RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 CCDC96Q2M329 555 aa6.01□□□□□ -1.45
VPS50-212ENST00000476413 SHFQ7M4L6 423 aa6.01□□□□□ -1.45
VPS50-212ENST00000476413 DNAJC10Q8IXB1 793 aa6.01□□□□□ -1.45
VPS50-212ENST00000476413 NRACQ8N912 160 aa6.01□□□□□ -1.45
VPS50-212ENST00000476413 HARBI1Q96MB7 349 aa6.01□□□□□ -1.45
VPS50-212ENST00000476413 GCNAQ96QF7 691 aa6.01□□□□□ -1.45
VPS50-212ENST00000476413 NDST4Q9H3R1 872 aa6.01□□□□□ -1.45
VPS50-212ENST00000476413 PIGMQ9H3S5 423 aa6.01□□□□□ -1.45
VPS50-212ENST00000476413 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.01□□□□□ -1.45
VPS50-212ENST00000476413 MARCH4Q9P2E8 410 aaPredicted RBP6.01□□□□□ -1.45
VPS50-212ENST00000476413 COPG2Q9UBF2 871 aa6.01□□□□□ -1.45
VPS50-212ENST00000476413 FBXW11Q9UKB1 542 aa6.01□□□□□ -1.45
VPS50-212ENST00000476413 RCOR1Q9UKL0 485 aa6.01□□□□□ -1.45
VPS50-212ENST00000476413 PLAGL1Q9UM63 463 aa6.01□□□□□ -1.45
VPS50-212ENST00000476413 EXO1Q9UQ84 846 aaKnown RBP6.01□□□□□ -1.45
VPS50-212ENST00000476413 A0A1B0GVM2 712 aa6□□□□□ -1.45
VPS50-212ENST00000476413 H3BQ06 376 aaPredicted RBP6□□□□□ -1.45
VPS50-212ENST00000476413 HSPA12AO43301 675 aa6□□□□□ -1.45
VPS50-212ENST00000476413 RGS14O43566 566 aa6□□□□□ -1.45
VPS50-212ENST00000476413 DKC1O60832 514 aaKnown RBP eCLIP6□□□□□ -1.45
VPS50-212ENST00000476413 VNN2O95498 520 aa6□□□□□ -1.45
VPS50-212ENST00000476413 ACTN1P12814 892 aa6□□□□□ -1.45
VPS50-212ENST00000476413 MMP9P14780 707 aa6□□□□□ -1.45
VPS50-212ENST00000476413 TBXAS1P24557 533 aaPredicted RBP6□□□□□ -1.45
VPS50-212ENST00000476413 HOXC9P31274 260 aa6□□□□□ -1.45
VPS50-212ENST00000476413 GPR143P51810 404 aa6□□□□□ -1.45
VPS50-212ENST00000476413 C21orf58P58505 322 aa6□□□□□ -1.45
VPS50-212ENST00000476413 CXCL9Q07325 125 aa6□□□□□ -1.45
VPS50-212ENST00000476413 TNFAIP1Q13829 316 aa6□□□□□ -1.45
VPS50-212ENST00000476413 BAATQ14032 418 aaPredicted RBP6□□□□□ -1.45
VPS50-212ENST00000476413 ETFDHQ16134 617 aa6□□□□□ -1.45
VPS50-212ENST00000476413 GGNBP1Q5YKI7 109 aa6□□□□□ -1.45
VPS50-212ENST00000476413 METTL2BQ6P1Q9 378 aaKnown RBP6□□□□□ -1.45
VPS50-212ENST00000476413 Q6ZTK2 550 aa6□□□□□ -1.45
VPS50-212ENST00000476413 DNAAF5Q86Y56 855 aa6□□□□□ -1.45
VPS50-212ENST00000476413 PALB2Q86YC2 1186 aa6□□□□□ -1.45
VPS50-212ENST00000476413 SCYL3Q8IZE3 742 aa6□□□□□ -1.45
VPS50-212ENST00000476413 MIGA1Q8NAN2 632 aa6□□□□□ -1.45
VPS50-212ENST00000476413 OR8K5Q8NH50 307 aa6□□□□□ -1.45
VPS50-212ENST00000476413 RPL36ALQ969Q0 106 aaKnown RBP6□□□□□ -1.45
VPS50-212ENST00000476413 METTL2AQ96IZ6 378 aaKnown RBP6□□□□□ -1.45
VPS50-212ENST00000476413 CEP295NLQ96MC4 621 aa6□□□□□ -1.45
VPS50-212ENST00000476413 NLRP4Q96MN2 994 aa6□□□□□ -1.45
VPS50-212ENST00000476413 TMEM79Q9BSE2 394 aa6□□□□□ -1.45
VPS50-212ENST00000476413 C1QTNF1Q9BXJ1 281 aa6□□□□□ -1.45
VPS50-212ENST00000476413 KLHL4Q9C0H6 718 aa6□□□□□ -1.45
VPS50-212ENST00000476413 ACSS1Q9NUB1 689 aaPredicted RBP6□□□□□ -1.45
VPS50-212ENST00000476413 TINAGQ9UJW2 476 aa6□□□□□ -1.45
VPS50-212ENST00000476413 COL3A1P02461 1466 aaPredicted RBP6□□□□□ -1.45
VPS50-212ENST00000476413 LOC102723996A0A087X1L8 192 aa5.99□□□□□ -1.45
VPS50-212ENST00000476413 DDX5P17844 614 aaKnown RBP5.99□□□□□ -1.45
VPS50-212ENST00000476413 PRCPP42785 496 aa5.99□□□□□ -1.45
VPS50-212ENST00000476413 RAD23BP54727 409 aa5.99□□□□□ -1.45
VPS50-212ENST00000476413 ECT2LQ008S8 904 aa5.99□□□□□ -1.45
VPS50-212ENST00000476413 CALD1Q05682 793 aaKnown RBP5.99□□□□□ -1.45
VPS50-212ENST00000476413 GRAPQ13588 217 aa5.99□□□□□ -1.45
VPS50-212ENST00000476413 DLG2Q15700 870 aa5.99□□□□□ -1.45
VPS50-212ENST00000476413 PNLIPRP3Q17RR3 467 aa5.99□□□□□ -1.45
VPS50-212ENST00000476413 TMEM266Q2M3C6 531 aa5.99□□□□□ -1.45
VPS50-212ENST00000476413 PRTGQ2VWP7 1150 aa5.99□□□□□ -1.45
VPS50-212ENST00000476413 ZNF805Q5CZA5 627 aa5.99□□□□□ -1.45
VPS50-212ENST00000476413 KRT79Q5XKE5 535 aa5.99□□□□□ -1.45
VPS50-212ENST00000476413 ADALQ6DHV7 355 aa5.99□□□□□ -1.45
VPS50-212ENST00000476413 SIGIRRQ6IA17 410 aa5.99□□□□□ -1.45
VPS50-212ENST00000476413 KRT77Q7Z794 578 aa5.99□□□□□ -1.45
VPS50-212ENST00000476413 SDCCAG8Q86SQ7 713 aaPredicted RBP5.99□□□□□ -1.45
VPS50-212ENST00000476413 CRAMP1Q96RY5 1269 aa5.99□□□□□ -1.45
VPS50-212ENST00000476413 KIFC3Q9BVG8 833 aa5.99□□□□□ -1.45
VPS50-212ENST00000476413 SLITRK6Q9H5Y7 841 aa5.99□□□□□ -1.45
VPS50-212ENST00000476413 SEBOXQ9HB31 216 aaPredicted RBP5.99□□□□□ -1.45
VPS50-212ENST00000476413 ACSL5Q9ULC5 683 aa5.99□□□□□ -1.45
VPS50-212ENST00000476413 CDC14AQ9UNH5 594 aa5.99□□□□□ -1.45
VPS50-212ENST00000476413 IGHV4-28A0A0C4DH34 117 aa5.98□□□□□ -1.45
VPS50-212ENST00000476413 LNP1A1A4G5 178 aa5.98□□□□□ -1.45
VPS50-212ENST00000476413 ITM2AO43736 263 aa5.98□□□□□ -1.45
VPS50-212ENST00000476413 ZIC3O60481 467 aa5.98□□□□□ -1.45
VPS50-212ENST00000476413 DDNO94850 711 aaPredicted RBP5.98□□□□□ -1.45
VPS50-212ENST00000476413 HIST1H2ABP04908 130 aa5.98□□□□□ -1.45
VPS50-212ENST00000476413 CYP1A2P05177 515 aa5.98□□□□□ -1.45
VPS50-212ENST00000476413 NAGAP17050 411 aa5.98□□□□□ -1.45
VPS50-212ENST00000476413 HIST1H2ADP20671 130 aa5.98□□□□□ -1.45
VPS50-212ENST00000476413 UBA1P22314 1058 aaKnown RBP5.98□□□□□ -1.45
VPS50-212ENST00000476413 MMP14P50281 582 aa5.98□□□□□ -1.45
VPS50-212ENST00000476413 MXI1P50539 228 aa5.98□□□□□ -1.45
VPS50-212ENST00000476413 STAT2P52630 851 aa5.98□□□□□ -1.45
VPS50-212ENST00000476413 PPATQ06203 517 aa5.98□□□□□ -1.45
VPS50-212ENST00000476413 SREBF2Q12772 1141 aa5.98□□□□□ -1.45
VPS50-212ENST00000476413 CDC16Q13042 620 aa5.98□□□□□ -1.45
VPS50-212ENST00000476413 GPS2Q13227 327 aa5.98□□□□□ -1.45
VPS50-212ENST00000476413 FAM133BQ5BKY9 247 aaKnown RBP5.98□□□□□ -1.45
VPS50-212ENST00000476413 PPP6R3Q5H9R7 873 aaPredicted RBP5.98□□□□□ -1.45
VPS50-212ENST00000476413 ARMC3Q5W041 872 aa5.98□□□□□ -1.45
VPS50-212ENST00000476413 HIST3H2AQ7L7L0 130 aa5.98□□□□□ -1.45
VPS50-212ENST00000476413 CACNA2D4Q7Z3S7 1137 aa5.98□□□□□ -1.45
VPS50-212ENST00000476413 MRPL10Q7Z7H8 261 aaKnown RBP5.98□□□□□ -1.45
VPS50-212ENST00000476413 NRROSQ86YC3 692 aa5.98□□□□□ -1.45
VPS50-212ENST00000476413 MINDY1Q8N5J2 469 aa5.98□□□□□ -1.45
VPS50-212ENST00000476413 DENND1AQ8TEH3 1009 aa5.98□□□□□ -1.45
VPS50-212ENST00000476413 DUSP19Q8WTR2 217 aa5.98□□□□□ -1.45
VPS50-212ENST00000476413 RHBDF1Q96CC6 855 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms