RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 HIST2H2BCQ6DN03 193 aa20.22■□□□□ 0.83
APP-215ENST00000474136 ERAP2Q6P179 960 aa20.22■□□□□ 0.83
APP-215ENST00000474136 DNAAF5Q86Y56 855 aa20.22■□□□□ 0.83
APP-215ENST00000474136 PELI3Q8N2H9 469 aa20.22■□□□□ 0.83
APP-215ENST00000474136 FNIP1Q8TF40 1166 aa20.22■□□□□ 0.83
APP-215ENST00000474136 RXFP2Q8WXD0 754 aa20.22■□□□□ 0.83
APP-215ENST00000474136 CASKIN2Q8WXE0 1202 aa20.22■□□□□ 0.83
APP-215ENST00000474136 ART4Q93070 314 aa20.22■□□□□ 0.83
APP-215ENST00000474136 SUDS3Q9H7L9 328 aaPredicted RBP20.22■□□□□ 0.83
APP-215ENST00000474136 ANAPC2Q9UJX6 822 aa20.22■□□□□ 0.83
APP-215ENST00000474136 PLAAQ9Y263 795 aa20.22■□□□□ 0.83
APP-215ENST00000474136 PCDHGA3Q9Y5H0 932 aa20.22■□□□□ 0.83
APP-215ENST00000474136 BLACEA4D250 179 aa20.21■□□□□ 0.83
APP-215ENST00000474136 HGSO14964 777 aaPredicted RBP20.21■□□□□ 0.83
APP-215ENST00000474136 NKX2-8O15522 239 aa20.21■□□□□ 0.83
APP-215ENST00000474136 BUB1BO60566 1050 aaPredicted RBP20.21■□□□□ 0.83
APP-215ENST00000474136 RECQL5O94762 991 aaPredicted RBP20.21■□□□□ 0.83
APP-215ENST00000474136 CD1CP29017 333 aa20.21■□□□□ 0.83
APP-215ENST00000474136 C4orf17Q53FE4 359 aa20.21■□□□□ 0.83
APP-215ENST00000474136 PPP1R15BQ5SWA1 713 aa20.21■□□□□ 0.83
APP-215ENST00000474136 CACNA2D3Q8IZS8 1091 aa20.21■□□□□ 0.83
APP-215ENST00000474136 PYROXD2Q8N2H3 581 aa20.21■□□□□ 0.83
APP-215ENST00000474136 FAM26EQ8N5C1 309 aa20.21■□□□□ 0.83
APP-215ENST00000474136 HCAR2Q8TDS4 363 aa20.21■□□□□ 0.83
APP-215ENST00000474136 CDH19Q9H159 772 aa20.21■□□□□ 0.83
APP-215ENST00000474136 IP6K2Q9UHH9 426 aa20.21■□□□□ 0.83
APP-215ENST00000474136 TFR2Q9UP52 801 aa20.21■□□□□ 0.83
APP-215ENST00000474136 ATP8A1Q9Y2Q0 1164 aa20.21■□□□□ 0.83
APP-215ENST00000474136 TMEM191CA6NGB0 347 aa20.2■□□□□ 0.82
APP-215ENST00000474136 RHPN2P1A8MT19 583 aa20.2■□□□□ 0.82
APP-215ENST00000474136 ATMINO43313 823 aaPredicted RBP20.2■□□□□ 0.82
APP-215ENST00000474136 DUX1O43812 170 aa20.2■□□□□ 0.82
APP-215ENST00000474136 MPSTP25325 297 aa20.2■□□□□ 0.82
APP-215ENST00000474136 RALGDSQ12967 914 aa20.2■□□□□ 0.82
APP-215ENST00000474136 PIGHQ14442 188 aaPredicted RBP20.2■□□□□ 0.82
APP-215ENST00000474136 NKAIN2Q5VXU1 208 aa20.2■□□□□ 0.82
APP-215ENST00000474136 ZNF438Q7Z4V0 828 aa20.2■□□□□ 0.82
APP-215ENST00000474136 C17orf82Q86X59 251 aaPredicted RBP20.2■□□□□ 0.82
APP-215ENST00000474136 NRROSQ86YC3 692 aa20.2■□□□□ 0.82
APP-215ENST00000474136 CAMK1DQ8IU85 385 aa20.2■□□□□ 0.82
APP-215ENST00000474136 JOSD2Q8TAC2 188 aa20.2■□□□□ 0.82
APP-215ENST00000474136 C9orf43Q8TAL5 461 aaPredicted RBP20.2■□□□□ 0.82
APP-215ENST00000474136 GPBAR1Q8TDU6 330 aa20.2■□□□□ 0.82
APP-215ENST00000474136 PATE1Q8WXA2 126 aa20.2■□□□□ 0.82
APP-215ENST00000474136 TRIM10Q9UDY6 481 aa20.2■□□□□ 0.82
APP-215ENST00000474136 ANAPC7Q9UJX3 599 aa20.2■□□□□ 0.82
APP-215ENST00000474136 USP9XQ93008 2570 aaPredicted RBP20.2■□□□□ 0.82
APP-215ENST00000474136 ARHGEF17Q96PE2 2063 aaPredicted RBP20.19■□□□□ 0.82
APP-215ENST00000474136 ANKRD36A6QL64 1941 aa20.19■□□□□ 0.82
APP-215ENST00000474136 A0A0U1RQJ8 604 aa20.19■□□□□ 0.82
APP-215ENST00000474136 PRSS38A1L453 326 aa20.19■□□□□ 0.82
APP-215ENST00000474136 ZNF891A8MT65 544 aaPredicted RBP20.19■□□□□ 0.82
APP-215ENST00000474136 RASA4BC9J798 803 aa20.19■□□□□ 0.82
APP-215ENST00000474136 TNFRSF10CO14798 259 aa20.19■□□□□ 0.82
APP-215ENST00000474136 RASA4O43374 803 aa20.19■□□□□ 0.82
APP-215ENST00000474136 RAD1O60671 282 aa20.19■□□□□ 0.82
APP-215ENST00000474136 FGF1P05230 155 aa20.19■□□□□ 0.82
APP-215ENST00000474136 PRKAR1AP10644 381 aa20.19■□□□□ 0.82
APP-215ENST00000474136 SDC4P31431 198 aa20.19■□□□□ 0.82
APP-215ENST00000474136 SLC1A1P43005 524 aa20.19■□□□□ 0.82
APP-215ENST00000474136 HDAC4P56524 1084 aa20.19■□□□□ 0.82
APP-215ENST00000474136 C11orf63Q6NUN7 778 aa20.19■□□□□ 0.82
APP-215ENST00000474136 C17orf53Q8N3J3 647 aaPredicted RBP20.19■□□□□ 0.82
APP-215ENST00000474136 RTL3Q8N8U3 475 aaKnown RBP20.19■□□□□ 0.82
APP-215ENST00000474136 ZDHHC1Q8WTX9 485 aa20.19■□□□□ 0.82
APP-215ENST00000474136 MCEEQ96PE7 176 aa20.19■□□□□ 0.82
APP-215ENST00000474136 TMEM9Q9P0T7 183 aa20.19■□□□□ 0.82
APP-215ENST00000474136 UTP20O75691 2785 aaKnown RBP20.18■□□□□ 0.82
APP-215ENST00000474136 ECEL1O95672 775 aa20.18■□□□□ 0.82
APP-215ENST00000474136 CCNB1P14635 433 aa20.18■□□□□ 0.82
APP-215ENST00000474136 GM2AP17900 193 aa20.18■□□□□ 0.82
APP-215ENST00000474136 KELP23276 732 aa20.18■□□□□ 0.82
APP-215ENST00000474136 TRIM23P36406 574 aa20.18■□□□□ 0.82
APP-215ENST00000474136 LIMK2P53671 638 aa20.18■□□□□ 0.82
APP-215ENST00000474136 GNG11P61952 73 aa20.18■□□□□ 0.82
APP-215ENST00000474136 ETF1P62495 437 aaKnown RBP20.18■□□□□ 0.82
APP-215ENST00000474136 SERINC3Q13530 473 aa20.18■□□□□ 0.82
APP-215ENST00000474136 NR1D2Q14995 579 aa20.18■□□□□ 0.82
APP-215ENST00000474136 ZNF569Q5MCW4 686 aa20.18■□□□□ 0.82
APP-215ENST00000474136 CFAP58Q5T655 872 aa20.18■□□□□ 0.82
APP-215ENST00000474136 BRAT1Q6PJG6 821 aa20.18■□□□□ 0.82
APP-215ENST00000474136 LIPIQ6XZB0 460 aa20.18■□□□□ 0.82
APP-215ENST00000474136 DAAM2Q86T65 1068 aa20.18■□□□□ 0.82
APP-215ENST00000474136 CARS2Q9HA77 564 aaKnown RBP20.18■□□□□ 0.82
APP-215ENST00000474136 OCIAD1Q9NX40 245 aa20.18■□□□□ 0.82
APP-215ENST00000474136 SLC39A1Q9NY26 324 aa20.18■□□□□ 0.82
APP-215ENST00000474136 SPENQ96T58 3664 aaKnown RBP20.17■□□□□ 0.82
APP-215ENST00000474136 C2CD4BA6NLJ0 364 aa20.17■□□□□ 0.82
APP-215ENST00000474136 FUCA1P04066 466 aa20.17■□□□□ 0.82
APP-215ENST00000474136 HOXC4P09017 264 aaPredicted RBP20.17■□□□□ 0.82
APP-215ENST00000474136 AK4P27144 223 aaPredicted RBP20.17■□□□□ 0.82
APP-215ENST00000474136 EPHB2P29323 1055 aa20.17■□□□□ 0.82
APP-215ENST00000474136 CSF2RBP32927 897 aa20.17■□□□□ 0.82
APP-215ENST00000474136 MAN1A1P33908 653 aa20.17■□□□□ 0.82
APP-215ENST00000474136 RFC1P35251 1148 aaPredicted RBP20.17■□□□□ 0.82
APP-215ENST00000474136 RGRP47804 291 aa20.17■□□□□ 0.82
APP-215ENST00000474136 STRADAQ7RTN6 431 aa20.17■□□□□ 0.82
APP-215ENST00000474136 NIPA2Q8N8Q9 360 aa20.17■□□□□ 0.82
APP-215ENST00000474136 AGBL5Q8NDL9 886 aa20.17■□□□□ 0.82
APP-215ENST00000474136 SLC45A3Q96JT2 553 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms