RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 RPS8P62241 208 aaKnown RBP6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 SPIBQ01892 262 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 GALNT2Q10471 571 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 POU4F2Q12837 409 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 PMS2P3Q13401 168 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 MTHFSDQ2M296 383 aaKnown RBP6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 C4orf17Q53FE4 359 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 PLAC9Q5JTB6 97 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 CLEC6AQ6EIG7 209 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 BBS12Q6ZW61 710 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 EXOC3L1Q86VI1 746 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 ELMOD2Q8IZ81 293 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 ALDH16A1Q8IZ83 802 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 OR5T1Q8NG75 326 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 OR8J2Q8NGG1 315 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 FAM71BQ8TC56 605 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 RHBDD1Q8TEB9 315 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 THAP4Q8WY91 577 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 LPPQ93052 612 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 TPPP3Q9BW30 176 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 RAB33BQ9H082 229 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 ANTXR1Q9H6X2 564 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 RMND5AQ9H871 391 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 EVA1AQ9H8M9 152 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 NGBQ9NPG2 151 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 HCFC1R1Q9NWW0 138 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 HYPKQ9NX55 129 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 ABI2Q9NYB9 513 aaPredicted RBP6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 TSPAN16Q9UKR8 245 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 INTS6Q9UL03 887 aaKnown RBP6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 ENTPD4Q9Y227 616 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 PCDHB14Q9Y5E9 798 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 SRPRBQ9Y5M8 271 aaKnown RBP6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 MTCH2Q9Y6C9 303 aa6.1□□□□□ -1.43
SMARCE1-208ENST00000474246 CACNA1HO95180 2353 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 ZFYVE26Q68DK2 2539 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 KMT2EQ8IZD2 1858 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 GSTTP1A0A1W2PQM5 241 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 HMX3A6NHT5 357 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 OR6C70A6NIJ9 312 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 XYLBO75191 536 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 VNN2O95498 520 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 C22orf31O95567 290 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 CRYZL1O95825 349 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 IGHEP01854 428 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 PDE6AP16499 860 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 C5AR1P21730 350 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 CALB2P22676 271 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 CST5P28325 142 aaPredicted RBP6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 PTPN6P29350 595 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 IFNA8P32881 189 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 MCAMP43121 646 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 LMAN1P49257 510 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 SLC11A2P49281 568 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 CASP4P49662 377 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 EPHB4P54760 987 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 ATP5IP56385 69 aaPredicted RBP6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 NLRP11P59045 1033 aaKnown RBP6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 SRP54P61011 504 aaKnown RBP6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 GLO1Q04760 184 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 TBL3Q12788 808 aaKnown RBP6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 ART3Q13508 389 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 SCARF1Q14162 830 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 RRP1BQ14684 758 aaKnown RBP6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 KARSQ15046 597 aaKnown RBP6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 ZYXQ15942 572 aaKnown RBP6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 MAPK6Q16659 721 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 PAGE2BQ5JRK9 111 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 GNASQ5JWF2 1037 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 PLEKHS1Q5SXH7 462 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 H1FNTQ75WM6 255 aaPredicted RBP6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 NATD1Q8N6N6 113 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 SNX31Q8N9S9 440 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 PSMA8Q8TAA3 256 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 LKAAEAR1Q8TD35 194 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 CD300LFQ8TDQ1 290 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 ACTRT2Q8TDY3 377 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 SLC20A1Q8WUM9 679 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 SLC25A36Q96CQ1 311 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 FAM227BQ96M60 508 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 NSMCE3Q96MG7 304 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 ZFP42Q96MM3 310 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 TWNKQ96RR1 684 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 CGRRF1Q99675 332 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 ADGRE3Q9BY15 652 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 FRMD8Q9BZ67 464 aaPredicted RBP6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 KLHL25Q9H0H3 589 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 BLZF1Q9H2G9 400 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 MUC13Q9H3R2 512 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 OSGEPL1Q9H4B0 414 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 IGFLR1Q9H665 355 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 MRPL47Q9HD33 250 aaKnown RBP6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 NT5MQ9NPB1 228 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 DMAP1Q9NPF5 467 aaPredicted RBP6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 TAS2R10Q9NYW0 307 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 MTMR6Q9Y217 621 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 TBC1D30Q9Y2I9 924 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 NFE2L3Q9Y4A8 694 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 PCDHA10Q9Y5I2 948 aa6.09□□□□□ -1.43
SMARCE1-208ENST00000474246 GPC6Q9Y625 555 aaPredicted RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms