RNA–Protein interactions for RNA: ENST00000468965.2

SCAP-210, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-210ENST00000468965 SERAC1Q96JX3 654 aa13.06□□□□□ -0.32
SCAP-210ENST00000468965 SLC6A18Q96N87 628 aa13.06□□□□□ -0.32
SCAP-210ENST00000468965 LENG8Q96PV6 779 aaPredicted RBP13.06□□□□□ -0.32
SCAP-210ENST00000468965 TRIM56Q9BRZ2 755 aaKnown RBP13.06□□□□□ -0.32
SCAP-210ENST00000468965 PARD6BQ9BYG5 372 aa13.06□□□□□ -0.32
SCAP-210ENST00000468965 FRMD8Q9BZ67 464 aaPredicted RBP13.06□□□□□ -0.32
SCAP-210ENST00000468965 GDF3Q9NR23 364 aa13.06□□□□□ -0.32
SCAP-210ENST00000468965 FAM114A2Q9NRY5 505 aa13.06□□□□□ -0.32
SCAP-210ENST00000468965 NFKBIL1Q9UBC1 381 aaPredicted RBP13.06□□□□□ -0.32
SCAP-210ENST00000468965 SLC2A6Q9UGQ3 507 aa13.06□□□□□ -0.32
SCAP-210ENST00000468965 RAB21Q9UL25 225 aa13.06□□□□□ -0.32
SCAP-210ENST00000468965 SOX13Q9UN79 622 aa13.06□□□□□ -0.32
SCAP-210ENST00000468965 DMTF1Q9Y222 760 aa13.06□□□□□ -0.32
SCAP-210ENST00000468965 ATXN2Q99700 1313 aaKnown RBP13.06□□□□□ -0.32
SCAP-210ENST00000468965 PCDH15Q96QU1 1955 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 RGSL1A5PLK6 1076 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 SDR42E2A6NKP2 422 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 E7ESA3 106 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 PRAMEF26H0Y7S4 382 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 H0Y8X5 98 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 K7ESM1 405 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 PCCBP05166 539 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 NMBRP28336 390 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 TNFRSF8P28908 595 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 ECHS1P30084 290 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 AKT2P31751 481 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 CARSP49589 748 aaKnown RBP13.05□□□□□ -0.32
SCAP-210ENST00000468965 ARSDP51689 593 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 DCDC1P59894 354 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 TMPRSS15P98073 1019 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 CAV1Q03135 178 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 DPTQ07507 201 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 CBLBQ13191 982 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 LRRC14Q15048 493 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 HIF1AQ16665 826 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 BBS9Q3SYG4 887 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 WDR45BQ5MNZ6 344 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 ALS2CLQ60I27 953 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 IGDCC3Q8IVU1 814 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 IFT20Q8IY31 132 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 NRSN1Q8IZ57 195 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 RGL4Q8IZJ4 473 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 ZCCHC9Q8N567 271 aaKnown RBP13.05□□□□□ -0.32
SCAP-210ENST00000468965 SUMF1Q8NBK3 374 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 PPHLN1Q8NEY8 458 aaKnown RBP13.05□□□□□ -0.32
SCAP-210ENST00000468965 OR13J1Q8NGT2 312 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 STYXQ8WUJ0 223 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 ATOH1Q92858 354 aaPredicted RBP13.05□□□□□ -0.32
SCAP-210ENST00000468965 AP2M1Q96CW1 435 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 AGAP2Q99490 1192 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 KIFC1Q9BW19 673 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 C1QTNF7Q9BXJ2 289 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 MIR1-1HGQ9H1L0 117 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 MRM3Q9HC36 420 aaKnown RBP13.05□□□□□ -0.32
SCAP-210ENST00000468965 CHRAC1Q9NRG0 131 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 TREX1Q9NSU2 369 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 TMEM74BQ9NUR3 256 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 NLE1Q9NVX2 485 aaPredicted RBP13.05□□□□□ -0.32
SCAP-210ENST00000468965 FKBPLQ9UIM3 349 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 RIMKLBQ9ULI2 386 aa13.05□□□□□ -0.32
SCAP-210ENST00000468965 SMG5Q9UPR3 1016 aaKnown RBP13.05□□□□□ -0.32
SCAP-210ENST00000468965 A0A1W2PR77 199 aa13.04□□□□□ -0.32
SCAP-210ENST00000468965 POM121BA6NF01 834 aa13.04□□□□□ -0.32
SCAP-210ENST00000468965 EPN2O95208 641 aa13.04□□□□□ -0.32
SCAP-210ENST00000468965 WNT1P04628 370 aa13.04□□□□□ -0.32
SCAP-210ENST00000468965 CA5AP35218 305 aa13.04□□□□□ -0.32
SCAP-210ENST00000468965 SPAM1P38567 509 aa13.04□□□□□ -0.32
SCAP-210ENST00000468965 NBL1P41271 181 aa13.04□□□□□ -0.32
SCAP-210ENST00000468965 ARL4CP56559 192 aa13.04□□□□□ -0.32
SCAP-210ENST00000468965 XIAPP98170 497 aa13.04□□□□□ -0.32
SCAP-210ENST00000468965 PDE1BQ01064 536 aa13.04□□□□□ -0.32
SCAP-210ENST00000468965 ACVR1Q04771 509 aa13.04□□□□□ -0.32
SCAP-210ENST00000468965 PEX6Q13608 980 aa13.04□□□□□ -0.32
SCAP-210ENST00000468965 FASTKD3Q14CZ7 662 aaKnown RBP13.04□□□□□ -0.32
SCAP-210ENST00000468965 DNAJC21Q5F1R6 531 aaKnown RBP13.04□□□□□ -0.32
SCAP-210ENST00000468965 PEAR1Q5VY43 1037 aaPredicted RBP13.04□□□□□ -0.32
SCAP-210ENST00000468965 ESRP1Q6NXG1 681 aaKnown RBP13.04□□□□□ -0.32
SCAP-210ENST00000468965 CES3Q6UWW8 571 aa13.04□□□□□ -0.32
SCAP-210ENST00000468965 NLRP8Q86W28 1048 aa13.04□□□□□ -0.32
SCAP-210ENST00000468965 PDIK1LQ8N165 341 aa13.04□□□□□ -0.32
SCAP-210ENST00000468965 PTCD2Q8WV60 388 aaKnown RBP13.04□□□□□ -0.32
SCAP-210ENST00000468965 IFT81Q8WYA0 676 aa13.04□□□□□ -0.32
SCAP-210ENST00000468965 MFSD3Q96ES6 412 aa13.04□□□□□ -0.32
SCAP-210ENST00000468965 STAMBPL1Q96FJ0 436 aa13.04□□□□□ -0.32
SCAP-210ENST00000468965 BMFQ96LC9 184 aa13.04□□□□□ -0.32
SCAP-210ENST00000468965 TBATAQ96M53 351 aa13.04□□□□□ -0.32
SCAP-210ENST00000468965 PLEKHG4BQ96PX9 1271 aa13.04□□□□□ -0.32
SCAP-210ENST00000468965 C19orf43Q9BQ61 176 aa13.04□□□□□ -0.32
SCAP-210ENST00000468965 RIOK2Q9BVS4 552 aaKnown RBP13.04□□□□□ -0.32
SCAP-210ENST00000468965 FAM83DQ9H4H8 585 aa13.04□□□□□ -0.32
SCAP-210ENST00000468965 PLAC1Q9HBJ0 212 aa13.04□□□□□ -0.32
SCAP-210ENST00000468965 TM9SF3Q9HD45 589 aa13.04□□□□□ -0.32
SCAP-210ENST00000468965 IL26Q9NPH9 171 aa13.04□□□□□ -0.32
SCAP-210ENST00000468965 RAD18Q9NS91 495 aa13.04□□□□□ -0.32
SCAP-210ENST00000468965 KCTD5Q9NXV2 234 aa13.04□□□□□ -0.32
SCAP-210ENST00000468965 PILRBQ9UKJ0 227 aa13.04□□□□□ -0.32
SCAP-210ENST00000468965 FNDC3AQ9Y2H6 1198 aaKnown RBP13.04□□□□□ -0.32
SCAP-210ENST00000468965 PKP3Q9Y446 797 aa13.04□□□□□ -0.32
SCAP-210ENST00000468965 HS3ST3A1Q9Y663 406 aa13.04□□□□□ -0.32
SCAP-210ENST00000468965 ARHGEF17Q96PE2 2063 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms