RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 MRPS9P82933 396 aaKnown RBP4.1□□□□□ -1.75
USP16-205ENST00000474835 RBP5P82980 135 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 EMX2Q04743 252 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 CLCQ05315 142 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 MMRN1Q13201 1228 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 FLOT2Q14254 428 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 SQLEQ14534 574 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 CYTH1Q15438 398 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 BRDTQ58F21 947 aaPredicted RBP4.1□□□□□ -1.75
USP16-205ENST00000474835 FAAH2Q6GMR7 532 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 APOBEC3HQ6NTF7 200 aaKnown RBP4.1□□□□□ -1.75
USP16-205ENST00000474835 CNSTQ6PJW8 725 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 CYP20A1Q6UW02 462 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 KIAA1324Q6UXG2 1013 aaKnown RBP4.1□□□□□ -1.75
USP16-205ENST00000474835 ZNF782Q6ZMW2 699 aaPredicted RBP4.1□□□□□ -1.75
USP16-205ENST00000474835 BRINP3Q76B58 766 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 TMEM179BQ7Z7N9 219 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 C9orf62Q8N4C0 152 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 CERS5Q8N5B7 392 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 TDRD5Q8NAT2 981 aaKnown RBP4.1□□□□□ -1.75
USP16-205ENST00000474835 REPS2Q8NFH8 660 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 CANT1Q8WVQ1 401 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 PRPF31Q8WWY3 499 aaKnown RBP4.1□□□□□ -1.75
USP16-205ENST00000474835 ZNF606Q8WXB4 792 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 CPNE1Q99829 537 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 TMEM79Q9BSE2 394 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 C17orf80Q9BSJ5 609 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 MAGIXQ9H6Y5 334 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 CHST12Q9NRB3 414 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 PAK5Q9P286 719 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 EPHA6Q9UF33 1036 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 DIMT1Q9UNQ2 313 aaKnown RBP4.1□□□□□ -1.75
USP16-205ENST00000474835 ASB1Q9Y576 335 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 PCDHB3Q9Y5E6 796 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 ATG2AQ2TAZ0 1938 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 MUC22E2RYF6 1773 aaPredicted RBP4.1□□□□□ -1.75
USP16-205ENST00000474835 hCG_2014768A0A024R1R8 64 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 SERTM1A2A2V5 107 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 TUBAL3A6NHL2 446 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 POC1B-GALNT4F8VUJ3 575 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 SLC1A7O00341 560 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 AMHP03971 560 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 CHRNGP07510 517 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 TFEBP19484 476 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 SCNN1GP51170 649 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 BCAT1P54687 386 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 C21orf58P58505 322 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 ZNF45Q02386 682 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 OCA2Q04671 838 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 DCAF17Q5H9S7 520 aaPredicted RBP4.1□□□□□ -1.75
USP16-205ENST00000474835 TECRLQ5HYJ1 363 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 NCBP2-AS2Q69YL0 99 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 BLOC1S3Q6QNY0 202 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 ZCCHC23Q6ZST2 131 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 CREB3L2Q70SY1 520 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 BHLHA9Q7RTU4 235 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 ZNF438Q7Z4V0 828 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 PSTKQ8IV42 348 aaKnown RBP4.1□□□□□ -1.75
USP16-205ENST00000474835 NUDCD3Q8IVD9 361 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 MSRB3Q8IXL7 192 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 LINC00518Q8N0U6 118 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 ZNF366Q8N895 744 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 ASCC1Q8N9N2 400 aaKnown RBP4.1□□□□□ -1.75
USP16-205ENST00000474835 GPR152Q8TDT2 470 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 CPA5Q8WXQ8 436 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 HGDQ93099 445 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 LCORQ96JN0 433 aaPredicted RBP4.1□□□□□ -1.75
USP16-205ENST00000474835 HEXIM2Q96MH2 286 aaKnown RBP4.1□□□□□ -1.75
USP16-205ENST00000474835 HOPXQ9BPY8 73 aaPredicted RBP4.1□□□□□ -1.75
USP16-205ENST00000474835 MXRA8Q9BRK3 442 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 TARS2Q9BW92 718 aaKnown RBP4.1□□□□□ -1.75
USP16-205ENST00000474835 GTPBP2Q9BX10 602 aaKnown RBP4.1□□□□□ -1.75
USP16-205ENST00000474835 TRIM54Q9BYV2 358 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 MMP27Q9H306 513 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 C3orf14Q9HBI5 128 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 SMPD4Q9NXE4 827 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 BAG5Q9UL15 447 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 MKLN1Q9UL63 735 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 DAGLAQ9Y4D2 1042 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 KCNMB2Q9Y691 235 aa4.1□□□□□ -1.75
USP16-205ENST00000474835 SAGE2PA6NJ88 616 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 A6NL46 340 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 GOLGA8CPA6NN73 597 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 WASH4PA8MWX3 477 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 ZBTB42B2RXF5 422 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 USP17L15C9J2P7 530 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 USP17L13C9JLJ4 530 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 USP17L11C9JVI0 530 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 USP17L18D6R9N7 530 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 USP17L22D6RA61 530 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 USP17L17D6RBQ6 530 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 USP17L19D6RCP7 530 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 USP17L20D6RJB6 530 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 HYAL3O43820 417 aaPredicted RBP4.09□□□□□ -1.75
USP16-205ENST00000474835 GCNT3O95395 438 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 SNAP29O95721 258 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 FCGR1AP12314 374 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 PCSK2P16519 638 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 PGAM1P18669 254 aa4.09□□□□□ -1.75
USP16-205ENST00000474835 CAPN3P20807 821 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms