RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 SOX11P35716 441 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 GSK3BP49841 420 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 NFKB2Q00653 900 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 ZNF792Q3KQV3 632 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 TBPL2Q6SJ96 375 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 IFNEQ86WN2 208 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 OR52K2Q8NGK3 314 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 SENP8Q96LD8 212 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 ZFP42Q96MM3 310 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 NSUN5Q96P11 429 aaKnown RBP12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 FUOMA2VDF0 154 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 ASPDHA6ND91 283 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 H0Y858 1186 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 CLASP2O75122 1294 aaKnown RBP12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 MATN4O95460 622 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 S1PR4O95977 384 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 FGF4P08620 206 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 ZNF12P17014 697 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 ARSDP51689 593 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 ADARB1P78563 741 aaKnown RBP12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 GRSF1Q12849 480 aaKnown RBP eCLIP12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 NFATC3Q12968 1075 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 PYCR3Q53H96 274 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 BLOC1S3Q6QNY0 202 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 CENPSQ8N2Z9 138 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 PTGR2Q8N8N7 351 aaPredicted RBP12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 CALML6Q8TD86 181 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 MID1IP1Q9NPA3 183 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 TLR9Q9NR96 1032 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 CORINQ9Y5Q5 1042 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 OAS3Q9Y6K5 1087 aaKnown RBP12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 A0A1B0GTL3 188 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 OR51F1A6NGY5 319 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 J3QRK9 145 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 K7EPI3 171 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 AZIN1O14977 448 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 B4GAT1O43505 415 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 SNAP91O60641 907 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 SERPINB7O75635 380 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 CPNE6O95741 557 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 SMPD1P17405 629 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 HLCSP50747 726 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 SNX17Q15036 470 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 MOGQ16653 247 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 KANK2Q63ZY3 851 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 ZC3H7AQ8IWR0 971 aaKnown RBP12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 TERB1Q8NA31 727 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 PAPD5Q8NDF8 572 aaKnown RBP12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 DDHD1Q8NEL9 900 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 OR13F1Q8NGS4 319 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 DNAJB14Q8TBM8 379 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 RSPH1Q8WYR4 309 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 FBXL8Q96CD0 374 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 SLC30A3Q99726 388 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 C8orf4Q9NR00 106 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 GID8Q9NWU2 228 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 IFT80Q9P2H3 777 aaPredicted RBP12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 POLG2Q9UHN1 485 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 USP22Q9UPT9 525 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 BTRCQ9Y297 605 aa12.97□□□□□ -0.33
PDZRN3-205ENST00000466780 H3BMM5 538 aa12.96□□□□□ -0.33
PDZRN3-205ENST00000466780 SNAI1O95863 264 aaPredicted RBP12.96□□□□□ -0.33
PDZRN3-205ENST00000466780 OCM2P0CE71 109 aa12.96□□□□□ -0.33
PDZRN3-205ENST00000466780 OCMP0CE72 109 aaPredicted RBP12.96□□□□□ -0.33
PDZRN3-205ENST00000466780 FCGR1AP12314 374 aa12.96□□□□□ -0.33
PDZRN3-205ENST00000466780 HOXD8P13378 290 aaPredicted RBP12.96□□□□□ -0.33
PDZRN3-205ENST00000466780 HGFP14210 728 aa12.96□□□□□ -0.33
PDZRN3-205ENST00000466780 CD1DP15813 335 aa12.96□□□□□ -0.33
PDZRN3-205ENST00000466780 AXLP30530 894 aa12.96□□□□□ -0.33
PDZRN3-205ENST00000466780 DIO3P55073 304 aa12.96□□□□□ -0.33
PDZRN3-205ENST00000466780 RAB15P59190 212 aa12.96□□□□□ -0.33
PDZRN3-205ENST00000466780 PHEXP78562 749 aa12.96□□□□□ -0.33
PDZRN3-205ENST00000466780 TIAL1Q01085 375 aaKnown RBP eCLIP12.96□□□□□ -0.33
PDZRN3-205ENST00000466780 IHHQ14623 411 aa12.96□□□□□ -0.33
PDZRN3-205ENST00000466780 MANEALQ5VSG8 457 aa12.96□□□□□ -0.33
PDZRN3-205ENST00000466780 PTRH1Q86Y79 214 aaKnown RBP12.96□□□□□ -0.33
PDZRN3-205ENST00000466780 DCP1BQ8IZD4 617 aaKnown RBP12.96□□□□□ -0.33
PDZRN3-205ENST00000466780 VPS33AQ96AX1 596 aa12.96□□□□□ -0.33
PDZRN3-205ENST00000466780 TUBGCP3Q96CW5 907 aa12.96□□□□□ -0.33
PDZRN3-205ENST00000466780 TEX37Q96LM6 180 aa12.96□□□□□ -0.33
PDZRN3-205ENST00000466780 ALG2Q9H553 416 aa12.96□□□□□ -0.33
PDZRN3-205ENST00000466780 ARNT2Q9HBZ2 717 aa12.96□□□□□ -0.33
PDZRN3-205ENST00000466780 ZNF639Q9UID6 485 aa12.96□□□□□ -0.33
PDZRN3-205ENST00000466780 COL4A4P53420 1690 aaPredicted RBP12.96□□□□□ -0.33
PDZRN3-205ENST00000466780 UBXN8O00124 270 aa12.96□□□□□ -0.34
PDZRN3-205ENST00000466780 PAGE1O75459 146 aa12.96□□□□□ -0.34
PDZRN3-205ENST00000466780 IGLV3-25P01717 112 aa12.96□□□□□ -0.34
PDZRN3-205ENST00000466780 LINC00032P0C843 101 aa12.96□□□□□ -0.34
PDZRN3-205ENST00000466780 MTHFD2P13995 350 aa12.96□□□□□ -0.34
PDZRN3-205ENST00000466780 LBPP18428 481 aa12.96□□□□□ -0.34
PDZRN3-205ENST00000466780 ELK4P28324 431 aa12.96□□□□□ -0.34
PDZRN3-205ENST00000466780 HOXC13P31276 330 aa12.96□□□□□ -0.34
PDZRN3-205ENST00000466780 ZFP36L2P47974 494 aaKnown RBP12.96□□□□□ -0.34
PDZRN3-205ENST00000466780 SERPINH1P50454 418 aaKnown RBP12.96□□□□□ -0.34
PDZRN3-205ENST00000466780 LIPEQ05469 1076 aa12.96□□□□□ -0.34
PDZRN3-205ENST00000466780 FOXM1Q08050 763 aa12.96□□□□□ -0.34
PDZRN3-205ENST00000466780 TRAF2Q12933 501 aa12.96□□□□□ -0.34
PDZRN3-205ENST00000466780 EIF4EBP2Q13542 120 aaPredicted RBP12.96□□□□□ -0.34
PDZRN3-205ENST00000466780 OR4D1Q15615 310 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms