RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 UBE2Q2Q8WVN8 375 aa10.18□□□□□ -0.78
HDAC3-203ENST00000467533 PGAP3Q96FM1 320 aaPredicted RBP10.18□□□□□ -0.78
HDAC3-203ENST00000467533 TSG101Q99816 390 aa10.18□□□□□ -0.78
HDAC3-203ENST00000467533 TEX101Q9BY14 249 aa10.18□□□□□ -0.78
HDAC3-203ENST00000467533 GPR87Q9BY21 358 aa10.18□□□□□ -0.78
HDAC3-203ENST00000467533 LATS2Q9NRM7 1088 aa10.18□□□□□ -0.78
HDAC3-203ENST00000467533 LHX3Q9UBR4 397 aa10.18□□□□□ -0.78
HDAC3-203ENST00000467533 B3GNT3Q9Y2A9 372 aa10.18□□□□□ -0.78
HDAC3-203ENST00000467533 SSU72P8A0A1W2PR75 194 aa10.17□□□□□ -0.78
HDAC3-203ENST00000467533 GOLGA6L3A6NEY3 463 aa10.17□□□□□ -0.78
HDAC3-203ENST00000467533 A8MX80 341 aa10.17□□□□□ -0.78
HDAC3-203ENST00000467533 RASSF9O75901 435 aa10.17□□□□□ -0.78
HDAC3-203ENST00000467533 TMEM63AO94886 807 aa10.17□□□□□ -0.78
HDAC3-203ENST00000467533 IVLP07476 585 aa10.17□□□□□ -0.78
HDAC3-203ENST00000467533 RHOQP17081 205 aa10.17□□□□□ -0.78
HDAC3-203ENST00000467533 GM2AP17900 193 aa10.17□□□□□ -0.78
HDAC3-203ENST00000467533 HNRNPH3P31942 346 aaKnown RBP10.17□□□□□ -0.78
HDAC3-203ENST00000467533 SNX16P57768 344 aa10.17□□□□□ -0.78
HDAC3-203ENST00000467533 CDK3Q00526 305 aa10.17□□□□□ -0.78
HDAC3-203ENST00000467533 KYNUQ16719 465 aa10.17□□□□□ -0.78
HDAC3-203ENST00000467533 SLC25A52Q3SY17 297 aa10.17□□□□□ -0.78
HDAC3-203ENST00000467533 RAET1GQ6H3X3 334 aa10.17□□□□□ -0.78
HDAC3-203ENST00000467533 FAM199XQ6PEV8 388 aaPredicted RBP10.17□□□□□ -0.78
HDAC3-203ENST00000467533 DPPA4Q7L190 304 aa10.17□□□□□ -0.78
HDAC3-203ENST00000467533 CDH24Q86UP0 819 aa10.17□□□□□ -0.78
HDAC3-203ENST00000467533 NLRP14Q86W24 1093 aa10.17□□□□□ -0.78
HDAC3-203ENST00000467533 PPP1R3BQ86XI6 285 aa10.17□□□□□ -0.78
HDAC3-203ENST00000467533 CAMK1DQ8IU85 385 aa10.17□□□□□ -0.78
HDAC3-203ENST00000467533 NXPE1Q8N323 547 aa10.17□□□□□ -0.78
HDAC3-203ENST00000467533 SH3KBP1Q96B97 665 aa10.17□□□□□ -0.78
HDAC3-203ENST00000467533 C9orf72Q96LT7 481 aa10.17□□□□□ -0.78
HDAC3-203ENST00000467533 ZNF641Q96N77 438 aaPredicted RBP10.17□□□□□ -0.78
HDAC3-203ENST00000467533 TBC1D10AQ9BXI6 508 aa10.17□□□□□ -0.78
HDAC3-203ENST00000467533 EPB41L1Q9H4G0 881 aa10.17□□□□□ -0.78
HDAC3-203ENST00000467533 SARS2Q9NP81 518 aaKnown RBP10.17□□□□□ -0.78
HDAC3-203ENST00000467533 AGPAT4Q9NRZ5 378 aa10.17□□□□□ -0.78
HDAC3-203ENST00000467533 TMEM248Q9NWD8 314 aa10.17□□□□□ -0.78
HDAC3-203ENST00000467533 CNOT8Q9UFF9 292 aaKnown RBP10.17□□□□□ -0.78
HDAC3-203ENST00000467533 USP25Q9UHP3 1055 aa10.17□□□□□ -0.78
HDAC3-203ENST00000467533 CNTN6Q9UQ52 1028 aa10.17□□□□□ -0.78
HDAC3-203ENST00000467533 DCHS2Q6V1P9 2916 aa10.17□□□□□ -0.78
HDAC3-203ENST00000467533 TIAF1O95411 115 aa10.16□□□□□ -0.78
HDAC3-203ENST00000467533 EML2O95834 649 aa10.16□□□□□ -0.78
HDAC3-203ENST00000467533 FGF5P12034 268 aa10.16□□□□□ -0.78
HDAC3-203ENST00000467533 PFKFB1P16118 471 aa10.16□□□□□ -0.78
HDAC3-203ENST00000467533 SERPINA4P29622 427 aa10.16□□□□□ -0.78
HDAC3-203ENST00000467533 GLRBP48167 497 aa10.16□□□□□ -0.78
HDAC3-203ENST00000467533 HDAC4P56524 1084 aa10.16□□□□□ -0.78
HDAC3-203ENST00000467533 FKBP3Q00688 224 aaKnown RBP10.16□□□□□ -0.78
HDAC3-203ENST00000467533 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.16□□□□□ -0.78
HDAC3-203ENST00000467533 PTPN20Q4JDL3 420 aa10.16□□□□□ -0.78
HDAC3-203ENST00000467533 INO80DQ53TQ3 878 aaPredicted RBP10.16□□□□□ -0.78
HDAC3-203ENST00000467533 VWA5B1Q5TIE3 1220 aa10.16□□□□□ -0.78
HDAC3-203ENST00000467533 LYPLAL1Q5VWZ2 237 aa10.16□□□□□ -0.78
HDAC3-203ENST00000467533 DENND2CQ68D51 928 aa10.16□□□□□ -0.78
HDAC3-203ENST00000467533 CYB5D1Q6P9G0 228 aa10.16□□□□□ -0.78
HDAC3-203ENST00000467533 ZNF517Q6ZMY9 492 aaPredicted RBP10.16□□□□□ -0.78
HDAC3-203ENST00000467533 MARK2Q7KZI7 788 aaKnown RBP10.16□□□□□ -0.78
HDAC3-203ENST00000467533 PHLDB2Q86SQ0 1253 aa10.16□□□□□ -0.78
HDAC3-203ENST00000467533 FJX1Q86VR8 437 aa10.16□□□□□ -0.78
HDAC3-203ENST00000467533 WDTC1Q8N5D0 677 aa10.16□□□□□ -0.78
HDAC3-203ENST00000467533 LMO3Q8TAP4 145 aa10.16□□□□□ -0.78
HDAC3-203ENST00000467533 NT5C3BQ969T7 300 aa10.16□□□□□ -0.78
HDAC3-203ENST00000467533 TGM7Q96PF1 710 aa10.16□□□□□ -0.78
HDAC3-203ENST00000467533 SMAD5Q99717 465 aaKnown RBP10.16□□□□□ -0.78
HDAC3-203ENST00000467533 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.16□□□□□ -0.78
HDAC3-203ENST00000467533 ATP13A3Q9H7F0 1226 aa10.16□□□□□ -0.78
HDAC3-203ENST00000467533 TMEM51Q9NW97 253 aa10.16□□□□□ -0.78
HDAC3-203ENST00000467533 SLC17A4Q9Y2C5 497 aa10.16□□□□□ -0.78
HDAC3-203ENST00000467533 NTNG1Q9Y2I2 539 aa10.16□□□□□ -0.78
HDAC3-203ENST00000467533 NIPBLQ6KC79 2804 aaeCLIP10.16□□□□□ -0.78
HDAC3-203ENST00000467533 A0A1B0GVL5 298 aa10.15□□□□□ -0.78
HDAC3-203ENST00000467533 PPP1R3GB7ZBB8 358 aa10.15□□□□□ -0.78
HDAC3-203ENST00000467533 BPIP17213 487 aa10.15□□□□□ -0.78
HDAC3-203ENST00000467533 LPOP22079 712 aaPredicted RBP10.15□□□□□ -0.78
HDAC3-203ENST00000467533 USP8P40818 1118 aa10.15□□□□□ -0.78
HDAC3-203ENST00000467533 PDE1BQ01064 536 aa10.15□□□□□ -0.78
HDAC3-203ENST00000467533 ART3Q13508 389 aa10.15□□□□□ -0.78
HDAC3-203ENST00000467533 FAM102AQ5T9C2 384 aaPredicted RBP10.15□□□□□ -0.78
HDAC3-203ENST00000467533 MANEALQ5VSG8 457 aa10.15□□□□□ -0.78
HDAC3-203ENST00000467533 FOXD4L5Q5VV16 416 aaPredicted RBP10.15□□□□□ -0.78
HDAC3-203ENST00000467533 AFMIDQ63HM1 303 aa10.15□□□□□ -0.78
HDAC3-203ENST00000467533 HGSNATQ68CP4 663 aa10.15□□□□□ -0.78
HDAC3-203ENST00000467533 SLC9B2Q86UD5 537 aa10.15□□□□□ -0.78
HDAC3-203ENST00000467533 GALNT13Q8IUC8 556 aa10.15□□□□□ -0.78
HDAC3-203ENST00000467533 ZDHHC17Q8IUH5 632 aa10.15□□□□□ -0.78
HDAC3-203ENST00000467533 FNIP1Q8TF40 1166 aa10.15□□□□□ -0.78
HDAC3-203ENST00000467533 FOXD4L4Q8WXT5 416 aaPredicted RBP10.15□□□□□ -0.78
HDAC3-203ENST00000467533 TBC1D31Q96DN5 1066 aa10.15□□□□□ -0.78
HDAC3-203ENST00000467533 COQ10AQ96MF6 247 aa10.15□□□□□ -0.78
HDAC3-203ENST00000467533 TUBGCP5Q96RT8 1024 aa10.15□□□□□ -0.78
HDAC3-203ENST00000467533 TRIM8Q9BZR9 551 aa10.15□□□□□ -0.78
HDAC3-203ENST00000467533 KLC2Q9H0B6 622 aa10.15□□□□□ -0.78
HDAC3-203ENST00000467533 AKIRIN1Q9H9L7 192 aaPredicted RBP10.15□□□□□ -0.78
HDAC3-203ENST00000467533 C5AR2Q9P296 337 aa10.15□□□□□ -0.78
HDAC3-203ENST00000467533 UBA2Q9UBT2 640 aaPredicted RBP10.15□□□□□ -0.78
HDAC3-203ENST00000467533 OR12D3Q9UGF7 316 aa10.15□□□□□ -0.78
HDAC3-203ENST00000467533 FARSAQ9Y285 508 aaKnown RBP10.15□□□□□ -0.78
HDAC3-203ENST00000467533 KLF2Q9Y5W3 355 aaPredicted RBP10.15□□□□□ -0.78
HDAC3-203ENST00000467533 ANKHD1Q8IWZ3 2542 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms