RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 DOK6Q6PKX4 331 aa24.41■■□□□ 1.5
PTCH1-210ENST00000468211 SLC30A9Q6PML9 568 aa24.41■■□□□ 1.5
PTCH1-210ENST00000468211 TRIM74Q86UV6 250 aa24.41■■□□□ 1.5
PTCH1-210ENST00000468211 ZNF564Q8TBZ8 553 aaPredicted RBP24.41■■□□□ 1.5
PTCH1-210ENST00000468211 KIAA1524Q8TCG1 905 aa24.41■■□□□ 1.5
PTCH1-210ENST00000468211 SCAMP4Q969E2 229 aa24.41■■□□□ 1.5
PTCH1-210ENST00000468211 AGAP2Q99490 1192 aa24.41■■□□□ 1.5
PTCH1-210ENST00000468211 GSDMCQ9BYG8 508 aa24.41■■□□□ 1.5
PTCH1-210ENST00000468211 IFNKQ9P0W0 207 aa24.41■■□□□ 1.5
PTCH1-210ENST00000468211 TMEM98Q9Y2Y6 226 aa24.41■■□□□ 1.5
PTCH1-210ENST00000468211 LUC7L2Q9Y383 392 aaKnown RBP24.41■■□□□ 1.5
PTCH1-210ENST00000468211 ZIC2O95409 532 aaPredicted RBP24.4■■□□□ 1.5
PTCH1-210ENST00000468211 JMJD7P0C870 316 aa24.4■■□□□ 1.5
PTCH1-210ENST00000468211 NFKBIAP25963 317 aa24.4■■□□□ 1.5
PTCH1-210ENST00000468211 ADCY8P40145 1251 aa24.4■■□□□ 1.5
PTCH1-210ENST00000468211 TPM4P67936 248 aa24.4■■□□□ 1.5
PTCH1-210ENST00000468211 HADHQ16836 314 aaKnown RBP24.4■■□□□ 1.5
PTCH1-210ENST00000468211 ANKRD20A8PQ5CZ79 823 aa24.4■■□□□ 1.5
PTCH1-210ENST00000468211 ALG1LQ6GMV1 187 aa24.4■■□□□ 1.5
PTCH1-210ENST00000468211 CCDC81Q6ZN84 652 aa24.4■■□□□ 1.5
PTCH1-210ENST00000468211 ZNF438Q7Z4V0 828 aa24.4■■□□□ 1.5
PTCH1-210ENST00000468211 LRRC49Q8IUZ0 686 aa24.4■■□□□ 1.5
PTCH1-210ENST00000468211 WBP1Q96G27 269 aa24.4■■□□□ 1.5
PTCH1-210ENST00000468211 PACSIN1Q9BY11 444 aa24.4■■□□□ 1.5
PTCH1-210ENST00000468211 POLR1EQ9GZS1 481 aaKnown RBP24.4■■□□□ 1.5
PTCH1-210ENST00000468211 WDR70Q9NW82 654 aa24.4■■□□□ 1.5
PTCH1-210ENST00000468211 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.4■■□□□ 1.5
PTCH1-210ENST00000468211 CHKBQ9Y259 395 aa24.4■■□□□ 1.5
PTCH1-210ENST00000468211 A0A0J9YYE9 177 aa24.39■■□□□ 1.49
PTCH1-210ENST00000468211 MATN3O15232 486 aa24.39■■□□□ 1.49
PTCH1-210ENST00000468211 PRLP01236 227 aa24.39■■□□□ 1.49
PTCH1-210ENST00000468211 TRBC1P01850 177 aa24.39■■□□□ 1.49
PTCH1-210ENST00000468211 IVLP07476 585 aa24.39■■□□□ 1.49
PTCH1-210ENST00000468211 CASP14P31944 242 aa24.39■■□□□ 1.49
PTCH1-210ENST00000468211 GPR1P46091 355 aa24.39■■□□□ 1.49
PTCH1-210ENST00000468211 NIPAL4Q0D2K0 466 aa24.39■■□□□ 1.49
PTCH1-210ENST00000468211 SLC10A2Q12908 348 aaPredicted RBP24.39■■□□□ 1.49
PTCH1-210ENST00000468211 C16orf72Q14CZ0 275 aa24.39■■□□□ 1.49
PTCH1-210ENST00000468211 AMZ1Q400G9 498 aa24.39■■□□□ 1.49
PTCH1-210ENST00000468211 PHF19Q5T6S3 580 aa24.39■■□□□ 1.49
PTCH1-210ENST00000468211 ZNF574Q6ZN55 896 aaPredicted RBP24.39■■□□□ 1.49
PTCH1-210ENST00000468211 USP53Q70EK8 1073 aa24.39■■□□□ 1.49
PTCH1-210ENST00000468211 NAGSQ8N159 534 aa24.39■■□□□ 1.49
PTCH1-210ENST00000468211 PQLC3Q8N755 202 aa24.39■■□□□ 1.49
PTCH1-210ENST00000468211 ARRDC2Q8TBH0 407 aa24.39■■□□□ 1.49
PTCH1-210ENST00000468211 AP2M1Q96CW1 435 aa24.39■■□□□ 1.49
PTCH1-210ENST00000468211 SCARF2Q96GP6 870 aaPredicted RBP24.39■■□□□ 1.49
PTCH1-210ENST00000468211 CCNL2Q96S94 520 aaPredicted RBP24.39■■□□□ 1.49
PTCH1-210ENST00000468211 NUDT22Q9BRQ3 303 aa24.39■■□□□ 1.49
PTCH1-210ENST00000468211 RBM22Q9NW64 420 aaKnown RBP eCLIP24.39■■□□□ 1.49
PTCH1-210ENST00000468211 ACSL6Q9UKU0 697 aa24.39■■□□□ 1.49
PTCH1-210ENST00000468211 PRAMEF33A0A0G2JMD5 474 aa24.38■■□□□ 1.49
PTCH1-210ENST00000468211 NVLO15381 856 aaKnown RBP24.38■■□□□ 1.49
PTCH1-210ENST00000468211 PRAMEF10O60809 474 aa24.38■■□□□ 1.49
PTCH1-210ENST00000468211 PROSCO94903 275 aa24.38■■□□□ 1.49
PTCH1-210ENST00000468211 ALDH4A1P30038 563 aa24.38■■□□□ 1.49
PTCH1-210ENST00000468211 GBE1Q04446 702 aa24.38■■□□□ 1.49
PTCH1-210ENST00000468211 NR1D2Q14995 579 aa24.38■■□□□ 1.49
PTCH1-210ENST00000468211 MAP9Q49MG5 647 aa24.38■■□□□ 1.49
PTCH1-210ENST00000468211 FAM182AQ5T1J6 154 aa24.38■■□□□ 1.49
PTCH1-210ENST00000468211 ADAMTSL4Q6UY14 1074 aa24.38■■□□□ 1.49
PTCH1-210ENST00000468211 KCTD6Q8NC69 237 aa24.38■■□□□ 1.49
PTCH1-210ENST00000468211 TSGA13Q96PP4 275 aa24.38■■□□□ 1.49
PTCH1-210ENST00000468211 ZNF670Q9BS34 389 aa24.38■■□□□ 1.49
PTCH1-210ENST00000468211 FOXJ2Q9P0K8 574 aa24.38■■□□□ 1.49
PTCH1-210ENST00000468211 CTTNBP2NLQ9P2B4 639 aa24.38■■□□□ 1.49
PTCH1-210ENST00000468211 SDK2Q58EX2 2172 aa24.37■■□□□ 1.49
PTCH1-210ENST00000468211 RHPN2P1A8MT19 583 aa24.37■■□□□ 1.49
PTCH1-210ENST00000468211 CPNE6O95741 557 aa24.37■■□□□ 1.49
PTCH1-210ENST00000468211 HLA-DQB2P05538 268 aa24.37■■□□□ 1.49
PTCH1-210ENST00000468211 PLA2G2AP14555 144 aa24.37■■□□□ 1.49
PTCH1-210ENST00000468211 CCNCP24863 283 aa24.37■■□□□ 1.49
PTCH1-210ENST00000468211 STC1P52823 247 aa24.37■■□□□ 1.49
PTCH1-210ENST00000468211 IFI16Q16666 785 aaKnown RBP24.37■■□□□ 1.49
PTCH1-210ENST00000468211 USP7Q93009 1102 aa24.37■■□□□ 1.49
PTCH1-210ENST00000468211 FAF2Q96CS3 445 aa24.37■■□□□ 1.49
PTCH1-210ENST00000468211 IQCDQ96DY2 449 aa24.37■■□□□ 1.49
PTCH1-210ENST00000468211 TDRD1Q9BXT4 1180 aaKnown RBP24.37■■□□□ 1.49
PTCH1-210ENST00000468211 TTLL3Q9Y4R7 772 aa24.37■■□□□ 1.49
PTCH1-210ENST00000468211 PCYT1BQ9Y5K3 369 aaPredicted RBP24.37■■□□□ 1.49
PTCH1-210ENST00000468211 CAPN8A6NHC0 703 aa24.36■■□□□ 1.49
PTCH1-210ENST00000468211 PPM1DO15297 605 aa24.36■■□□□ 1.49
PTCH1-210ENST00000468211 CD1CP29017 333 aa24.36■■□□□ 1.49
PTCH1-210ENST00000468211 MAPK10P53779 464 aa24.36■■□□□ 1.49
PTCH1-210ENST00000468211 MARK2Q7KZI7 788 aaKnown RBP24.36■■□□□ 1.49
PTCH1-210ENST00000468211 ZNF605Q86T29 641 aa24.36■■□□□ 1.49
PTCH1-210ENST00000468211 PIM3Q86V86 326 aa24.36■■□□□ 1.49
PTCH1-210ENST00000468211 ZFAND4Q86XD8 727 aa24.36■■□□□ 1.49
PTCH1-210ENST00000468211 RCBTB1Q8NDN9 531 aa24.36■■□□□ 1.49
PTCH1-210ENST00000468211 FATE1Q969F0 183 aa24.36■■□□□ 1.49
PTCH1-210ENST00000468211 OR2M4Q96R27 311 aa24.36■■□□□ 1.49
PTCH1-210ENST00000468211 CMKLR1Q99788 373 aa24.36■■□□□ 1.49
PTCH1-210ENST00000468211 RIOK2Q9BVS4 552 aaKnown RBP24.36■■□□□ 1.49
PTCH1-210ENST00000468211 TENM4Q6N022 2769 aa24.36■■□□□ 1.49
PTCH1-210ENST00000468211 C9orf172C9J069 976 aa24.35■■□□□ 1.49
PTCH1-210ENST00000468211 GOLGA6L19H0YKK7 550 aa24.35■■□□□ 1.49
PTCH1-210ENST00000468211 INPP4BO15327 924 aa24.35■■□□□ 1.49
PTCH1-210ENST00000468211 CLDN7O95471 211 aa24.35■■□□□ 1.49
PTCH1-210ENST00000468211 CCL4P13236 92 aa24.35■■□□□ 1.49
PTCH1-210ENST00000468211 KRT10P13645 584 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms