RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 BPIFB6Q8NFQ5 453 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 ACTL9Q8TC94 416 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 TRUB1Q8WWH5 349 aaKnown RBP11.51□□□□□ -0.57
U2AF1-209ENST00000475639 NKD2Q969F2 451 aaPredicted RBP11.51□□□□□ -0.57
U2AF1-209ENST00000475639 CXorf21Q9HAI6 301 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 SAE1Q9UBE0 346 aaPredicted RBP11.51□□□□□ -0.57
U2AF1-209ENST00000475639 KRT33AO76009 404 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 ATF6P18850 670 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 PSME3P61289 254 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 SGCGQ13326 291 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 BMPR2Q13873 1038 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 OXA1LQ15070 435 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 PYDC2Q56P42 97 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 PAGE2BQ5JRK9 111 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 MED8Q96G25 268 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 NT5MQ9NPB1 228 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 TOR4AQ9NXH8 423 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 GGA3Q9NZ52 723 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 BAIAP2Q9UQB8 552 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 ERVK-11Q9UQG0 969 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 MYH9P35579 1960 aaKnown RBP11.51□□□□□ -0.57
U2AF1-209ENST00000475639 TRIM64CA6NLI5 447 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 ARHGEF33A8MVX0 844 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 FAM25EA8MYX2 175 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 C19orf81C9J6K1 198 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 FARP2O94887 1054 aaPredicted RBP11.51□□□□□ -0.57
U2AF1-209ENST00000475639 ITGB3P05106 788 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 NTSP30990 170 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 N4BP2L1Q5TBK1 243 aaPredicted RBP11.51□□□□□ -0.57
U2AF1-209ENST00000475639 EFCAB12Q6NXP0 572 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 XRRA1Q6P2D8 792 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 BHLHB9Q6PI77 547 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 FAM131BQ86XD5 332 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 PEX5LQ8IYB4 626 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 CLHC1Q8NHS4 586 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 PI4K2AQ9BTU6 479 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 FBXO28Q9NVF7 368 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 VANGL2Q9ULK5 521 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 DDX60LQ5H9U9 1706 aaKnown RBP11.51□□□□□ -0.57
U2AF1-209ENST00000475639 CDK5RAP2Q96SN8 1893 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 COL24A1Q17RW2 1714 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 SLC12A8A0AV02 714 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 CXorf49A8MYA2 514 aaPredicted RBP11.5□□□□□ -0.57
U2AF1-209ENST00000475639 CBX4O00257 560 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 GSRP00390 522 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 RLN1P04808 185 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 ACADMP11310 421 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 DNAJB2P25686 324 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 SLC26A3P40879 764 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 BOP1Q14137 746 aaKnown RBP11.5□□□□□ -0.57
U2AF1-209ENST00000475639 IKBKEQ14164 716 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 GPR107Q5VW38 600 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 FAM171BQ6P995 826 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 IGFN1Q86VF2 1251 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 TRPV1Q8NER1 839 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 POP5Q969H6 163 aaKnown RBP11.5□□□□□ -0.57
U2AF1-209ENST00000475639 LENG9Q96B70 501 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 ACSF2Q96CM8 615 aaPredicted RBP11.5□□□□□ -0.57
U2AF1-209ENST00000475639 CGRRF1Q99675 332 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 RTKNQ9BST9 563 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 OSBPL11Q9BXB4 747 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 TDRD1Q9BXT4 1180 aaKnown RBP11.5□□□□□ -0.57
U2AF1-209ENST00000475639 SEMA6AQ9H2E6 1030 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 CLEC4AQ9UMR7 237 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 MINPP1Q9UNW1 487 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 AP4E1Q9UPM8 1137 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 GMPPBQ9Y5P6 360 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 A0A096LPK6 155 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 KHDRBS3O75525 346 aaKnown RBP11.5□□□□□ -0.57
U2AF1-209ENST00000475639 NTRK1P04629 796 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 OR56A5P0C7T3 313 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 RPL4P36578 427 aaKnown RBP11.5□□□□□ -0.57
U2AF1-209ENST00000475639 BCAT1P54687 386 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 GALNT3Q14435 633 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 HKDC1Q2TB90 917 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 TIGD2Q4W5G0 525 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 ANGEL2Q5VTE6 544 aaKnown RBP11.5□□□□□ -0.57
U2AF1-209ENST00000475639 P2RX7Q99572 595 aaKnown RBP11.5□□□□□ -0.57
U2AF1-209ENST00000475639 PNPOQ9NVS9 261 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 MAP10Q9P2G4 905 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 RPS6KA6Q9UK32 745 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 ZNRF3Q9ULT6 936 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 SSR3Q9UNL2 185 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 GRIP1Q9Y3R0 1128 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 PSME4Q14997 1843 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 TRIM64BA6NI03 449 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 TNFRSF10AO00220 468 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 TSPAN3O60637 253 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 ZC3H11AO75152 810 aaKnown RBP eCLIP11.5□□□□□ -0.57
U2AF1-209ENST00000475639 ZNF182P17025 639 aaPredicted RBP11.5□□□□□ -0.57
U2AF1-209ENST00000475639 SLC1A6P48664 564 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 IRF8Q02556 426 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 HSF2Q03933 536 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 ZNF543Q08ER8 600 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 E2F2Q14209 437 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 PTGES3Q15185 160 aaKnown RBP11.5□□□□□ -0.57
U2AF1-209ENST00000475639 PIGGQ5H8A4 983 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 C16orf46Q6P387 395 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 ARCQ7LC44 396 aa11.5□□□□□ -0.57
U2AF1-209ENST00000475639 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms