RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 ARL14Q8N4G2 192 aa16.25■□□□□ 0.19
COL9A3-208ENST00000469802 SLC35G2Q8TBE7 412 aa16.25■□□□□ 0.19
COL9A3-208ENST00000469802 KIAA1524Q8TCG1 905 aa16.25■□□□□ 0.19
COL9A3-208ENST00000469802 LRRN4Q8WUT4 740 aa16.25■□□□□ 0.19
COL9A3-208ENST00000469802 CHP1Q99653 195 aa16.25■□□□□ 0.19
COL9A3-208ENST00000469802 FOXP3Q9BZS1 431 aa16.25■□□□□ 0.19
COL9A3-208ENST00000469802 DPEP2Q9H4A9 486 aa16.25■□□□□ 0.19
COL9A3-208ENST00000469802 DEF6Q9H4E7 631 aa16.25■□□□□ 0.19
COL9A3-208ENST00000469802 SPATS2LQ9NUQ6 558 aaKnown RBP16.25■□□□□ 0.19
COL9A3-208ENST00000469802 HAUS2Q9NVX0 235 aa16.25■□□□□ 0.19
COL9A3-208ENST00000469802 TAAR2Q9P1P5 351 aa16.25■□□□□ 0.19
COL9A3-208ENST00000469802 CD84Q9UIB8 345 aa16.25■□□□□ 0.19
COL9A3-208ENST00000469802 MOSPD1Q9UJG1 213 aa16.25■□□□□ 0.19
COL9A3-208ENST00000469802 DNPEPQ9ULA0 475 aa16.25■□□□□ 0.19
COL9A3-208ENST00000469802 RPL26L1Q9UNX3 145 aaKnown RBP16.25■□□□□ 0.19
COL9A3-208ENST00000469802 CHKBQ9Y259 395 aa16.25■□□□□ 0.19
COL9A3-208ENST00000469802 AHCTF1Q8WYP5 2266 aa16.24■□□□□ 0.19
COL9A3-208ENST00000469802 GOLGA6CA6NDK9 693 aa16.24■□□□□ 0.19
COL9A3-208ENST00000469802 GOLGA6BA6NDN3 693 aa16.24■□□□□ 0.19
COL9A3-208ENST00000469802 PLD2O14939 933 aa16.24■□□□□ 0.19
COL9A3-208ENST00000469802 AKR1B10O60218 316 aa16.24■□□□□ 0.19
COL9A3-208ENST00000469802 TNFSF15O95150 251 aa16.24■□□□□ 0.19
COL9A3-208ENST00000469802 FGF1P05230 155 aa16.24■□□□□ 0.19
COL9A3-208ENST00000469802 MMP2P08253 660 aa16.24■□□□□ 0.19
COL9A3-208ENST00000469802 GOLGA6DP0CG33 693 aa16.24■□□□□ 0.19
COL9A3-208ENST00000469802 CA4P22748 312 aa16.24■□□□□ 0.19
COL9A3-208ENST00000469802 ARHGAP25P42331 645 aa16.24■□□□□ 0.19
COL9A3-208ENST00000469802 GPR1P46091 355 aa16.24■□□□□ 0.19
COL9A3-208ENST00000469802 GNPDA1P46926 289 aa16.24■□□□□ 0.19
COL9A3-208ENST00000469802 POLD2P49005 469 aa16.24■□□□□ 0.19
COL9A3-208ENST00000469802 INHBCP55103 352 aa16.24■□□□□ 0.19
COL9A3-208ENST00000469802 TMPRSS3P57727 454 aa16.24■□□□□ 0.19
COL9A3-208ENST00000469802 CXADRP78310 365 aa16.24■□□□□ 0.19
COL9A3-208ENST00000469802 IFI35P80217 286 aaPredicted RBP16.24■□□□□ 0.19
COL9A3-208ENST00000469802 ZFP36L1Q07352 338 aaKnown RBP16.24■□□□□ 0.19
COL9A3-208ENST00000469802 MESDQ14696 234 aa16.24■□□□□ 0.19
COL9A3-208ENST00000469802 SLC9A4Q6AI14 798 aa16.24■□□□□ 0.19
COL9A3-208ENST00000469802 CCDC13Q8IYE1 715 aa16.24■□□□□ 0.19
COL9A3-208ENST00000469802 CNTD1Q8N815 330 aa16.24■□□□□ 0.19
COL9A3-208ENST00000469802 SNRNP27Q8WVK2 155 aaKnown RBP16.24■□□□□ 0.19
COL9A3-208ENST00000469802 SCAMP4Q969E2 229 aa16.24■□□□□ 0.19
COL9A3-208ENST00000469802 AP2M1Q96CW1 435 aa16.24■□□□□ 0.19
COL9A3-208ENST00000469802 COX14Q96I36 57 aa16.24■□□□□ 0.19
COL9A3-208ENST00000469802 TMEM74Q96NL1 305 aa16.24■□□□□ 0.19
COL9A3-208ENST00000469802 EPB41L5Q9HCM4 733 aa16.24■□□□□ 0.19
COL9A3-208ENST00000469802 SPTLC3Q9NUV7 552 aa16.24■□□□□ 0.19
COL9A3-208ENST00000469802 ZNHIT6Q9NWK9 470 aaKnown RBP16.24■□□□□ 0.19
COL9A3-208ENST00000469802 GOLGA6AQ9NYA3 693 aa16.24■□□□□ 0.19
COL9A3-208ENST00000469802 LRIT1Q9P2V4 623 aa16.24■□□□□ 0.19
COL9A3-208ENST00000469802 TTLL3Q9Y4R7 772 aa16.24■□□□□ 0.19
COL9A3-208ENST00000469802 PCDHGA7Q9Y5G6 932 aa16.24■□□□□ 0.19
COL9A3-208ENST00000469802 LRRD1A4D1F6 860 aa16.23■□□□□ 0.19
COL9A3-208ENST00000469802 TK2O00142 265 aa16.23■□□□□ 0.19
COL9A3-208ENST00000469802 KLK10O43240 276 aa16.23■□□□□ 0.19
COL9A3-208ENST00000469802 PYGLP06737 847 aa16.23■□□□□ 0.19
COL9A3-208ENST00000469802 AK4P27144 223 aaPredicted RBP16.23■□□□□ 0.19
COL9A3-208ENST00000469802 UGT1A5P35504 534 aa16.23■□□□□ 0.19
COL9A3-208ENST00000469802 EPHB1P54762 984 aa16.23■□□□□ 0.19
COL9A3-208ENST00000469802 MAZP56270 477 aaKnown RBP16.23■□□□□ 0.19
COL9A3-208ENST00000469802 B4GALNT1Q00973 533 aa16.23■□□□□ 0.19
COL9A3-208ENST00000469802 ZBTB17Q13105 803 aa16.23■□□□□ 0.19
COL9A3-208ENST00000469802 TCEAL1Q15170 157 aa16.23■□□□□ 0.19
COL9A3-208ENST00000469802 RAB11FIP2Q7L804 512 aa16.23■□□□□ 0.19
COL9A3-208ENST00000469802 TMPRSS9Q7Z410 1059 aa16.23■□□□□ 0.19
COL9A3-208ENST00000469802 SLITRK4Q8IW52 837 aa16.23■□□□□ 0.19
COL9A3-208ENST00000469802 RHOT2Q8IXI1 618 aa16.23■□□□□ 0.19
COL9A3-208ENST00000469802 NRSN1Q8IZ57 195 aa16.23■□□□□ 0.19
COL9A3-208ENST00000469802 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.23■□□□□ 0.19
COL9A3-208ENST00000469802 Q8N9G6 341 aaPredicted RBP16.23■□□□□ 0.19
COL9A3-208ENST00000469802 LSM14AQ8ND56 463 aaKnown RBP16.23■□□□□ 0.19
COL9A3-208ENST00000469802 ZDHHC1Q8WTX9 485 aa16.23■□□□□ 0.19
COL9A3-208ENST00000469802 OLFM3Q96PB7 478 aa16.23■□□□□ 0.19
COL9A3-208ENST00000469802 AGAP2Q99490 1192 aa16.23■□□□□ 0.19
COL9A3-208ENST00000469802 STRADBQ9C0K7 418 aa16.23■□□□□ 0.19
COL9A3-208ENST00000469802 CDH19Q9H159 772 aa16.23■□□□□ 0.19
COL9A3-208ENST00000469802 NHEJ1Q9H9Q4 299 aaPredicted RBP16.23■□□□□ 0.19
COL9A3-208ENST00000469802 PCDH9Q9HC56 1237 aa16.23■□□□□ 0.19
COL9A3-208ENST00000469802 ACSL6Q9UKU0 697 aa16.23■□□□□ 0.19
COL9A3-208ENST00000469802 ATXN7L1Q9ULK2 861 aaPredicted RBP16.23■□□□□ 0.19
COL9A3-208ENST00000469802 CFAP46Q8IYW2 2715 aa16.23■□□□□ 0.19
COL9A3-208ENST00000469802 KCNK1O00180 336 aa16.22■□□□□ 0.19
COL9A3-208ENST00000469802 ADCY8P40145 1251 aa16.22■□□□□ 0.19
COL9A3-208ENST00000469802 CTBSQ01459 385 aa16.22■□□□□ 0.19
COL9A3-208ENST00000469802 LRRC38Q5VT99 294 aa16.22■□□□□ 0.19
COL9A3-208ENST00000469802 BROXQ5VW32 411 aa16.22■□□□□ 0.19
COL9A3-208ENST00000469802 FOXR1Q6PIV2 292 aa16.22■□□□□ 0.19
COL9A3-208ENST00000469802 SLC30A9Q6PML9 568 aa16.22■□□□□ 0.19
COL9A3-208ENST00000469802 PCSK4Q6UW60 755 aa16.22■□□□□ 0.19
COL9A3-208ENST00000469802 TRIM74Q86UV6 250 aa16.22■□□□□ 0.19
COL9A3-208ENST00000469802 NAGSQ8N159 534 aa16.22■□□□□ 0.19
COL9A3-208ENST00000469802 FBXO39Q8N4B4 442 aa16.22■□□□□ 0.19
COL9A3-208ENST00000469802 CCNYQ8ND76 341 aa16.22■□□□□ 0.19
COL9A3-208ENST00000469802 LPCAT1Q8NF37 534 aa16.22■□□□□ 0.19
COL9A3-208ENST00000469802 CCDC97Q96F63 343 aaPredicted RBP16.22■□□□□ 0.19
COL9A3-208ENST00000469802 ZNF830Q96NB3 372 aaPredicted RBP16.22■□□□□ 0.19
COL9A3-208ENST00000469802 OR2M4Q96R27 311 aa16.22■□□□□ 0.19
COL9A3-208ENST00000469802 WDR24Q96S15 920 aa16.22■□□□□ 0.19
COL9A3-208ENST00000469802 TSPY26PQ9H489 355 aa16.22■□□□□ 0.19
COL9A3-208ENST00000469802 SUDS3Q9H7L9 328 aaPredicted RBP16.22■□□□□ 0.19
COL9A3-208ENST00000469802 CPNE5Q9HCH3 593 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms