RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 ZNF460Q14592 562 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 EIF4HQ15056 248 aaKnown RBP9.32□□□□□ -0.92
SMC1A-205ENST00000469129 PDGFRLQ15198 375 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 DHCR24Q15392 516 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 EML3Q32P44 896 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 ACCSLQ4AC99 568 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 ZNF789Q5FWF6 425 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 CFAP157Q5JU67 520 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 FAM91A1Q658Y4 838 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 GRAMD4Q6IC98 578 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 UGT3A1Q6NUS8 523 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 BRAT1Q6PJG6 821 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 TMC5Q6UXY8 1006 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 TPRG1Q6ZUI0 275 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 PIWIL4Q7Z3Z4 852 aaKnown RBP9.32□□□□□ -0.92
SMC1A-205ENST00000469129 NPAS3Q8IXF0 933 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 CBARPQ8N350 705 aaPredicted RBP9.32□□□□□ -0.92
SMC1A-205ENST00000469129 OR6K2Q8NGY2 324 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 RFWD2Q8NHY2 731 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 ITFG1Q8TB96 612 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 HEXDCQ8WVB3 486 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 STON2Q8WXE9 905 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 PPM1EQ8WY54 764 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 NXNL1Q96CM4 212 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 ECHDC3Q96DC8 303 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 MRPL38Q96DV4 380 aaKnown RBP9.32□□□□□ -0.92
SMC1A-205ENST00000469129 THOC1Q96FV9 657 aaKnown RBP9.32□□□□□ -0.92
SMC1A-205ENST00000469129 LRIG1Q96JA1 1093 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 RPL10LQ96L21 214 aaKnown RBP9.32□□□□□ -0.92
SMC1A-205ENST00000469129 UBXN10Q96LJ8 280 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 FAM161BQ96MY7 647 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 TUBB6Q9BUF5 446 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 OSBPL1AQ9BXW6 950 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 PBX4Q9BYU1 374 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 SUV39H2Q9H5I1 410 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 ZDHHC6Q9H6R6 413 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 SLC28A3Q9HAS3 691 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 RAD18Q9NS91 495 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 IGSF5Q9NSI5 407 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 DNAJC28Q9NX36 388 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 DCTN4Q9UJW0 460 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 TMCO1Q9UM00 188 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 DNAJC16Q9Y2G8 782 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 SLC27A6Q9Y2P4 619 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 CRYL1Q9Y2S2 319 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 PPIL1Q9Y3C6 166 aa9.32□□□□□ -0.92
SMC1A-205ENST00000469129 TCF20Q9UGU0 1960 aaKnown RBP9.32□□□□□ -0.92
SMC1A-205ENST00000469129 LRRK1Q38SD2 2015 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 SLCO1B7G3V0H7 640 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 H3BMM5 538 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 CCDC22O60826 627 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 SMIM24O75264 130 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 ZNF821O75541 412 aaPredicted RBP9.31□□□□□ -0.92
SMC1A-205ENST00000469129 WISP3O95389 354 aaPredicted RBP9.31□□□□□ -0.92
SMC1A-205ENST00000469129 ALPIP09923 528 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 PKMP14618 531 aaKnown RBP9.31□□□□□ -0.92
SMC1A-205ENST00000469129 ALOX15P16050 662 aaPredicted RBP9.31□□□□□ -0.92
SMC1A-205ENST00000469129 ZNF30P17039 623 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 CTPS1P17812 591 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 RPS3P23396 243 aaKnown RBP eCLIP9.31□□□□□ -0.92
SMC1A-205ENST00000469129 PBX2P40425 430 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 CTSOP43234 321 aaPredicted RBP9.31□□□□□ -0.92
SMC1A-205ENST00000469129 MAGEA9P43362 315 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 RASSF2P50749 326 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 CDKN2DP55273 166 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 BNIP1Q12981 228 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 PRKAA1Q13131 559 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 PEX6Q13608 980 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 KCNC3Q14003 757 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 PTPRCAPQ14761 206 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 GALNTL6Q49A17 601 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 GPR33Q49SQ1 333 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 DGKKQ5KSL6 1271 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 RARS2Q5T160 578 aaKnown RBP9.31□□□□□ -0.92
SMC1A-205ENST00000469129 ASTLQ6HA08 431 aaPredicted RBP9.31□□□□□ -0.92
SMC1A-205ENST00000469129 PSAPL1Q6NUJ1 521 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 GET4Q7L5D6 327 aaPredicted RBP9.31□□□□□ -0.92
SMC1A-205ENST00000469129 SNX20Q7Z614 316 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 RAB44Q7Z6P3 723 aaPredicted RBP9.31□□□□□ -0.92
SMC1A-205ENST00000469129 GPR149Q86SP6 731 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 LDB1Q86U70 411 aaPredicted RBP9.31□□□□□ -0.92
SMC1A-205ENST00000469129 ADIPOR2Q86V24 386 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 ADGRG2Q8IZP9 1017 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 RBFAQ8N0V3 343 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 CPA6Q8N4T0 437 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 NKAPQ8N5F7 415 aaKnown RBP9.31□□□□□ -0.92
SMC1A-205ENST00000469129 FITM2Q8N6M3 262 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 KDM1BQ8NB78 822 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 OR6Y1Q8NGX8 325 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 RHEBL1Q8TAI7 183 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 KCNJ9Q92806 393 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 SKA1Q96BD8 255 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 TIFAQ96CG3 184 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 ASIC4Q96FT7 647 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 ZSWIM3Q96MP5 696 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 ASB16Q96NS5 453 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 GPR78Q96P69 363 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 MCCC1Q96RQ3 725 aaPredicted RBP9.31□□□□□ -0.92
SMC1A-205ENST00000469129 HEPHQ9BQS7 1158 aa9.31□□□□□ -0.92
SMC1A-205ENST00000469129 DRC3Q9H069 523 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms