RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 C2orf40Q9H1Z8 148 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 TTYH1Q9H313 450 aaPredicted RBP3.84□□□□□ -1.79
VPS50-209ENST00000467326 RABEP2Q9H5N1 569 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 CYSLTR2Q9NS75 346 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 HPF1Q9NWY4 346 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 IL1RAPL1Q9NZN1 696 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 PEMTQ9UBM1 199 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 TBK1Q9UHD2 729 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 BLOC1S6Q9UL45 172 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 TBX20Q9UMR3 447 aa3.84□□□□□ -1.79
VPS50-209ENST00000467326 A0A0U1RQF3 1178 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 A0A0U1RQJ8 604 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 CCDC69A6NI79 296 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 PI4K2BG5E9Z4 385 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 PTP4A3O75365 173 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 RGS11O94810 467 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 SLU7O95391 586 aaKnown RBP3.83□□□□□ -1.8
VPS50-209ENST00000467326 VNN2O95498 520 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 QDPRP09417 244 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 HLA-DPA1P20036 260 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 IL11P20809 199 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 POU1F1P28069 291 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 EEF1DP29692 281 aaKnown RBP3.83□□□□□ -1.8
VPS50-209ENST00000467326 FMO4P31512 558 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 PGM1P36871 562 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 NNMTP40261 264 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 CXCR3P49682 368 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 COMPP49747 757 aaPredicted RBP3.83□□□□□ -1.8
VPS50-209ENST00000467326 TUBA1BP68363 451 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 UBXN2AP68543 259 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 IFI35P80217 286 aaPredicted RBP3.83□□□□□ -1.8
VPS50-209ENST00000467326 CYP4A11Q02928 519 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 PPARDQ03181 441 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.83□□□□□ -1.8
VPS50-209ENST00000467326 AP1B1Q10567 949 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 LRMPQ12912 555 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 BFSP1Q12934 665 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 COASYQ13057 564 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 TDGQ13569 410 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 ACVR2BQ13705 512 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 COG2Q14746 738 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 ARHGEF6Q15052 776 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 NFIL3Q16649 462 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 C1orf141Q5JVX7 400 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 SERTAD4-AS1Q5TG53 156 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 RPUSD3Q6P087 351 aaKnown RBP3.83□□□□□ -1.8
VPS50-209ENST00000467326 TATDN1Q6P1N9 297 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 SLC22A25Q6T423 547 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 PRSS57Q6UWY2 283 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 LRRC8DQ7L1W4 858 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 ARMC9Q7Z3E5 817 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 DNAJB7Q7Z6W7 309 aaPredicted RBP3.83□□□□□ -1.8
VPS50-209ENST00000467326 CPLX4Q7Z7G2 160 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 KIAA2013Q8IYS2 634 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 PARP16Q8N5Y8 322 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.83□□□□□ -1.8
VPS50-209ENST00000467326 SPC24Q8NBT2 197 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 LMO3Q8TAP4 145 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 SPATA18Q8TC71 538 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 JAKMIP2Q96AA8 810 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 ADGRG7Q96K78 797 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 FSD1Q9BTV5 496 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 MMTAG2Q9BU76 263 aaKnown RBP3.83□□□□□ -1.8
VPS50-209ENST00000467326 AGXT2Q9BYV1 514 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 NUF2Q9BZD4 464 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 GPR63Q9BZJ6 419 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 INTS2Q9H0H0 1204 aaKnown RBP3.83□□□□□ -1.8
VPS50-209ENST00000467326 CHMP4BQ9H444 224 aaKnown RBP3.83□□□□□ -1.8
VPS50-209ENST00000467326 SNTG1Q9NSN8 517 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 TMEM160Q9NX00 188 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 CPSF2Q9P2I0 782 aaKnown RBP3.83□□□□□ -1.8
VPS50-209ENST00000467326 CNOT7Q9UIV1 285 aaKnown RBP3.83□□□□□ -1.8
VPS50-209ENST00000467326 CARD8Q9Y2G2 431 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 A3GALT2U3KPV4 340 aa3.83□□□□□ -1.8
VPS50-209ENST00000467326 FLT1P17948 1338 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 SYNJ2BP-COX16A0A087WUM0 186 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 GOLGA6L10A0A0M3HER8 536 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 DENND3A2RUS2 1198 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 J3KR12 359 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 GOSR1O95249 250 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 ADRB2P07550 413 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 CCDC159P0C7I6 412 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 CSH1P0DML2 217 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 CSH2P0DML3 217 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 DAOP14920 347 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 EDN2P20800 178 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 HSD17B7P56937 341 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 CLDN2P57739 230 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 RPL36AP83881 106 aaKnown RBP3.82□□□□□ -1.8
VPS50-209ENST00000467326 EFNB1P98172 346 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 MC1RQ01726 317 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 CREB5Q02930 508 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 DDR1Q08345 913 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 TFCP2Q12800 502 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 MYBPHQ13203 477 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 TMED1Q13445 227 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 DHX34Q14147 1143 aaKnown RBP3.82□□□□□ -1.8
VPS50-209ENST00000467326 SLC39A14Q15043 492 aa3.82□□□□□ -1.8
VPS50-209ENST00000467326 SETMARQ53H47 684 aaPredicted RBP3.82□□□□□ -1.8
VPS50-209ENST00000467326 NAA35Q5VZE5 725 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms