RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 MOSPD1Q9UJG1 213 aa21.1■□□□□ 0.97
LIME1-204ENST00000476183 DNPEPQ9ULA0 475 aa21.1■□□□□ 0.97
LIME1-204ENST00000476183 DOLKQ9UPQ8 538 aa21.1■□□□□ 0.97
LIME1-204ENST00000476183 C1orf232A0A0U1RR37 186 aa21.09■□□□□ 0.97
LIME1-204ENST00000476183 MACROD2A1Z1Q3 448 aa21.09■□□□□ 0.97
LIME1-204ENST00000476183 PDE2AO00408 941 aaPredicted RBP21.09■□□□□ 0.97
LIME1-204ENST00000476183 CASC3O15234 703 aaKnown RBP21.09■□□□□ 0.97
LIME1-204ENST00000476183 KRT37O76014 449 aa21.09■□□□□ 0.97
LIME1-204ENST00000476183 MT-CO3P00414 261 aa21.09■□□□□ 0.97
LIME1-204ENST00000476183 GPR1P46091 355 aa21.09■□□□□ 0.97
LIME1-204ENST00000476183 POLD2P49005 469 aa21.09■□□□□ 0.97
LIME1-204ENST00000476183 COPS2P61201 443 aa21.09■□□□□ 0.97
LIME1-204ENST00000476183 SLC14A2Q15849 920 aa21.09■□□□□ 0.97
LIME1-204ENST00000476183 CDCP2Q5VXM1 449 aa21.09■□□□□ 0.97
LIME1-204ENST00000476183 AADACL2Q6P093 401 aa21.09■□□□□ 0.97
LIME1-204ENST00000476183 ADAMTSL4Q6UY14 1074 aa21.09■□□□□ 0.97
LIME1-204ENST00000476183 NLRP8Q86W28 1048 aa21.09■□□□□ 0.97
LIME1-204ENST00000476183 GKN2Q86XP6 184 aa21.09■□□□□ 0.97
LIME1-204ENST00000476183 NRSN1Q8IZ57 195 aa21.09■□□□□ 0.97
LIME1-204ENST00000476183 SDR16C5Q8N3Y7 309 aa21.09■□□□□ 0.97
LIME1-204ENST00000476183 PDCD7Q8N8D1 485 aaKnown RBP21.09■□□□□ 0.97
LIME1-204ENST00000476183 DCBLD1Q8N8Z6 715 aa21.09■□□□□ 0.97
LIME1-204ENST00000476183 KYQ8NBH2 561 aa21.09■□□□□ 0.97
LIME1-204ENST00000476183 EID2BQ96D98 161 aa21.09■□□□□ 0.97
LIME1-204ENST00000476183 RIOK2Q9BVS4 552 aaKnown RBP21.09■□□□□ 0.97
LIME1-204ENST00000476183 ADGRE3Q9BY15 652 aa21.09■□□□□ 0.97
LIME1-204ENST00000476183 CCDC86Q9H6F5 360 aaKnown RBP21.09■□□□□ 0.97
LIME1-204ENST00000476183 C10orf88Q9H8K7 445 aa21.09■□□□□ 0.97
LIME1-204ENST00000476183 EVA1BQ9NVM1 165 aa21.09■□□□□ 0.97
LIME1-204ENST00000476183 UBP1Q9NZI7 540 aa21.09■□□□□ 0.97
LIME1-204ENST00000476183 GPR34Q9UPC5 381 aa21.09■□□□□ 0.97
LIME1-204ENST00000476183 CLCA2Q9UQC9 943 aa21.09■□□□□ 0.97
LIME1-204ENST00000476183 CFAP47Q6ZTR5 3102 aa21.09■□□□□ 0.97
LIME1-204ENST00000476183 DSPP15924 2871 aaKnown RBP21.09■□□□□ 0.97
LIME1-204ENST00000476183 COL27A1Q8IZC6 1860 aaPredicted RBP21.09■□□□□ 0.97
LIME1-204ENST00000476183 CCDC66A2RUB6 948 aa21.08■□□□□ 0.97
LIME1-204ENST00000476183 APOC4-APOC2K7ER74 178 aa21.08■□□□□ 0.97
LIME1-204ENST00000476183 APOC2P02655 101 aa21.08■□□□□ 0.97
LIME1-204ENST00000476183 PIRTP0C851 137 aa21.08■□□□□ 0.97
LIME1-204ENST00000476183 RWDD2BP57060 319 aa21.08■□□□□ 0.97
LIME1-204ENST00000476183 CDK18Q07002 472 aa21.08■□□□□ 0.97
LIME1-204ENST00000476183 NOMO1Q15155 1222 aa21.08■□□□□ 0.97
LIME1-204ENST00000476183 LYSMD3Q7Z3D4 306 aa21.08■□□□□ 0.97
LIME1-204ENST00000476183 SFTPA2Q8IWL1 248 aa21.08■□□□□ 0.97
LIME1-204ENST00000476183 ZNF567Q8N184 647 aa21.08■□□□□ 0.97
LIME1-204ENST00000476183 CACTIN-AS1Q8N1I8 211 aa21.08■□□□□ 0.97
LIME1-204ENST00000476183 ARL10Q8N8L6 244 aa21.08■□□□□ 0.97
LIME1-204ENST00000476183 MAPK15Q8TD08 544 aa21.08■□□□□ 0.97
LIME1-204ENST00000476183 SCG3Q8WXD2 468 aaKnown RBP21.08■□□□□ 0.97
LIME1-204ENST00000476183 GLMNQ92990 594 aa21.08■□□□□ 0.97
LIME1-204ENST00000476183 OSBPL8Q9BZF1 889 aa21.08■□□□□ 0.97
LIME1-204ENST00000476183 SUDS3Q9H7L9 328 aaPredicted RBP21.08■□□□□ 0.97
LIME1-204ENST00000476183 CARS2Q9HA77 564 aaKnown RBP21.08■□□□□ 0.97
LIME1-204ENST00000476183 GULP1Q9UBP9 304 aa21.08■□□□□ 0.97
LIME1-204ENST00000476183 PADI4Q9UM07 663 aa21.08■□□□□ 0.97
LIME1-204ENST00000476183 SUFUQ9UMX1 484 aa21.08■□□□□ 0.97
LIME1-204ENST00000476183 SLC17A4Q9Y2C5 497 aa21.08■□□□□ 0.97
LIME1-204ENST00000476183 SRRM3A6NNA2 597 aaPredicted RBP21.07■□□□□ 0.96
LIME1-204ENST00000476183 HACD1B0YJ81 288 aa21.07■□□□□ 0.96
LIME1-204ENST00000476183 PMPCBO75439 489 aa21.07■□□□□ 0.96
LIME1-204ENST00000476183 PYGMP11217 842 aa21.07■□□□□ 0.96
LIME1-204ENST00000476183 NFKB1P19838 968 aa21.07■□□□□ 0.96
LIME1-204ENST00000476183 PTPN7P35236 360 aa21.07■□□□□ 0.96
LIME1-204ENST00000476183 SPINT3P49223 89 aa21.07■□□□□ 0.96
LIME1-204ENST00000476183 RPIAP49247 311 aa21.07■□□□□ 0.96
LIME1-204ENST00000476183 CYP4F3Q08477 520 aa21.07■□□□□ 0.96
LIME1-204ENST00000476183 KIF5AQ12840 1032 aa21.07■□□□□ 0.96
LIME1-204ENST00000476183 DOK6Q6PKX4 331 aa21.07■□□□□ 0.96
LIME1-204ENST00000476183 TAF8Q7Z7C8 310 aa21.07■□□□□ 0.96
LIME1-204ENST00000476183 TRIM74Q86UV6 250 aa21.07■□□□□ 0.96
LIME1-204ENST00000476183 PROSER1Q86XN7 944 aa21.07■□□□□ 0.96
LIME1-204ENST00000476183 RAVER1Q8IY67 606 aaKnown RBP21.07■□□□□ 0.96
LIME1-204ENST00000476183 HTR3CQ8WXA8 447 aa21.07■□□□□ 0.96
LIME1-204ENST00000476183 KLHL8Q9P2G9 620 aaPredicted RBP21.07■□□□□ 0.96
LIME1-204ENST00000476183 PACSIN2Q9UNF0 486 aaPredicted RBP21.07■□□□□ 0.96
LIME1-204ENST00000476183 EFR3BQ9Y2G0 817 aa21.07■□□□□ 0.96
LIME1-204ENST00000476183 TMEM98Q9Y2Y6 226 aa21.07■□□□□ 0.96
LIME1-204ENST00000476183 ZFHX4Q86UP3 3567 aa21.07■□□□□ 0.96
LIME1-204ENST00000476183 F5H423 210 aaPredicted RBP21.06■□□□□ 0.96
LIME1-204ENST00000476183 MTSS1O43312 755 aa21.06■□□□□ 0.96
LIME1-204ENST00000476183 RBL1P28749 1068 aa21.06■□□□□ 0.96
LIME1-204ENST00000476183 GNPDA1P46926 289 aa21.06■□□□□ 0.96
LIME1-204ENST00000476183 OTUD4Q01804 1114 aaKnown RBP21.06■□□□□ 0.96
LIME1-204ENST00000476183 XRCC4Q13426 336 aa21.06■□□□□ 0.96
LIME1-204ENST00000476183 KDELC1Q6UW63 502 aa21.06■□□□□ 0.96
LIME1-204ENST00000476183 NRROSQ86YC3 692 aa21.06■□□□□ 0.96
LIME1-204ENST00000476183 ACTL9Q8TC94 416 aa21.06■□□□□ 0.96
LIME1-204ENST00000476183 COX14Q96I36 57 aa21.06■□□□□ 0.96
LIME1-204ENST00000476183 ABCG4Q9H172 646 aa21.06■□□□□ 0.96
LIME1-204ENST00000476183 AMFRQ9UKV5 643 aa21.06■□□□□ 0.96
LIME1-204ENST00000476183 CNOT6Q9ULM6 557 aaKnown RBP21.06■□□□□ 0.96
LIME1-204ENST00000476183 SHOC2Q9UQ13 582 aa21.06■□□□□ 0.96
LIME1-204ENST00000476183 PCDHB1Q9Y5F3 818 aa21.06■□□□□ 0.96
LIME1-204ENST00000476183 ST14Q9Y5Y6 855 aa21.06■□□□□ 0.96
LIME1-204ENST00000476183 CHD6Q8TD26 2715 aa21.05■□□□□ 0.96
LIME1-204ENST00000476183 H7C0C1 242 aa21.05■□□□□ 0.96
LIME1-204ENST00000476183 INPP4BO15327 924 aa21.05■□□□□ 0.96
LIME1-204ENST00000476183 NDST3O95803 873 aa21.05■□□□□ 0.96
LIME1-204ENST00000476183 FTCDO95954 541 aa21.05■□□□□ 0.96
LIME1-204ENST00000476183 IVLP07476 585 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms