RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 USP33Q8TEY7 942 aa5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 C2orf15Q8WU43 125 aaKnown RBP5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 ARNTL2Q8WYA1 636 aa5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 JADE3Q92613 823 aa5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 FATE1Q969F0 183 aa5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 FBXO32Q969P5 355 aa5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 PTCD3Q96EY7 689 aaKnown RBP5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 FAR2Q96K12 515 aa5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 SERPINI1Q99574 410 aa5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 IL12RB2Q99665 862 aa5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 MRPL9Q9BYD2 267 aaKnown RBP5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 ZYG11BQ9C0D3 744 aa5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 NACA2Q9H009 215 aa5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 ILKAPQ9H0C8 392 aaPredicted RBP5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 ZCWPW1Q9H0M4 648 aa5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 C1orf21Q9H246 121 aa5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 C12orf65Q9H3J6 166 aaKnown RBP5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 RETREG1Q9H6L5 497 aa5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 TASP1Q9H6P5 420 aa5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 YY1AP1Q9H869 796 aa5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 AGO3Q9H9G7 860 aaKnown RBP5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 EBF2Q9HAK2 575 aa5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 NMRAL1Q9HBL8 299 aa5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 EML4Q9HC35 981 aaKnown RBP5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 GP6Q9HCN6 339 aa5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 TRPC7Q9HCX4 862 aa5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 GCM1Q9NP62 436 aa5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 FBXO6Q9NRD1 293 aaPredicted RBP5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 RGS18Q9NS28 235 aa5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 AP5S1Q9NUS5 200 aa5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 ARL8BQ9NVJ2 186 aa5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 RBM22Q9NW64 420 aaKnown RBP eCLIP5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 MIOSQ9NXC5 875 aa5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 MARCOQ9UEW3 520 aaPredicted RBP5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 MCM8Q9UJA3 840 aa5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 SLC39A10Q9ULF5 831 aa5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 MAGED2Q9UNF1 606 aaPredicted RBP5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 SCML2Q9UQR0 700 aa5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 ACOT9Q9Y305 439 aa5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 PCDHB7Q9Y5E2 793 aa5.92□□□□□ -1.46
ATPAF1-204ENST00000474020 ZCWPW2A0A1B0GU75 182 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 A0A1W2PQH9 124 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 KCNU1A8MYU2 1149 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 F8W8V4 182 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 NUAK1O60285 661 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 USP12O75317 370 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 PMPCBO75439 489 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 OAZ2O95190 189 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 STAMBPO95630 424 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 IGLV3-25P01717 112 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 RBP1P09455 135 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 T-ENOLP0DO92 83 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 FGF3P11487 239 aaPredicted RBP5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 TPH1P17752 444 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 AOC1P19801 751 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 CD247P20963 164 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 SAT1P21673 171 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 ELF1P32519 619 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 VHLP40337 213 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 MAGEA12P43365 314 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 MAPKAPK2P49137 400 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 HARS2P49590 506 aaKnown RBP5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 SERPINH1P50454 418 aaKnown RBP5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 CLCN5P51795 746 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 CCNG1P51959 295 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 ACLYP53396 1101 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 YBEYP58557 167 aaPredicted RBP5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 ERVFRD-1P60508 538 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 RAB10P61026 200 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 PRAMEP78395 509 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 SP3Q02447 781 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 KDSRQ06136 332 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 ZBTB17Q13105 803 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 PRKAA1Q13131 559 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 NOGQ13253 232 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 ITGA9Q13797 1035 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 HNRNPDQ14103 355 aaKnown RBP5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 ZNF235Q14590 738 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 NAA25Q14CX7 972 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 PCLAFQ15004 111 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 MAPRE2Q15555 327 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 TAF12Q16514 161 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 FAM83EQ2M2I3 478 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 PARP15Q460N3 678 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 C10orf120Q5SQS8 335 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 CERCAMQ5T4B2 595 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 MARC1Q5VT66 337 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 AGAP9Q5VTM2 703 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 C1orf146Q5VVC0 180 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 LIPMQ5VYY2 423 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 SEL1L3Q68CR1 1132 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 CWF19L1Q69YN2 538 aaKnown RBP5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 KIAA0930Q6ICG6 404 aaPredicted RBP5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 CES3Q6UWW8 571 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 C16orf89Q6UX73 402 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 ZYG11AQ6WRX3 759 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 C10orf107Q8IVU9 208 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 APLFQ8IW19 511 aaPredicted RBP5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 SCUBE1Q8IWY4 988 aa5.91□□□□□ -1.46
ATPAF1-204ENST00000474020 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms