RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 SLC25A52Q3SY17 297 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 LIPMQ5VYY2 423 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 B3GNT9Q6UX72 402 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 RNF19BQ6ZMZ0 732 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 GLT6D1Q7Z4J2 308 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 TMEM173Q86WV6 379 aaPredicted RBP4.98□□□□□ -1.61
CCDC39-204ENST00000476379 MAB21L3Q8N8X9 362 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 PCYOX1LQ8NBM8 494 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 TRIM63Q969Q1 353 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 MED8Q96G25 268 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 EBPLQ9BY08 206 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 ATG10Q9H0Y0 220 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 ABCB10Q9NRK6 738 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.98□□□□□ -1.61
CCDC39-204ENST00000476379 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.98□□□□□ -1.61
CCDC39-204ENST00000476379 SELENONQ9NZV5 590 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 EIF2B4Q9UI10 523 aaKnown RBP4.98□□□□□ -1.61
CCDC39-204ENST00000476379 POLR3HQ9Y535 204 aaPredicted RBP4.98□□□□□ -1.61
CCDC39-204ENST00000476379 HMX2A2RU54 273 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 H0Y858 1186 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 M0R3G1 203 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 ARVCFO00192 962 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 PLOD2O00469 737 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 LDB2O43679 373 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 AHCYL1O43865 530 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 OR1I1O60431 355 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 RAMP2O60895 175 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 SEC22BO75396 215 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 OR4F21O95013 312 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 UGT1A1P22309 533 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 UGT1A4P22310 534 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 ITPKAP23677 461 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 AZGP1P25311 298 aaKnown RBP4.98□□□□□ -1.61
CCDC39-204ENST00000476379 ELK4P28324 431 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 TPP2P29144 1249 aaPredicted RBP4.98□□□□□ -1.61
CCDC39-204ENST00000476379 UGT1A3P35503 534 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 UGT1A5P35504 534 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 SKIV2L2P42285 1042 aaKnown RBP4.98□□□□□ -1.61
CCDC39-204ENST00000476379 ETV4P43268 484 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 ACADSBP45954 432 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 ARSDP51689 593 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 NEK2P51955 445 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 LIMK2P53671 638 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 TBX4P57082 545 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 INPP5AQ14642 412 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 SF1Q15637 639 aaKnown RBP4.98□□□□□ -1.61
CCDC39-204ENST00000476379 TRIM16LQ309B1 348 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 C9orf50Q5SZB4 431 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 ATXN7L2Q5T6C5 722 aaPredicted RBP4.98□□□□□ -1.61
CCDC39-204ENST00000476379 LHX8Q68G74 356 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 MBOAT1Q6ZNC8 495 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 MAVSQ7Z434 540 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 ADCK1Q86TW2 530 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 SYTL1Q8IYJ3 562 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 KIAA2013Q8IYS2 634 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 PHACTR4Q8IZ21 702 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 CASP10Q92851 521 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 KLHL32Q96NJ5 620 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 TRAPPC9Q96Q05 1148 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 GPR21Q99679 349 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 CINPQ9BW66 212 aaPredicted RBP4.98□□□□□ -1.61
CCDC39-204ENST00000476379 TNKS2Q9H2K2 1166 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 FZD8Q9H461 694 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 TOR3AQ9H497 397 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 ST6GALNAC4Q9H4F1 302 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 EML4Q9HC35 981 aaKnown RBP4.98□□□□□ -1.61
CCDC39-204ENST00000476379 VTA1Q9NP79 307 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 MIOSQ9NXC5 875 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 SLAMF8Q9P0V8 285 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 GMIPQ9P107 970 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 MARCH4Q9P2E8 410 aaPredicted RBP4.98□□□□□ -1.61
CCDC39-204ENST00000476379 GALPQ9UBC7 116 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 TRMT6Q9UJA5 497 aaKnown RBP4.98□□□□□ -1.61
CCDC39-204ENST00000476379 MID2Q9UJV3 735 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 ZNF180Q9UJW8 692 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 MYRFQ9Y2G1 1151 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 LRRC42Q9Y546 428 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 KIF13BQ9NQT8 1826 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 A0A0D9SEW6 157 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 hCG_2039718K7EN88 272 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 CDC7O00311 574 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 TFECO14948 347 aaPredicted RBP4.98□□□□□ -1.61
CCDC39-204ENST00000476379 RECQL5O94762 991 aaPredicted RBP4.98□□□□□ -1.61
CCDC39-204ENST00000476379 STBD1O95210 358 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 FTH1P02794 183 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 CKMP06732 381 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 SNRPB2P08579 225 aaKnown RBP4.98□□□□□ -1.61
CCDC39-204ENST00000476379 ALPIP09923 528 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 SLC2A3P11169 496 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 ZNF182P17025 639 aaPredicted RBP4.98□□□□□ -1.61
CCDC39-204ENST00000476379 GLDCP23378 1020 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 FASP25445 335 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 PCSK1P29120 753 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 PRDX3P30048 256 aaKnown RBP4.98□□□□□ -1.61
CCDC39-204ENST00000476379 PBX2P40425 430 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 CLK1P49759 484 aaKnown RBP4.98□□□□□ -1.61
CCDC39-204ENST00000476379 PGFP49763 221 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 KCNQ1P51787 676 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 RAD23AP54725 363 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 GRB7Q14451 532 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms