RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 LRRC40Q9H9A6 602 aa19.69■□□□□ 0.74
HDAC7-220ENST00000471235 HACD3Q9P035 362 aa19.69■□□□□ 0.74
HDAC7-220ENST00000471235 PAK5Q9P286 719 aa19.69■□□□□ 0.74
HDAC7-220ENST00000471235 NFKBIL1Q9UBC1 381 aaPredicted RBP19.69■□□□□ 0.74
HDAC7-220ENST00000471235 KLF15Q9UIH9 416 aa19.69■□□□□ 0.74
HDAC7-220ENST00000471235 ARHGEF17Q96PE2 2063 aaPredicted RBP19.68■□□□□ 0.74
HDAC7-220ENST00000471235 RGSL1A5PLK6 1076 aa19.68■□□□□ 0.74
HDAC7-220ENST00000471235 CACNB4O00305 520 aaPredicted RBP19.68■□□□□ 0.74
HDAC7-220ENST00000471235 PIAS2O75928 621 aa19.68■□□□□ 0.74
HDAC7-220ENST00000471235 AP2A1O95782 977 aa19.68■□□□□ 0.74
HDAC7-220ENST00000471235 CSF2P04141 144 aa19.68■□□□□ 0.74
HDAC7-220ENST00000471235 HOXC4P09017 264 aaPredicted RBP19.68■□□□□ 0.74
HDAC7-220ENST00000471235 MYCLP1P12525 358 aaPredicted RBP19.68■□□□□ 0.74
HDAC7-220ENST00000471235 CSRP1P21291 193 aaKnown RBP19.68■□□□□ 0.74
HDAC7-220ENST00000471235 RPL22P35268 128 aaKnown RBP19.68■□□□□ 0.74
HDAC7-220ENST00000471235 ACTN2P35609 894 aa19.68■□□□□ 0.74
HDAC7-220ENST00000471235 FDFT1P37268 417 aa19.68■□□□□ 0.74
HDAC7-220ENST00000471235 GPR1P46091 355 aa19.68■□□□□ 0.74
HDAC7-220ENST00000471235 DCDC1P59894 354 aa19.68■□□□□ 0.74
HDAC7-220ENST00000471235 CDK3Q00526 305 aa19.68■□□□□ 0.74
HDAC7-220ENST00000471235 CYP1B1Q16678 543 aa19.68■□□□□ 0.74
HDAC7-220ENST00000471235 HENMT1Q5T8I9 393 aaKnown RBP19.68■□□□□ 0.74
HDAC7-220ENST00000471235 KCTD16Q68DU8 428 aa19.68■□□□□ 0.74
HDAC7-220ENST00000471235 DENND5AQ6IQ26 1287 aa19.68■□□□□ 0.74
HDAC7-220ENST00000471235 GLT6D1Q7Z4J2 308 aa19.68■□□□□ 0.74
HDAC7-220ENST00000471235 PHACTR4Q8IZ21 702 aa19.68■□□□□ 0.74
HDAC7-220ENST00000471235 RBFAQ8N0V3 343 aa19.68■□□□□ 0.74
HDAC7-220ENST00000471235 PDCD7Q8N8D1 485 aaKnown RBP19.68■□□□□ 0.74
HDAC7-220ENST00000471235 CAMK1GQ96NX5 476 aa19.68■□□□□ 0.74
HDAC7-220ENST00000471235 LGR4Q9BXB1 951 aa19.68■□□□□ 0.74
HDAC7-220ENST00000471235 TEX101Q9BY14 249 aa19.68■□□□□ 0.74
HDAC7-220ENST00000471235 TRABDQ9H4I3 376 aa19.68■□□□□ 0.74
HDAC7-220ENST00000471235 ETNK1Q9HBU6 452 aa19.68■□□□□ 0.74
HDAC7-220ENST00000471235 PHPT1Q9NRX4 125 aaPredicted RBP19.68■□□□□ 0.74
HDAC7-220ENST00000471235 CTAGE9A4FU28 777 aa19.67■□□□□ 0.74
HDAC7-220ENST00000471235 TMEM202A6NGA9 273 aa19.67■□□□□ 0.74
HDAC7-220ENST00000471235 H3BM21 787 aa19.67■□□□□ 0.74
HDAC7-220ENST00000471235 HTR1BP28222 390 aa19.67■□□□□ 0.74
HDAC7-220ENST00000471235 SEMA5AQ13591 1074 aa19.67■□□□□ 0.74
HDAC7-220ENST00000471235 SUZ12Q15022 739 aaKnown RBP19.67■□□□□ 0.74
HDAC7-220ENST00000471235 ALG11Q2TAA5 492 aa19.67■□□□□ 0.74
HDAC7-220ENST00000471235 ALS2CLQ60I27 953 aa19.67■□□□□ 0.74
HDAC7-220ENST00000471235 ENPP7Q6UWV6 458 aa19.67■□□□□ 0.74
HDAC7-220ENST00000471235 ADAMTSL4Q6UY14 1074 aa19.67■□□□□ 0.74
HDAC7-220ENST00000471235 GSTA5Q7RTV2 222 aa19.67■□□□□ 0.74
HDAC7-220ENST00000471235 NLRP8Q86W28 1048 aa19.67■□□□□ 0.74
HDAC7-220ENST00000471235 GPR26Q8NDV2 337 aa19.67■□□□□ 0.74
HDAC7-220ENST00000471235 ATL2Q8NHH9 583 aa19.67■□□□□ 0.74
HDAC7-220ENST00000471235 SETD7Q8WTS6 366 aaKnown RBP19.67■□□□□ 0.74
HDAC7-220ENST00000471235 MAGOHBQ96A72 148 aaKnown RBP19.67■□□□□ 0.74
HDAC7-220ENST00000471235 LRRC45Q96CN5 670 aa19.67■□□□□ 0.74
HDAC7-220ENST00000471235 PDXPQ96GD0 296 aa19.67■□□□□ 0.74
HDAC7-220ENST00000471235 TCEAL2Q9H3H9 227 aaPredicted RBP19.67■□□□□ 0.74
HDAC7-220ENST00000471235 FAM83DQ9H4H8 585 aa19.67■□□□□ 0.74
HDAC7-220ENST00000471235 ARNT2Q9HBZ2 717 aa19.67■□□□□ 0.74
HDAC7-220ENST00000471235 FGF22Q9HCT0 170 aa19.67■□□□□ 0.74
HDAC7-220ENST00000471235 UCKL1Q9NWZ5 548 aa19.67■□□□□ 0.74
HDAC7-220ENST00000471235 KLQ9UEF7 1012 aa19.67■□□□□ 0.74
HDAC7-220ENST00000471235 PCOLCE2Q9UKZ9 415 aa19.67■□□□□ 0.74
HDAC7-220ENST00000471235 FADS2P1A8MWK0 482 aa19.66■□□□□ 0.74
HDAC7-220ENST00000471235 PSMD3O43242 534 aa19.66■□□□□ 0.74
HDAC7-220ENST00000471235 PHF2O75151 1096 aa19.66■□□□□ 0.74
HDAC7-220ENST00000471235 PYGLP06737 847 aa19.66■□□□□ 0.74
HDAC7-220ENST00000471235 BPIP17213 487 aa19.66■□□□□ 0.74
HDAC7-220ENST00000471235 JUNDP17535 347 aa19.66■□□□□ 0.74
HDAC7-220ENST00000471235 DGKAP23743 735 aa19.66■□□□□ 0.74
HDAC7-220ENST00000471235 HMGCLP35914 325 aa19.66■□□□□ 0.74
HDAC7-220ENST00000471235 GRK6P43250 576 aa19.66■□□□□ 0.74
HDAC7-220ENST00000471235 NOVA1P51513 510 aaKnown RBP19.66■□□□□ 0.74
HDAC7-220ENST00000471235 HNRNPKP61978 463 aaKnown RBP eCLIP19.66■□□□□ 0.74
HDAC7-220ENST00000471235 MSLNQ13421 630 aaPredicted RBP19.66■□□□□ 0.74
HDAC7-220ENST00000471235 KCTD19Q17RG1 926 aaPredicted RBP19.66■□□□□ 0.74
HDAC7-220ENST00000471235 INAVAQ3KP66 663 aa19.66■□□□□ 0.74
HDAC7-220ENST00000471235 ZNF548Q8NEK5 533 aaPredicted RBP19.66■□□□□ 0.74
HDAC7-220ENST00000471235 BAHD1Q8TBE0 780 aaPredicted RBP19.66■□□□□ 0.74
HDAC7-220ENST00000471235 OR1E3Q8WZA6 343 aa19.66■□□□□ 0.74
HDAC7-220ENST00000471235 BPIFA1Q9NP55 256 aa19.66■□□□□ 0.74
HDAC7-220ENST00000471235 RAB6BQ9NRW1 208 aa19.66■□□□□ 0.74
HDAC7-220ENST00000471235 RAD18Q9NS91 495 aa19.66■□□□□ 0.74
HDAC7-220ENST00000471235 APOBEC3BQ9UH17 382 aaKnown RBP19.66■□□□□ 0.74
HDAC7-220ENST00000471235 FEZ2Q9UHY8 353 aaPredicted RBP19.66■□□□□ 0.74
HDAC7-220ENST00000471235 GOLGA6L10A0A0M3HER8 536 aa19.65■□□□□ 0.74
HDAC7-220ENST00000471235 ERI2A8K979 691 aaKnown RBP19.65■□□□□ 0.74
HDAC7-220ENST00000471235 GIPC1O14908 333 aa19.65■□□□□ 0.74
HDAC7-220ENST00000471235 CBFA2T3O75081 653 aa19.65■□□□□ 0.74
HDAC7-220ENST00000471235 KELP23276 732 aa19.65■□□□□ 0.74
HDAC7-220ENST00000471235 COILP38432 576 aaPredicted RBP19.65■□□□□ 0.74
HDAC7-220ENST00000471235 SRP54P61011 504 aaKnown RBP19.65■□□□□ 0.74
HDAC7-220ENST00000471235 PPARDQ03181 441 aa19.65■□□□□ 0.74
HDAC7-220ENST00000471235 PSAPL1Q6NUJ1 521 aa19.65■□□□□ 0.74
HDAC7-220ENST00000471235 TRIM74Q86UV6 250 aa19.65■□□□□ 0.74
HDAC7-220ENST00000471235 HID1Q8IV36 788 aa19.65■□□□□ 0.74
HDAC7-220ENST00000471235 OR56A4Q8NGH8 313 aa19.65■□□□□ 0.74
HDAC7-220ENST00000471235 TSACCQ96A04 125 aaPredicted RBP19.65■□□□□ 0.74
HDAC7-220ENST00000471235 CAPZA3Q96KX2 299 aa19.65■□□□□ 0.74
HDAC7-220ENST00000471235 LRRC61Q9BV99 259 aa19.65■□□□□ 0.74
HDAC7-220ENST00000471235 FRMD8Q9BZ67 464 aaPredicted RBP19.65■□□□□ 0.74
HDAC7-220ENST00000471235 CDH19Q9H159 772 aa19.65■□□□□ 0.74
HDAC7-220ENST00000471235 SLC32A1Q9H598 525 aa19.65■□□□□ 0.74
HDAC7-220ENST00000471235 MRPL40Q9NQ50 206 aaKnown RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms