RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 RDH11Q8TC12 318 aa9.36□□□□□ -0.91
VPS52-216ENST00000471309 OR8D1Q8WZ84 308 aa9.36□□□□□ -0.91
VPS52-216ENST00000471309 ZNF75CPQ92670 426 aaPredicted RBP9.36□□□□□ -0.91
VPS52-216ENST00000471309 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.36□□□□□ -0.91
VPS52-216ENST00000471309 GRAMD1AQ96CP6 724 aa9.36□□□□□ -0.91
VPS52-216ENST00000471309 OLFM1Q99784 485 aa9.36□□□□□ -0.91
VPS52-216ENST00000471309 AARSD1Q9BTE6 412 aaKnown RBP9.36□□□□□ -0.91
VPS52-216ENST00000471309 C1QTNF1Q9BXJ1 281 aa9.36□□□□□ -0.91
VPS52-216ENST00000471309 TMEM245Q9H330 911 aa9.36□□□□□ -0.91
VPS52-216ENST00000471309 RABEP2Q9H5N1 569 aa9.36□□□□□ -0.91
VPS52-216ENST00000471309 MANSC1Q9H8J5 431 aa9.36□□□□□ -0.91
VPS52-216ENST00000471309 BRD9Q9H8M2 597 aa9.36□□□□□ -0.91
VPS52-216ENST00000471309 BPIFA1Q9NP55 256 aa9.36□□□□□ -0.91
VPS52-216ENST00000471309 TMEM216Q9P0N5 145 aa9.36□□□□□ -0.91
VPS52-216ENST00000471309 CD207Q9UJ71 328 aa9.36□□□□□ -0.91
VPS52-216ENST00000471309 MID2Q9UJV3 735 aa9.36□□□□□ -0.91
VPS52-216ENST00000471309 APPL1Q9UKG1 709 aa9.36□□□□□ -0.91
VPS52-216ENST00000471309 COLQQ9Y215 455 aaPredicted RBP9.36□□□□□ -0.91
VPS52-216ENST00000471309 ACOT9Q9Y305 439 aa9.36□□□□□ -0.91
VPS52-216ENST00000471309 USP15Q9Y4E8 981 aaPredicted RBP9.36□□□□□ -0.91
VPS52-216ENST00000471309 COMMD10Q9Y6G5 202 aa9.36□□□□□ -0.91
VPS52-216ENST00000471309 SLC30A1Q9Y6M5 507 aa9.36□□□□□ -0.91
VPS52-216ENST00000471309 NUMBLQ9Y6R0 609 aa9.36□□□□□ -0.91
VPS52-216ENST00000471309 TICRRQ7Z2Z1 1910 aa9.36□□□□□ -0.91
VPS52-216ENST00000471309 TRBV5-4A0A0C4DH59 114 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 GLYATL1P3A0A0U1RQE8 302 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 A0A0U1RQS6 177 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 WDR91A4D1P6 747 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 TRANK1O15050 2925 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 EDF1O60869 148 aaKnown RBP9.35□□□□□ -0.91
VPS52-216ENST00000471309 PLXNA2O75051 1894 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 NDUFS3O75489 264 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 SRP72O76094 671 aaKnown RBP9.35□□□□□ -0.91
VPS52-216ENST00000471309 KLHL2O95198 593 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 CLDN7O95471 211 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 PRAMEF1O95521 474 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 C1SP09871 688 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 PRSS56P0CW18 603 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 CYP2A6P11509 494 aaPredicted RBP9.35□□□□□ -0.91
VPS52-216ENST00000471309 BPIP17213 487 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 ITGALP20701 1170 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 SAT1P21673 171 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 CD9P21926 228 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 SP100P23497 879 aaPredicted RBP9.35□□□□□ -0.91
VPS52-216ENST00000471309 VIPR1P32241 457 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 PTGER3P43115 390 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 ZNF234Q14588 700 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 PCLAFQ15004 111 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 E2F5Q15329 346 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 ZSCAN26Q16670 478 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 ZRANB3Q5FWF4 1079 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 ARSIQ5FYB1 569 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 LYPLAL1Q5VWZ2 237 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 NAIF1Q69YI7 327 aaPredicted RBP9.35□□□□□ -0.91
VPS52-216ENST00000471309 LRRC8EQ6NSJ5 796 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 PSAPL1Q6NUJ1 521 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 C16orf46Q6P387 395 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 ZNF549Q6P9A3 640 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 NUDT18Q6ZVK8 323 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 SNX20Q7Z614 316 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 PIGWQ7Z7B1 504 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 TBC1D1Q86TI0 1168 aaPredicted RBP9.35□□□□□ -0.91
VPS52-216ENST00000471309 TSPAN33Q86UF1 283 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 NUDCD3Q8IVD9 361 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 SUGP1Q8IWZ8 645 aaKnown RBP9.35□□□□□ -0.91
VPS52-216ENST00000471309 PIANPQ8IYJ0 282 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 STK40Q8N2I9 435 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 CCDC63Q8NA47 563 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 TMIEQ8NEW7 156 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 KCTD4Q8WVF5 259 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 PLEKHG4BQ96PX9 1271 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 MTG2Q9H4K7 406 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 NMRAL1Q9HBL8 299 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 GPAMQ9HCL2 828 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 THAP10Q9P2Z0 257 aaPredicted RBP9.35□□□□□ -0.91
VPS52-216ENST00000471309 NFKBIL1Q9UBC1 381 aaPredicted RBP9.35□□□□□ -0.91
VPS52-216ENST00000471309 COPG2Q9UBF2 871 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 B4GALT6Q9UBX8 382 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 CRYL1Q9Y2S2 319 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 VWA7Q9Y334 891 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 STARD13Q9Y3M8 1113 aa9.35□□□□□ -0.91
VPS52-216ENST00000471309 UBA6A0AVT1 1052 aaPredicted RBP9.34□□□□□ -0.91
VPS52-216ENST00000471309 TBC1D3BA6NDS4 549 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 ERICH4A6NGS2 130 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 C16orf96A6NNT2 1141 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 AGAP14A8MT82 685 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 DLL1O00548 723 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 NPC1O15118 1278 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 SNX3O60493 162 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 ESR1P03372 595 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 APODP05090 189 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 CHRM1P11229 460 aaPredicted RBP9.34□□□□□ -0.91
VPS52-216ENST00000471309 NEFHP12036 1026 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 CPA3P15088 417 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 TIMP2P16035 220 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 BGNP21810 368 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 IGFBP4P22692 258 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 RPS3P23396 243 aaKnown RBP eCLIP9.34□□□□□ -0.91
VPS52-216ENST00000471309 ITGB7P26010 798 aa9.34□□□□□ -0.91
VPS52-216ENST00000471309 GMPRP36959 345 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms