RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 RBFAQ8N0V3 343 aa10.16□□□□□ -0.78
MSH5-213ENST00000468136 RYBPQ8N488 228 aaPredicted RBP10.16□□□□□ -0.78
MSH5-213ENST00000468136 TMEM151AQ8N4L1 468 aa10.16□□□□□ -0.78
MSH5-213ENST00000468136 CHCHD4Q8N4Q1 142 aa10.16□□□□□ -0.78
MSH5-213ENST00000468136 STAG3L4Q8TBR4 150 aa10.16□□□□□ -0.78
MSH5-213ENST00000468136 UCMAQ8WVF2 138 aa10.16□□□□□ -0.78
MSH5-213ENST00000468136 NXNL1Q96CM4 212 aa10.16□□□□□ -0.78
MSH5-213ENST00000468136 ERP27Q96DN0 273 aa10.16□□□□□ -0.78
MSH5-213ENST00000468136 PDLIM5Q96HC4 596 aaKnown RBP10.16□□□□□ -0.78
MSH5-213ENST00000468136 RMDN2Q96LZ7 410 aa10.16□□□□□ -0.78
MSH5-213ENST00000468136 ASB16Q96NS5 453 aa10.16□□□□□ -0.78
MSH5-213ENST00000468136 TMEM237Q96Q45 408 aa10.16□□□□□ -0.78
MSH5-213ENST00000468136 SMG9Q9H0W8 520 aaKnown RBP10.16□□□□□ -0.78
MSH5-213ENST00000468136 SLC28A3Q9HAS3 691 aa10.16□□□□□ -0.78
MSH5-213ENST00000468136 KCNK13Q9HB14 408 aa10.16□□□□□ -0.78
MSH5-213ENST00000468136 IGSF5Q9NSI5 407 aa10.16□□□□□ -0.78
MSH5-213ENST00000468136 ABCF3Q9NUQ8 709 aa10.16□□□□□ -0.78
MSH5-213ENST00000468136 POLR3BQ9NW08 1133 aaPredicted RBP10.16□□□□□ -0.78
MSH5-213ENST00000468136 PLK2Q9NYY3 685 aa10.16□□□□□ -0.78
MSH5-213ENST00000468136 LMCD1Q9NZU5 365 aa10.16□□□□□ -0.78
MSH5-213ENST00000468136 MARCH4Q9P2E8 410 aaPredicted RBP10.16□□□□□ -0.78
MSH5-213ENST00000468136 XPR1Q9UBH6 696 aa10.16□□□□□ -0.78
MSH5-213ENST00000468136 GNPTGQ9UJJ9 305 aa10.16□□□□□ -0.78
MSH5-213ENST00000468136 TRIM33Q9UPN9 1127 aa10.16□□□□□ -0.78
MSH5-213ENST00000468136 ERVW-1Q9UQF0 538 aa10.16□□□□□ -0.78
MSH5-213ENST00000468136 KCTD3Q9Y597 815 aa10.16□□□□□ -0.78
MSH5-213ENST00000468136 OAS3Q9Y6K5 1087 aaKnown RBP10.16□□□□□ -0.78
MSH5-213ENST00000468136 BRCA2P51587 3418 aa10.16□□□□□ -0.78
MSH5-213ENST00000468136 TRBV5-4A0A0C4DH59 114 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 C1orf232A0A0U1RR37 186 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 TRPC5OSA6NMA1 111 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 K7ERQ8 282 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 QSOX1O00391 747 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 PER2O15055 1255 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 NPC1O15118 1278 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 GJB3O75712 270 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 MYOGP15173 224 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 CALB2P22676 271 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 SLC8A1P32418 973 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 NRIP1P48552 1158 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 RGS4P49798 205 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 RPL14P50914 215 aaKnown RBP10.15□□□□□ -0.78
MSH5-213ENST00000468136 CCNHP51946 323 aaPredicted RBP10.15□□□□□ -0.78
MSH5-213ENST00000468136 DCDC1P59894 354 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 XIAPP98170 497 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 IRF9Q00978 393 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 PEX6Q13608 980 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 EML3Q32P44 896 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 ACCSLQ4AC99 568 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 ZRANB3Q5FWF4 1079 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 SH2D4BQ5SQS7 431 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 RBM20Q5T481 1227 aaKnown RBP10.15□□□□□ -0.78
MSH5-213ENST00000468136 METTL2BQ6P1Q9 378 aaKnown RBP10.15□□□□□ -0.78
MSH5-213ENST00000468136 TXNDC11Q6PKC3 985 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 GDPD4Q6W3E5 623 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 CLNKQ7Z7G1 428 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 RNF135Q8IUD6 432 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 MFSD6LQ8IWD5 586 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 NPAS3Q8IXF0 933 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 TNS4Q8IZW8 715 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 TTC16Q8NEE8 873 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 BHMTQ93088 406 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 KIAA1191Q96A73 305 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 SKA1Q96BD8 255 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 TIFAQ96CG3 184 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 ASIC4Q96FT7 647 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 NSMCE3Q96MG7 304 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 OLFM1Q99784 485 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 GATA5Q9BWX5 397 aaPredicted RBP10.15□□□□□ -0.78
MSH5-213ENST00000468136 SUDS3Q9H7L9 328 aaPredicted RBP10.15□□□□□ -0.78
MSH5-213ENST00000468136 PFDN4Q9NQP4 134 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 PKD2L2Q9NZM6 624 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 HEY2Q9UBP5 337 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 FKBPLQ9UIM3 349 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 LNPEPQ9UIQ6 1025 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 TRMT6Q9UJA5 497 aaKnown RBP10.15□□□□□ -0.78
MSH5-213ENST00000468136 DCTN4Q9UJW0 460 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 PRDM4Q9UKN5 801 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 CLEC4EQ9ULY5 219 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 PLA2G4CQ9UP65 541 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 DNAJC16Q9Y2G8 782 aa10.15□□□□□ -0.78
MSH5-213ENST00000468136 NUP210Q8TEM1 1887 aaPredicted RBP10.15□□□□□ -0.79
MSH5-213ENST00000468136 GLYATL1P3A0A0U1RQE8 302 aa10.14□□□□□ -0.79
MSH5-213ENST00000468136 UBA6A0AVT1 1052 aaPredicted RBP10.14□□□□□ -0.79
MSH5-213ENST00000468136 AGAP14A8MT82 685 aa10.14□□□□□ -0.79
MSH5-213ENST00000468136 E5RI56 91 aa10.14□□□□□ -0.79
MSH5-213ENST00000468136 TK2O00142 265 aa10.14□□□□□ -0.79
MSH5-213ENST00000468136 PSMD11O00231 422 aa10.14□□□□□ -0.79
MSH5-213ENST00000468136 SCAMP3O14828 347 aaKnown RBP10.14□□□□□ -0.79
MSH5-213ENST00000468136 HDAC3O15379 428 aa10.14□□□□□ -0.79
MSH5-213ENST00000468136 DLX3O60479 287 aa10.14□□□□□ -0.79
MSH5-213ENST00000468136 KERAO60938 352 aa10.14□□□□□ -0.79
MSH5-213ENST00000468136 ARHGEF15O94989 841 aa10.14□□□□□ -0.79
MSH5-213ENST00000468136 PRNPP04156 253 aa10.14□□□□□ -0.79
MSH5-213ENST00000468136 CYP17A1P05093 508 aa10.14□□□□□ -0.79
MSH5-213ENST00000468136 CISD3P0C7P0 127 aa10.14□□□□□ -0.79
MSH5-213ENST00000468136 PIRTP0C851 137 aa10.14□□□□□ -0.79
MSH5-213ENST00000468136 CBSLP0DN79 551 aa10.14□□□□□ -0.79
MSH5-213ENST00000468136 CD1DP15813 335 aa10.14□□□□□ -0.79
MSH5-213ENST00000468136 IMPDH1P20839 514 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms