□□□□□ -0.55
VARS2-208ENST00000477052 USP45Q70EL2 814 aa11.62□□□□□ -0.55
VARS2-208ENST00000477052 PIM3Q86V86 326 aa11.62□□□□□ -0.55
VARS2-208ENST00000477052 C17orf82Q86X59 251 aaPredicted RBP11.62□□□□□ -0.55
VARS2-208ENST00000477052 BBS5Q8N3I7 341 aa11.62□□□□□ -0.55
VARS2-208ENST00000477052 NSMCE1Q8WV22 266 aa11.62□□□□□ -0.55
VARS2-208ENST00000477052 TEKT4Q8WW24 435 aa11.62□□□□□ -0.55
VARS2-208ENST00000477052 AP2M1Q96CW1 435 aa11.62□□□□□ -0.55
VARS2-208ENST00000477052 MED8Q96G25 268 aa11.62□□□□□ -0.55
VARS2-208ENST00000477052 WBP1Q96G27 269 aa11.62□□□□□ -0.55
VARS2-208ENST00000477052 CCDC74BQ96LY2 380 aa11.62□□□□□ -0.55
VARS2-208ENST00000477052 MCCC1Q96RQ3 725 aaPredicted RBP11.62□□□□□ -0.55
VARS2-208ENST00000477052 CMKLR1Q99788 373 aa11.62□□□□□ -0.55
VARS2-208ENST00000477052 FUCA2Q9BTY2 467 aa11.62□□□□□ -0.55
VARS2-208ENST00000477052 RIOK2Q9BVS4 552 aaKnown RBP11.62□□□□□ -0.55
VARS2-208ENST00000477052 TRIM4Q9C037 500 aa11.62□□□□□ -0.55
VARS2-208ENST00000477052 IP6K2Q9UHH9 426 aa11.62□□□□□ -0.55
VARS2-208ENST00000477052 SLC17A4Q9Y2C5 497 aa11.62□□□□□ -0.55
VARS2-208ENST00000477052 COL6A6A6NMZ7 2263 aa11.61□□□□□ -0.55
VARS2-208ENST00000477052 SYCE3A1L190 88 aa11.61□□□□□ -0.55
VARS2-208ENST00000477052 B8ZZF3 427 aa11.61□□□□□ -0.55
VARS2-208ENST00000477052 FZD6O60353 706 aa11.61□□□□□ -0.55
VARS2-208ENST00000477052 CLDN7O95471 211 aa11.61□□□□□ -0.55
VARS2-208ENST00000477052 CPNE6O95741 557 aa11.61□□□□□ -0.55
VARS2-208ENST00000477052 ATP1A1P05023 1023 aaKnown RBP11.61□□□□□ -0.55
VARS2-208ENST00000477052 CYP1A2P05177 515 aa11.61□□□□□ -0.55
VARS2-208ENST00000477052 FAM87AP0C7U9 286 aa11.61□□□□□ -0.55
VARS2-208ENST00000477052 LIPCP11150 499 aa11.61□□□□□ -0.55
VARS2-208ENST00000477052 CSF2RBP32927 897 aa11.61□□□□□ -0.55
VARS2-208ENST00000477052 PBX1P40424 430 aa11.61□□□□□ -0.55
VARS2-208ENST00000477052 PPM1FP49593 454 aaPredicted RBP11.61□□□□□ -0.55
VARS2-208ENST00000477052 ARSDP51689 593 aa11.61□□□□□ -0.55
VARS2-208ENST00000477052 ARSEP51690 589 aa11.61□□□□□ -0.55
VARS2-208ENST00000477052 EPHB1P54762 984 aa11.61□□□□□ -0.55
VARS2-208ENST00000477052 TAS2R40P59535 323 aa11.61□□□□□ -0.55
VARS2-208ENST00000477052 NIPAL4Q0D2K0 466 aa11.61□□□□□ -0.55
VARS2-208ENST00000477052 NFATC3Q12968 1075 aa11.61□□□□□ -0.55
VARS2-208ENST00000477052 DPYSL3Q14195 570 aa11.61□□□□□ -0.55
VARS2-208ENST00000477052 MANEAQ5SRI9 462 aa11.61□□□□□ -0.55
VARS2-208ENST00000477052 CCDC122Q5T0U0 273 aa11.61□□□□□ -0.55
VARS2-208ENST00000477052 PRICKLE2Q7Z3G6 844 aa11.61□□□□□ -0.55
VARS2-208ENST00000477052 TEX26Q8N6G2 289 aa11.61□□□□□ -0.55
VARS2-208ENST00000477052 NIPA2Q8N8Q9 360 aa11.61□□□□□ -0.55
VARS2-208ENST00000477052 LPCAT1Q8NF37 534 aa11.61□□□□□ -0.55
VARS2-208ENST00000477052 SPOCK2Q92563 424 aa11.61□□□□□ -0.55
VARS2-208ENST00000477052 OR2M4Q96R27 311 aa11.61□□□□□ -0.55
VARS2-208ENST00000477052 PACSIN1Q9BY11 444 aa11.61□□□□□ -0.55
VARS2-208ENST00000477052 ARFGAP3Q9NP61 516 aa11.61□□□□□ -0.55
VARS2-208ENST00000477052 RBM22Q9NW64 420 aaKnown RBP eCLIP11.61□□□□□ -0.55
VARS2-208ENST00000477052 TRNAU1APQ9NX07 287 aaKnown RBP11.61□□□□□ -0.55
VARS2-208ENST00000477052 OAS3Q9Y6K5 1087 aaKnown RBP11.61□□□□□ -0.55
VARS2-208ENST00000477052 A0A0J9YYE9 177 aa11.6□□□□□ -0.55
VARS2-208ENST00000477052 A8MU76 341 aa11.6□□□□□ -0.55
VARS2-208ENST00000477052 SLC28A2O43868 658 aa11.6□□□□□ -0.55
VARS2-208ENST00000477052 ASMTLO95671 621 aa11.6□□□□□ -0.55
VARS2-208ENST00000477052 PRLP01236 227 aa11.6□□□□□ -0.55
VARS2-208ENST00000477052 TRBC1P01850 177 aa11.6□□□□□ -0.55
VARS2-208ENST00000477052 SERPING1P05155 500 aa11.6□□□□□ -0.55
VARS2-208ENST00000477052 HLA-DQB2P05538 268 aa11.6□□□□□ -0.55
VARS2-208ENST00000477052 IVLP07476 585 aa11.6□□□□□ -0.55
VARS2-208ENST00000477052 FGF3P11487 239 aaPredicted RBP11.6□□□□□ -0.55
VARS2-208ENST00000477052 SERPINB6P35237 376 aa11.6□□□□□ -0.55
VARS2-208ENST00000477052 GARSP41250 739 aaKnown RBP11.6□□□□□ -0.55
VARS2-208ENST00000477052 UBASH3AP57075 661 aa11.6□□□□□ -0.55
VARS2-208ENST00000477052 GBE1Q04446 702 aa11.6□□□□□ -0.55
VARS2-208ENST00000477052 GALNT2Q10471 571 aa11.6□□□□□ -0.55
VARS2-208ENST00000477052 SLC10A2Q12908 348 aaPredicted RBP11.6□□□□□ -0.55
VARS2-208ENST00000477052 PYCR3Q53H96 274 aa11.6□□□□□ -0.55
VARS2-208ENST00000477052 ANKRD20A8PQ5CZ79 823 aa11.6□□□□□ -0.55
VARS2-208ENST00000477052 SNAP47Q5SQN1 464 aa11.6□□□□□ -0.55
VARS2-208ENST00000477052 ZNF648Q5T619 568 aaPredicted RBP11.6□□□□□ -0.55
VARS2-208ENST00000477052 ALKBH5Q6P6C2 394 aaKnown RBP11.6□□□□□ -0.55
VARS2-208ENST00000477052 ADAMTSL4Q6UY14 1074 aa11.6□□□□□ -0.55
VARS2-208ENST00000477052 B4GALNT4Q76KP1 1039 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms