RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 MAP7Q14244 749 aa11.32□□□□□ -0.6
BRCA1-213ENST00000476777 MAN2A1Q16706 1144 aa11.32□□□□□ -0.6
BRCA1-213ENST00000476777 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.32□□□□□ -0.6
BRCA1-213ENST00000476777 SFRP1Q8N474 314 aa11.32□□□□□ -0.6
BRCA1-213ENST00000476777 SLC30A5Q8TAD4 765 aa11.32□□□□□ -0.6
BRCA1-213ENST00000476777 SLC37A2Q8TED4 501 aa11.32□□□□□ -0.6
BRCA1-213ENST00000476777 SLC20A1Q8WUM9 679 aa11.32□□□□□ -0.6
BRCA1-213ENST00000476777 SPOCK2Q92563 424 aa11.32□□□□□ -0.6
BRCA1-213ENST00000476777 DTD2Q96FN9 168 aa11.32□□□□□ -0.6
BRCA1-213ENST00000476777 CELF6Q96J87 481 aaKnown RBP11.32□□□□□ -0.6
BRCA1-213ENST00000476777 SLC38A3Q99624 504 aa11.32□□□□□ -0.6
BRCA1-213ENST00000476777 C11orf70Q9BRQ4 267 aa11.32□□□□□ -0.6
BRCA1-213ENST00000476777 TLK1Q9UKI8 766 aa11.32□□□□□ -0.6
BRCA1-213ENST00000476777 FZD10Q9ULW2 581 aa11.32□□□□□ -0.6
BRCA1-213ENST00000476777 SEC16AO15027 2179 aa11.32□□□□□ -0.6
BRCA1-213ENST00000476777 TNRC6AQ8NDV7 1962 aaKnown RBP11.32□□□□□ -0.6
BRCA1-213ENST00000476777 TRBV23OR9-2A0A075B6M9 112 aa11.31□□□□□ -0.6
BRCA1-213ENST00000476777 TTLL8A6PVC2 850 aa11.31□□□□□ -0.6
BRCA1-213ENST00000476777 F8VZ95 297 aa11.31□□□□□ -0.6
BRCA1-213ENST00000476777 POLR1CO15160 346 aaPredicted RBP11.31□□□□□ -0.6
BRCA1-213ENST00000476777 RFPL1O75677 317 aa11.31□□□□□ -0.6
BRCA1-213ENST00000476777 HEXIM1O94992 359 aaKnown RBP11.31□□□□□ -0.6
BRCA1-213ENST00000476777 EML2O95834 649 aa11.31□□□□□ -0.6
BRCA1-213ENST00000476777 UCHL3P15374 230 aa11.31□□□□□ -0.6
BRCA1-213ENST00000476777 CHRNB2P17787 502 aa11.31□□□□□ -0.6
BRCA1-213ENST00000476777 GPD1P21695 349 aa11.31□□□□□ -0.6
BRCA1-213ENST00000476777 PPM1FP49593 454 aaPredicted RBP11.31□□□□□ -0.6
BRCA1-213ENST00000476777 SCNN1BP51168 640 aa11.31□□□□□ -0.6
BRCA1-213ENST00000476777 PMS2P54278 862 aa11.31□□□□□ -0.6
BRCA1-213ENST00000476777 FMO1Q01740 532 aa11.31□□□□□ -0.6
BRCA1-213ENST00000476777 PTP4A2Q12974 167 aa11.31□□□□□ -0.6
BRCA1-213ENST00000476777 ERV3-1Q14264 604 aa11.31□□□□□ -0.6
BRCA1-213ENST00000476777 PYCR3Q53H96 274 aa11.31□□□□□ -0.6
BRCA1-213ENST00000476777 MIIPQ5JXC2 388 aa11.31□□□□□ -0.6
BRCA1-213ENST00000476777 DENND2CQ68D51 928 aa11.31□□□□□ -0.6
BRCA1-213ENST00000476777 RAET1GQ6H3X3 334 aa11.31□□□□□ -0.6
BRCA1-213ENST00000476777 SCYL2Q6P3W7 929 aa11.31□□□□□ -0.6
BRCA1-213ENST00000476777 WDR59Q6PJI9 974 aa11.31□□□□□ -0.6
BRCA1-213ENST00000476777 DOK6Q6PKX4 331 aa11.31□□□□□ -0.6
BRCA1-213ENST00000476777 HSD11B1LQ7Z5J1 315 aa11.31□□□□□ -0.6
BRCA1-213ENST00000476777 TMEM135Q86UB9 458 aa11.31□□□□□ -0.6
BRCA1-213ENST00000476777 ZNF677Q86XU0 584 aa11.31□□□□□ -0.6
BRCA1-213ENST00000476777 EFCAB3Q8N7B9 438 aa11.31□□□□□ -0.6
BRCA1-213ENST00000476777 PAF1Q8N7H5 531 aa11.31□□□□□ -0.6
BRCA1-213ENST00000476777 CPT1CQ8TCG5 803 aa11.31□□□□□ -0.6
BRCA1-213ENST00000476777 NCSTNQ92542 709 aa11.31□□□□□ -0.6
BRCA1-213ENST00000476777 OR2M4Q96R27 311 aa11.31□□□□□ -0.6
BRCA1-213ENST00000476777 CINPQ9BW66 212 aaPredicted RBP11.31□□□□□ -0.6
BRCA1-213ENST00000476777 STK33Q9BYT3 514 aa11.31□□□□□ -0.6
BRCA1-213ENST00000476777 SLC39A8Q9C0K1 460 aa11.31□□□□□ -0.6
BRCA1-213ENST00000476777 NDST4Q9H3R1 872 aa11.31□□□□□ -0.6
BRCA1-213ENST00000476777 IGSF5Q9NSI5 407 aa11.31□□□□□ -0.6
BRCA1-213ENST00000476777 CUEDC1Q9NWM3 386 aaPredicted RBP11.31□□□□□ -0.6
BRCA1-213ENST00000476777 SIDT1Q9NXL6 827 aaKnown RBP11.31□□□□□ -0.6
BRCA1-213ENST00000476777 KCTD5Q9NXV2 234 aa11.31□□□□□ -0.6
BRCA1-213ENST00000476777 POLHQ9Y253 713 aa11.31□□□□□ -0.6
BRCA1-213ENST00000476777 TMEM98Q9Y2Y6 226 aa11.31□□□□□ -0.6
BRCA1-213ENST00000476777 PCDHB3Q9Y5E6 796 aa11.31□□□□□ -0.6
BRCA1-213ENST00000476777 CELSR1Q9NYQ6 3014 aa11.3□□□□□ -0.6
BRCA1-213ENST00000476777 A1L4Q6 167 aa11.3□□□□□ -0.6
BRCA1-213ENST00000476777 TTC24A2A3L6 582 aaPredicted RBP11.3□□□□□ -0.6
BRCA1-213ENST00000476777 GOLGA6CA6NDK9 693 aa11.3□□□□□ -0.6
BRCA1-213ENST00000476777 GOLGA6BA6NDN3 693 aa11.3□□□□□ -0.6
BRCA1-213ENST00000476777 ARHGAP42A6NI28 874 aa11.3□□□□□ -0.6
BRCA1-213ENST00000476777 CCP110O43303 1012 aa11.3□□□□□ -0.6
BRCA1-213ENST00000476777 HTRA2O43464 458 aaPredicted RBP11.3□□□□□ -0.6
BRCA1-213ENST00000476777 MAP3K6O95382 1288 aa11.3□□□□□ -0.6
BRCA1-213ENST00000476777 SOD1P00441 154 aa11.3□□□□□ -0.6
BRCA1-213ENST00000476777 GOLGA6DP0CG33 693 aa11.3□□□□□ -0.6
BRCA1-213ENST00000476777 ZNF28P17035 718 aa11.3□□□□□ -0.6
BRCA1-213ENST00000476777 LHCGRP22888 699 aa11.3□□□□□ -0.6
BRCA1-213ENST00000476777 VIPR1P32241 457 aa11.3□□□□□ -0.6
BRCA1-213ENST00000476777 DLSTP36957 453 aa11.3□□□□□ -0.6
BRCA1-213ENST00000476777 GSCP56915 257 aaPredicted RBP11.3□□□□□ -0.6
BRCA1-213ENST00000476777 AP1S1P61966 158 aa11.3□□□□□ -0.6
BRCA1-213ENST00000476777 CDR2Q01850 454 aa11.3□□□□□ -0.6
BRCA1-213ENST00000476777 VWA3BQ502W6 1294 aa11.3□□□□□ -0.6
BRCA1-213ENST00000476777 ZNF787Q6DD87 383 aa11.3□□□□□ -0.6
BRCA1-213ENST00000476777 ARHGAP36Q6ZRI8 547 aa11.3□□□□□ -0.6
BRCA1-213ENST00000476777 Q6ZVL8 140 aa11.3□□□□□ -0.6
BRCA1-213ENST00000476777 ULBP3Q9BZM4 244 aa11.3□□□□□ -0.6
BRCA1-213ENST00000476777 SARS2Q9NP81 518 aaKnown RBP11.3□□□□□ -0.6
BRCA1-213ENST00000476777 GOLGA6AQ9NYA3 693 aa11.3□□□□□ -0.6
BRCA1-213ENST00000476777 DONSONQ9NYP3 566 aa11.3□□□□□ -0.6
BRCA1-213ENST00000476777 CROTQ9UKG9 612 aa11.3□□□□□ -0.6
BRCA1-213ENST00000476777 CCDC168Q8NDH2 2452 aa11.3□□□□□ -0.6
BRCA1-213ENST00000476777 CNTRLQ7Z7A1 2325 aa11.3□□□□□ -0.6
BRCA1-213ENST00000476777 ADGRG4Q8IZF6 3080 aa11.29□□□□□ -0.6
BRCA1-213ENST00000476777 PSMD11O00231 422 aa11.29□□□□□ -0.6
BRCA1-213ENST00000476777 UNGP13051 313 aaPredicted RBP11.29□□□□□ -0.6
BRCA1-213ENST00000476777 HTR7P34969 479 aa11.29□□□□□ -0.6
BRCA1-213ENST00000476777 NOP2P46087 812 aaKnown RBP11.29□□□□□ -0.6
BRCA1-213ENST00000476777 ZNF143P52747 638 aaPredicted RBP11.29□□□□□ -0.6
BRCA1-213ENST00000476777 AIF1P55008 147 aa11.29□□□□□ -0.6
BRCA1-213ENST00000476777 TPI1P60174 286 aa11.29□□□□□ -0.6
BRCA1-213ENST00000476777 HHEXQ03014 270 aa11.29□□□□□ -0.6
BRCA1-213ENST00000476777 DPTQ07507 201 aa11.29□□□□□ -0.6
BRCA1-213ENST00000476777 NFATC2Q13469 925 aa11.29□□□□□ -0.6
BRCA1-213ENST00000476777 LRP8Q14114 963 aa11.29□□□□□ -0.6
BRCA1-213ENST00000476777 RFTN1Q14699 578 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms