RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 CHFRQ96EP1 664 aa12.8□□□□□ -0.36
VPS13D-205ENST00000473099 MAGEB18Q96M61 343 aa12.8□□□□□ -0.36
VPS13D-205ENST00000473099 PLEKHG4BQ96PX9 1271 aa12.8□□□□□ -0.36
VPS13D-205ENST00000473099 KLF6Q99612 283 aaPredicted RBP12.8□□□□□ -0.36
VPS13D-205ENST00000473099 CCDC68Q9H2F9 335 aa12.8□□□□□ -0.36
VPS13D-205ENST00000473099 SUDS3Q9H7L9 328 aaPredicted RBP12.8□□□□□ -0.36
VPS13D-205ENST00000473099 DYRK4Q9NR20 520 aa12.8□□□□□ -0.36
VPS13D-205ENST00000473099 FBXO6Q9NRD1 293 aaPredicted RBP12.8□□□□□ -0.36
VPS13D-205ENST00000473099 PKD2L2Q9NZM6 624 aa12.8□□□□□ -0.36
VPS13D-205ENST00000473099 NFKBIL1Q9UBC1 381 aaPredicted RBP12.8□□□□□ -0.36
VPS13D-205ENST00000473099 FKBPLQ9UIM3 349 aa12.8□□□□□ -0.36
VPS13D-205ENST00000473099 MID2Q9UJV3 735 aa12.8□□□□□ -0.36
VPS13D-205ENST00000473099 SLC39A10Q9ULF5 831 aa12.8□□□□□ -0.36
VPS13D-205ENST00000473099 PLLPQ9Y342 182 aa12.8□□□□□ -0.36
VPS13D-205ENST00000473099 NUMA1Q14980 2115 aa12.8□□□□□ -0.36
VPS13D-205ENST00000473099 A0A087X1B8 175 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 A0A096LPK6 155 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 OR51F1A6NGY5 319 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 NPIPB15A6NHN6 443 aaPredicted RBP12.79□□□□□ -0.36
VPS13D-205ENST00000473099 C16orf96A6NNT2 1141 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 H0Y858 1186 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 KPNA3O00505 521 aaPredicted RBP12.79□□□□□ -0.36
VPS13D-205ENST00000473099 CCL22O00626 93 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 RNASEH1O60930 286 aaKnown RBP12.79□□□□□ -0.36
VPS13D-205ENST00000473099 HAUS5O94927 633 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 CLDN7O95471 211 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 APOA4P06727 396 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 CTSLP07711 333 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 TIMP2P16035 220 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 DRD1P21728 446 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 IL12RB1P42701 662 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 CSRP3P50461 194 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 GALK1P51570 392 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 ADARP55265 1226 aaKnown RBP12.79□□□□□ -0.36
VPS13D-205ENST00000473099 DCDC1P59894 354 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 RAB10P61026 200 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 XIAPP98170 497 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 PEX6Q13608 980 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 PDE1CQ14123 709 aaPredicted RBP12.79□□□□□ -0.36
VPS13D-205ENST00000473099 MPP2Q14168 576 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 PTPRCAPQ14761 206 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 ZKSCAN8Q15776 578 aaPredicted RBP12.79□□□□□ -0.36
VPS13D-205ENST00000473099 SMAD2Q15796 467 aaKnown RBP12.79□□□□□ -0.36
VPS13D-205ENST00000473099 TSNAXIP1Q2TAA8 658 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 CCDC153Q494R4 210 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 ZRANB3Q5FWF4 1079 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 LRRC66Q68CR7 880 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 SDE2Q6IQ49 451 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 LVRNQ6Q4G3 990 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 RAPH1Q70E73 1250 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 DPPA4Q7L190 304 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 SNX20Q7Z614 316 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 TAX1BP1Q86VP1 789 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 TRIM42Q8IWZ5 723 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 ZNF513Q8N8E2 541 aaPredicted RBP12.79□□□□□ -0.36
VPS13D-205ENST00000473099 PIP4K2CQ8TBX8 421 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 MGARPQ8TDB4 240 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 CKAP2Q8WWK9 683 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 RAB7BQ96AH8 199 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 ATXN7L3BQ96GX2 97 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 ELMO2Q96JJ3 720 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 EPN3Q9H201 632 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 VPS11Q9H270 941 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 KCNK12Q9HB15 430 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 POPDC3Q9HBV1 291 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 MARCH4Q9P2E8 410 aaPredicted RBP12.79□□□□□ -0.36
VPS13D-205ENST00000473099 THEGQ9P2T0 379 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 B4GALT6Q9UBX8 382 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 PPM1HQ9ULR3 514 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 STON1Q9Y6Q2 735 aa12.79□□□□□ -0.36
VPS13D-205ENST00000473099 GLYATL1P3A0A0U1RQE8 302 aa12.78□□□□□ -0.36
VPS13D-205ENST00000473099 SRP72O76094 671 aaKnown RBP12.78□□□□□ -0.36
VPS13D-205ENST00000473099 C2P06681 752 aa12.78□□□□□ -0.36
VPS13D-205ENST00000473099 EPHX1P07099 455 aa12.78□□□□□ -0.36
VPS13D-205ENST00000473099 DHRS4L1P0CG22 281 aa12.78□□□□□ -0.36
VPS13D-205ENST00000473099 HLA-EP13747 358 aa12.78□□□□□ -0.36
VPS13D-205ENST00000473099 BPIP17213 487 aa12.78□□□□□ -0.36
VPS13D-205ENST00000473099 CD9P21926 228 aa12.78□□□□□ -0.36
VPS13D-205ENST00000473099 SP100P23497 879 aaPredicted RBP12.78□□□□□ -0.36
VPS13D-205ENST00000473099 SLC26A3P40879 764 aa12.78□□□□□ -0.36
VPS13D-205ENST00000473099 PTGER3P43115 390 aa12.78□□□□□ -0.36
VPS13D-205ENST00000473099 WDR4P57081 412 aaKnown RBP12.78□□□□□ -0.36
VPS13D-205ENST00000473099 CAMK2GQ13555 558 aaPredicted RBP12.78□□□□□ -0.36
VPS13D-205ENST00000473099 ITGA9Q13797 1035 aa12.78□□□□□ -0.36
VPS13D-205ENST00000473099 PDK4Q16654 411 aa12.78□□□□□ -0.36
VPS13D-205ENST00000473099 LEXMQ3ZCV2 418 aa12.78□□□□□ -0.36
VPS13D-205ENST00000473099 HSF5Q4G112 596 aaPredicted RBP12.78□□□□□ -0.36
VPS13D-205ENST00000473099 TJAP1Q5JTD0 557 aa12.78□□□□□ -0.36
VPS13D-205ENST00000473099 EGFLAMQ63HQ2 1017 aa12.78□□□□□ -0.36
VPS13D-205ENST00000473099 CNSTQ6PJW8 725 aa12.78□□□□□ -0.36
VPS13D-205ENST00000473099 RGS9BPQ6ZS82 235 aa12.78□□□□□ -0.36
VPS13D-205ENST00000473099 TTC7BQ86TV6 843 aa12.78□□□□□ -0.36
VPS13D-205ENST00000473099 CHPFQ8IZ52 775 aa12.78□□□□□ -0.36
VPS13D-205ENST00000473099 SLC44A3Q8N4M1 653 aa12.78□□□□□ -0.36
VPS13D-205ENST00000473099 ZNF366Q8N895 744 aa12.78□□□□□ -0.36
VPS13D-205ENST00000473099 GPATCH11Q8N954 259 aa12.78□□□□□ -0.36
VPS13D-205ENST00000473099 ULK4Q96C45 1275 aa12.78□□□□□ -0.36
VPS13D-205ENST00000473099 SMIM14Q96QK8 99 aa12.78□□□□□ -0.36
VPS13D-205ENST00000473099 FAM129BQ96TA1 746 aa12.78□□□□□ -0.36
VPS13D-205ENST00000473099 SLC13A1Q9BZW2 595 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms