RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 BMFQ96LC9 184 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 KRT12Q99456 494 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 TRIM51Q9BSJ1 452 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 SLC17A9Q9BYT1 436 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 FZD3Q9NPG1 666 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 MBNL1Q9NR56 388 aaKnown RBP6.99□□□□□ -1.29
LIMD1-204ENST00000474665 RAB6BQ9NRW1 208 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 PAK5Q9P286 719 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 SHOC2Q9UQ13 582 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 KCTD3Q9Y597 815 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 MYO9AB2RTY4 2548 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 LRP4O75096 1905 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 ATXN2Q99700 1313 aaKnown RBP6.99□□□□□ -1.29
LIMD1-204ENST00000474665 GOLGA6L10A0A0M3HER8 536 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 A0A1W2PQ67 120 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 A0A1W2PR77 199 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 POM121BA6NF01 834 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 BHMG1C9JSJ3 638 aaPredicted RBP6.98□□□□□ -1.29
LIMD1-204ENST00000474665 CCDC188H7C350 402 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 NEMP1O14524 444 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 GAPDHSO14556 408 aaPredicted RBP6.98□□□□□ -1.29
LIMD1-204ENST00000474665 RAD51CO43502 376 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 LDB2O43679 373 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 ZNF189O75820 626 aaPredicted RBP6.98□□□□□ -1.29
LIMD1-204ENST00000474665 RECQL5O94762 991 aaPredicted RBP6.98□□□□□ -1.29
LIMD1-204ENST00000474665 ECEL1O95672 775 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 PAK4O96013 591 aaPredicted RBP6.98□□□□□ -1.29
LIMD1-204ENST00000474665 SOD1P00441 154 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 FGF1P05230 155 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 APRTP07741 180 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 TPH1P17752 444 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 HLA-DPA1P20036 260 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 XPAP23025 273 aaPredicted RBP6.98□□□□□ -1.29
LIMD1-204ENST00000474665 CA5AP35218 305 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 IGFALSP35858 605 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 FDFT1P37268 417 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 ETV3P41162 512 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 PAFAH1B1P43034 410 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 GRIA4P48058 902 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 CLDN2P57739 230 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 CCDC15Q0P6D6 951 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 ELP6Q0PNE2 266 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 GPS1Q13098 491 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 MTM1Q13496 603 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 PTK6Q13882 451 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 WHAMMP3Q1A5X7 153 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 CFAP58Q5T655 872 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 RNASEH2BQ5TBB1 312 aaKnown RBP6.98□□□□□ -1.29
LIMD1-204ENST00000474665 LYSMD4Q5XG99 296 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 KCTD16Q68DU8 428 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 KIAA1161Q6NSJ0 714 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 GCNT7Q6ZNI0 430 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 GSTA5Q7RTV2 222 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 TMC3Q7Z5M5 1100 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 C11orf74Q86VG3 221 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 CAND1Q86VP6 1230 aaKnown RBP6.98□□□□□ -1.29
LIMD1-204ENST00000474665 JAMLQ86YT9 394 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 SYT12Q8IV01 421 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 ZCCHC9Q8N567 271 aaKnown RBP6.98□□□□□ -1.29
LIMD1-204ENST00000474665 TP53I13Q8NBR0 393 aaPredicted RBP6.98□□□□□ -1.29
LIMD1-204ENST00000474665 NOA1Q8NC60 698 aaKnown RBP6.98□□□□□ -1.29
LIMD1-204ENST00000474665 PLA2G15Q8NCC3 412 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 OR52K1Q8NGK4 314 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 KIF18AQ8NI77 898 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 ASB12Q8WXK4 309 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 ADAMTS14Q8WXS8 1223 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 PIGKQ92643 395 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 FOXJ1Q92949 421 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 SCAMP4Q969E2 229 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 SLC6A18Q96N87 628 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 CAMK1GQ96NX5 476 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 LENG8Q96PV6 779 aaPredicted RBP6.98□□□□□ -1.29
LIMD1-204ENST00000474665 AGAP2Q99490 1192 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 MYOCQ99972 504 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 TBL1YQ9BQ87 522 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 FERMT1Q9BQL6 677 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 ADGRE3Q9BY15 652 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 LRRC40Q9H9A6 602 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 L2HGDHQ9H9P8 463 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 CAPN10Q9HC96 672 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 MAGEE1Q9HCI5 957 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 TM9SF3Q9HD45 589 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 CASS4Q9NQ75 786 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 FSCN3Q9NQT6 498 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 EIF2B3Q9NR50 452 aaKnown RBP6.98□□□□□ -1.29
LIMD1-204ENST00000474665 GPR27Q9NS67 375 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 PNMA8BQ9ULN7 279 aaPredicted RBP6.98□□□□□ -1.29
LIMD1-204ENST00000474665 AAR2Q9Y312 384 aaKnown RBP6.98□□□□□ -1.29
LIMD1-204ENST00000474665 ZNF711Q9Y462 761 aa6.98□□□□□ -1.29
LIMD1-204ENST00000474665 C1orf232A0A0U1RR37 186 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 ERI2A8K979 691 aaKnown RBP6.97□□□□□ -1.29
LIMD1-204ENST00000474665 MEI4A8MW99 385 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 BUD23O43709 281 aaKnown RBP6.97□□□□□ -1.29
LIMD1-204ENST00000474665 AVILO75366 819 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 TM7SF2O76062 418 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 GAS8O95995 478 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 ELFN1P0C7U0 828 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 FTH1P19P0C7X4 201 aa6.97□□□□□ -1.29
LIMD1-204ENST00000474665 CYP2A6P11509 494 aaPredicted RBP6.97□□□□□ -1.29
LIMD1-204ENST00000474665 BPIP17213 487 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms