RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 F5H423 210 aaPredicted RBP9.12□□□□□ -0.95
SYN3-211ENST00000472027 KCNN4O15554 427 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 EPOP01588 193 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 FUCA1P04066 466 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 PTMAP06454 111 aaKnown RBP9.12□□□□□ -0.95
SYN3-211ENST00000472027 CEACAM5P06731 702 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 CCDC175P0C221 793 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 PIRTP0C851 137 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 C1QTNF9P0C862 333 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 DUSP3P51452 185 aaPredicted RBP9.12□□□□□ -0.95
SYN3-211ENST00000472027 WNT3AP56704 352 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 E2F1Q01094 437 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 KLF1Q13351 362 aaPredicted RBP9.12□□□□□ -0.95
SYN3-211ENST00000472027 MPP3Q13368 585 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 TCEA2Q15560 299 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 ANKRD20A2Q5SQ80 823 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 C6orf132Q5T0Z8 1188 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 ANKRD20A1Q5TYW2 823 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 ANKRD20A3Q5VUR7 823 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 LVRNQ6Q4G3 990 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 ADAMTSL4Q6UY14 1074 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 LYSMD3Q7Z3D4 306 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 TMC3Q7Z5M5 1100 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 GKN2Q86XP6 184 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 MARCH9Q86YJ5 346 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 CDKL3Q8IVW4 592 aaPredicted RBP9.12□□□□□ -0.95
SYN3-211ENST00000472027 SDR16C5Q8N3Y7 309 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 TTC13Q8NBP0 860 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 UBE2Q2Q8WVN8 375 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 SCG3Q8WXD2 468 aaKnown RBP9.12□□□□□ -0.95
SYN3-211ENST00000472027 GATA6Q92908 595 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 GLMNQ92990 594 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 OXNAD1Q96HP4 312 aaPredicted RBP9.12□□□□□ -0.95
SYN3-211ENST00000472027 MRGPRX2Q96LB1 330 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 RIOK2Q9BVS4 552 aaKnown RBP9.12□□□□□ -0.95
SYN3-211ENST00000472027 BOCQ9BWV1 1114 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 TMEM121BQ9BXQ6 578 aaPredicted RBP9.12□□□□□ -0.95
SYN3-211ENST00000472027 FRMD8Q9BZ67 464 aaPredicted RBP9.12□□□□□ -0.95
SYN3-211ENST00000472027 TMEM168Q9H0V1 697 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 FAM83DQ9H4H8 585 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 USP29Q9HBJ7 922 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 CYP4F12Q9HCS2 524 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 LZTFL1Q9NQ48 299 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 EVA1BQ9NVM1 165 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 RSPH14Q9UHP6 348 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 SHOC2Q9UQ13 582 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 U3KQA8 63 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 SPTBN4Q9H254 2564 aa9.12□□□□□ -0.95
SYN3-211ENST00000472027 TCRBV7S2A1N4TA0A589 114 aa9.11□□□□□ -0.95
SYN3-211ENST00000472027 EME2A4GXA9 379 aaPredicted RBP9.11□□□□□ -0.95
SYN3-211ENST00000472027 FAM149AA5PLN7 773 aa9.11□□□□□ -0.95
SYN3-211ENST00000472027 AURKAO14965 403 aa9.11□□□□□ -0.95
SYN3-211ENST00000472027 INPP4BO15327 924 aa9.11□□□□□ -0.95
SYN3-211ENST00000472027 NRDCO43847 1150 aa9.11□□□□□ -0.95
SYN3-211ENST00000472027 PYGLP06737 847 aa9.11□□□□□ -0.95
SYN3-211ENST00000472027 JUPP14923 745 aa9.11□□□□□ -0.95
SYN3-211ENST00000472027 CHRNA4P43681 627 aa9.11□□□□□ -0.95
SYN3-211ENST00000472027 TNNT3P45378 269 aaPredicted RBP9.11□□□□□ -0.95
SYN3-211ENST00000472027 POLD2P49005 469 aa9.11□□□□□ -0.95
SYN3-211ENST00000472027 CLDN6P56747 220 aa9.11□□□□□ -0.95
SYN3-211ENST00000472027 INSM1Q01101 510 aaPredicted RBP9.11□□□□□ -0.95
SYN3-211ENST00000472027 NR0B2Q15466 257 aa9.11□□□□□ -0.95
SYN3-211ENST00000472027 SIRPB2Q5JXA9 342 aa9.11□□□□□ -0.95
SYN3-211ENST00000472027 HENMT1Q5T8I9 393 aaKnown RBP9.11□□□□□ -0.95
SYN3-211ENST00000472027 MEI1Q5TIA1 1274 aa9.11□□□□□ -0.95
SYN3-211ENST00000472027 ITPRIPL1Q6GPH6 555 aa9.11□□□□□ -0.95
SYN3-211ENST00000472027 UNQ6494/PRO21346Q6UXR6 183 aa9.11□□□□□ -0.95
SYN3-211ENST00000472027 TAF8Q7Z7C8 310 aa9.11□□□□□ -0.95
SYN3-211ENST00000472027 TMPRSS12Q86WS5 348 aa9.11□□□□□ -0.95
SYN3-211ENST00000472027 SLC25A41Q8N5S1 370 aa9.11□□□□□ -0.95
SYN3-211ENST00000472027 IPMKQ8NFU5 416 aa9.11□□□□□ -0.95
SYN3-211ENST00000472027 CCL4L1Q8NHW4 92 aa9.11□□□□□ -0.95
SYN3-211ENST00000472027 CCDC110Q8TBZ0 833 aa9.11□□□□□ -0.95
SYN3-211ENST00000472027 IFI44Q8TCB0 444 aa9.11□□□□□ -0.95
SYN3-211ENST00000472027 COX14Q96I36 57 aa9.11□□□□□ -0.95
SYN3-211ENST00000472027 HIC2Q96JB3 615 aa9.11□□□□□ -0.95
SYN3-211ENST00000472027 SRPK1Q96SB4 655 aaKnown RBP9.11□□□□□ -0.95
SYN3-211ENST00000472027 GPR63Q9BZJ6 419 aa9.11□□□□□ -0.95
SYN3-211ENST00000472027 GBA3Q9H227 469 aa9.11□□□□□ -0.95
SYN3-211ENST00000472027 CARS2Q9HA77 564 aaKnown RBP9.11□□□□□ -0.95
SYN3-211ENST00000472027 NCKIPSDQ9NZQ3 722 aa9.11□□□□□ -0.95
SYN3-211ENST00000472027 GULP1Q9UBP9 304 aa9.11□□□□□ -0.95
SYN3-211ENST00000472027 CNOT6Q9ULM6 557 aaKnown RBP9.11□□□□□ -0.95
SYN3-211ENST00000472027 SUFUQ9UMX1 484 aa9.11□□□□□ -0.95
SYN3-211ENST00000472027 SLC17A4Q9Y2C5 497 aa9.11□□□□□ -0.95
SYN3-211ENST00000472027 TMEM98Q9Y2Y6 226 aa9.11□□□□□ -0.95
SYN3-211ENST00000472027 ZNF711Q9Y462 761 aa9.11□□□□□ -0.95
SYN3-211ENST00000472027 SPO11Q9Y5K1 396 aa9.11□□□□□ -0.95
SYN3-211ENST00000472027 CPED1A4D0V7 1026 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 C5orf60A6NFR6 353 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 FADS2P1A8MWK0 482 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 ZNF189O75820 626 aaPredicted RBP9.1□□□□□ -0.95
SYN3-211ENST00000472027 ANXA9O76027 345 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 STK10O94804 968 aaKnown RBP9.1□□□□□ -0.95
SYN3-211ENST00000472027 ASMTLO95671 621 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 AGTP01019 485 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 SLC4A1P02730 911 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 PROS1P07225 676 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 GP1BAP07359 652 aa9.1□□□□□ -0.95
SYN3-211ENST00000472027 IVLP07476 585 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms