RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 MT-CO1P00395 513 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 MTHFD2P13995 350 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 ATP6V1C1P21283 382 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 MTTPP55157 894 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 PSAPL1Q6NUJ1 521 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 HERC6Q8IVU3 1022 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 KBTBD2Q8IY47 623 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 PELI3Q8N2H9 469 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 PTGR2Q8N8N7 351 aaPredicted RBP11.4□□□□□ -0.58
HPS1-208ENST00000467246 KYQ8NBH2 561 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 SLC26A7Q8TE54 656 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 L3HYPDHQ96EM0 354 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 FEM1AQ9BSK4 669 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 FKBPLQ9UIM3 349 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 STOML2Q9UJZ1 356 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 VPS28Q9UK41 221 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 IKZF3Q9UKT9 509 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 CORO1CQ9ULV4 474 aaPredicted RBP11.4□□□□□ -0.58
HPS1-208ENST00000467246 FCF1Q9Y324 198 aaKnown RBP11.4□□□□□ -0.58
HPS1-208ENST00000467246 TRAF6Q9Y4K3 522 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 INSL5Q9Y5Q6 135 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 K7ERQ8 282 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 OR1I1O60431 355 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 SRP72O76094 671 aaKnown RBP11.4□□□□□ -0.58
HPS1-208ENST00000467246 RHOBTB1O94844 696 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 URODP06132 367 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 PYGLP06737 847 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 BMP1P13497 986 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 LPOP22079 712 aaPredicted RBP11.4□□□□□ -0.58
HPS1-208ENST00000467246 HERVK_113P63132 956 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 BLMHQ13867 455 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 PFKFB4Q16877 469 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 ATXN7L2Q5T6C5 722 aaPredicted RBP11.4□□□□□ -0.58
HPS1-208ENST00000467246 AFTPHQ6ULP2 937 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 CYHR1Q6ZMK1 362 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 RNF111Q6ZNA4 994 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 TMA16Q96EY4 203 aaKnown RBP11.4□□□□□ -0.58
HPS1-208ENST00000467246 TOX2Q96NM4 488 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 ERVK-6Q9BXR3 956 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 MEAF6Q9HAF1 191 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 S100A14Q9HCY8 104 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 TMEM39AQ9NV64 488 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 INTS10Q9NVR2 710 aaKnown RBP11.4□□□□□ -0.58
HPS1-208ENST00000467246 ETAA1Q9NY74 926 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 LHX3Q9UBR4 397 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 ANGPTL2Q9UKU9 493 aa11.4□□□□□ -0.58
HPS1-208ENST00000467246 ANAPC1Q9H1A4 1944 aa11.4□□□□□ -0.59
HPS1-208ENST00000467246 ATP6AP2A0A1C7CYW4 349 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 SLC22A2O15244 555 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 GPR39O43194 453 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 NDUFS3O75489 264 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 ATP6AP2O75787 350 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 PRAMEF12O95522 483 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 HDCP19113 662 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 ADSLP30566 484 aaPredicted RBP11.39□□□□□ -0.59
HPS1-208ENST00000467246 CSKP41240 450 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 EPHB3P54753 998 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 POLE2P56282 527 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 PTPRNQ16849 979 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 FBXO48Q5FWF7 155 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 NCEH1Q6PIU2 408 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 SNX31Q8N9S9 440 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 BIRC8Q96P09 236 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 SLC30A3Q99726 388 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 DDX50Q9BQ39 737 aaKnown RBP11.39□□□□□ -0.59
HPS1-208ENST00000467246 IL21Q9HBE4 155 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 OR51B4Q9Y5P0 310 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 CPQQ9Y646 472 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 TEX28O15482 410 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 CFLARO15519 480 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 FKBP6O75344 327 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 HOXB8P17481 243 aaPredicted RBP11.39□□□□□ -0.59
HPS1-208ENST00000467246 CES1P23141 567 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 ITGB8P26012 769 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 MC4RP32245 332 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 MSX2P35548 267 aaPredicted RBP11.39□□□□□ -0.59
HPS1-208ENST00000467246 SH3BP2P78314 561 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 NFKB2Q00653 900 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 GALNT1Q10472 559 aaPredicted RBP11.39□□□□□ -0.59
HPS1-208ENST00000467246 GK5Q6ZS86 529 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 CHSY3Q70JA7 882 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 TCEAL8Q8IYN2 117 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 OR6K2Q8NGY2 324 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 HMGCLL1Q8TB92 370 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 FAR2Q96K12 515 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 NSUN5Q96P11 429 aaKnown RBP11.39□□□□□ -0.59
HPS1-208ENST00000467246 ATOH8Q96SQ7 321 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 CDRT15Q96T59 188 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 GPR21Q99679 349 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 NPAS2Q99743 824 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 HERC2P3Q9BVR0 1158 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 ADGRE3Q9BY15 652 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 RC3H2Q9HBD1 1191 aaKnown RBP11.39□□□□□ -0.59
HPS1-208ENST00000467246 POPDC3Q9HBV1 291 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 PAPOLBQ9NRJ5 636 aaKnown RBP11.39□□□□□ -0.59
HPS1-208ENST00000467246 NDE1Q9NXR1 346 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 TAS2R13Q9NYV9 303 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 VPS51Q9UID3 782 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 PCDHB9Q9Y5E1 797 aa11.39□□□□□ -0.59
HPS1-208ENST00000467246 STX16-NPEPL1H3BU86 382 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 168.4 ms