RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 IRF1P10914 325 aa4.81□□□□□ -1.64
SMC4-205ENST00000465563 FBXO47Q5MNV8 452 aa4.81□□□□□ -1.64
SMC4-205ENST00000465563 ZC2HC1BQ5TFG8 222 aa4.81□□□□□ -1.64
SMC4-205ENST00000465563 SFMBT2Q5VUG0 894 aa4.81□□□□□ -1.64
SMC4-205ENST00000465563 ZNF497Q6ZNH5 498 aa4.81□□□□□ -1.64
SMC4-205ENST00000465563 CCT6BQ92526 530 aa4.81□□□□□ -1.64
SMC4-205ENST00000465563 PIGTQ969N2 578 aa4.81□□□□□ -1.64
SMC4-205ENST00000465563 TBC1D20Q96BZ9 403 aa4.81□□□□□ -1.64
SMC4-205ENST00000465563 ZNF354BQ96LW1 612 aa4.81□□□□□ -1.64
SMC4-205ENST00000465563 PYM1Q9BRP8 204 aaKnown RBP4.81□□□□□ -1.64
SMC4-205ENST00000465563 EFNA5P52803 228 aa4.8□□□□□ -1.64
SMC4-205ENST00000465563 SLC1A5Q15758 541 aa4.8□□□□□ -1.64
SMC4-205ENST00000465563 ZNF766Q5HY98 468 aa4.8□□□□□ -1.64
SMC4-205ENST00000465563 MAP3K21Q5TCX8 1036 aa4.8□□□□□ -1.64
SMC4-205ENST00000465563 TXNDC8Q6A555 127 aa4.8□□□□□ -1.64
SMC4-205ENST00000465563 TTI2Q6NXR4 508 aa4.8□□□□□ -1.64
SMC4-205ENST00000465563 ATF7IPQ6VMQ6 1270 aa4.8□□□□□ -1.64
SMC4-205ENST00000465563 SRBD1Q8N5C6 995 aaKnown RBP4.8□□□□□ -1.64
SMC4-205ENST00000465563 SCRN2Q96FV2 425 aa4.8□□□□□ -1.64
SMC4-205ENST00000465563 NEURL2Q9BR09 285 aa4.8□□□□□ -1.64
SMC4-205ENST00000465563 FSD1Q9BTV5 496 aa4.8□□□□□ -1.64
SMC4-205ENST00000465563 HEMGNQ9BXL5 484 aa4.8□□□□□ -1.64
SMC4-205ENST00000465563 UPF2Q9HAU5 1272 aaKnown RBP4.8□□□□□ -1.64
SMC4-205ENST00000465563 ITM2CQ9NQX7 267 aa4.8□□□□□ -1.64
SMC4-205ENST00000465563 C20orf141Q9NUB4 165 aa4.8□□□□□ -1.64
SMC4-205ENST00000465563 MAP3K20Q9NYL2 800 aaKnown RBP4.8□□□□□ -1.64
SMC4-205ENST00000465563 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.8□□□□□ -1.64
SMC4-205ENST00000465563 ERVK-11Q9UQG0 969 aa4.8□□□□□ -1.64
SMC4-205ENST00000465563 IGLV5-45A0A087WSX0 123 aa4.79□□□□□ -1.64
SMC4-205ENST00000465563 GUCY1B2O75343 617 aa4.79□□□□□ -1.64
SMC4-205ENST00000465563 IGHV4-39P01824 125 aa4.79□□□□□ -1.64
SMC4-205ENST00000465563 CDH15P55291 814 aa4.79□□□□□ -1.64
SMC4-205ENST00000465563 SORDQ00796 357 aa4.79□□□□□ -1.64
SMC4-205ENST00000465563 FOXD4Q12950 439 aaPredicted RBP4.79□□□□□ -1.64
SMC4-205ENST00000465563 RNPS1Q15287 305 aaKnown RBP4.79□□□□□ -1.64
SMC4-205ENST00000465563 TMEM35AQ53FP2 167 aa4.79□□□□□ -1.64
SMC4-205ENST00000465563 ATG16L1Q676U5 607 aa4.79□□□□□ -1.64
SMC4-205ENST00000465563 DUS1LQ6P1R4 473 aaKnown RBP4.79□□□□□ -1.64
SMC4-205ENST00000465563 FAM171BQ6P995 826 aa4.79□□□□□ -1.64
SMC4-205ENST00000465563 MAPK1IP1LQ8NDC0 245 aa4.79□□□□□ -1.64
SMC4-205ENST00000465563 TM9SF4Q92544 642 aa4.79□□□□□ -1.64
SMC4-205ENST00000465563 QRFPRQ96P65 431 aa4.79□□□□□ -1.64
SMC4-205ENST00000465563 PCYT2Q99447 389 aa4.79□□□□□ -1.64
SMC4-205ENST00000465563 HSPB7Q9UBY9 170 aa4.79□□□□□ -1.64
SMC4-205ENST00000465563 CNOT7Q9UIV1 285 aaKnown RBP4.79□□□□□ -1.64
SMC4-205ENST00000465563 SMAD5-AS1Q9Y6J3 95 aa4.79□□□□□ -1.64
SMC4-205ENST00000465563 SMIM1B2RUZ4 78 aa4.78□□□□□ -1.64
SMC4-205ENST00000465563 ZNHIT1O43257 154 aa4.78□□□□□ -1.64
SMC4-205ENST00000465563 NR1D1P20393 614 aa4.78□□□□□ -1.64
SMC4-205ENST00000465563 DCTP40126 519 aa4.78□□□□□ -1.64
SMC4-205ENST00000465563 NFIL3Q16649 462 aa4.78□□□□□ -1.64
SMC4-205ENST00000465563 BBS12Q6ZW61 710 aa4.78□□□□□ -1.64
SMC4-205ENST00000465563 PCDH20Q8N6Y1 951 aaKnown RBP4.78□□□□□ -1.64
SMC4-205ENST00000465563 STAMBPL1Q96FJ0 436 aa4.78□□□□□ -1.64
SMC4-205ENST00000465563 FAM110AQ9BQ89 295 aa4.78□□□□□ -1.64
SMC4-205ENST00000465563 INTS2Q9H0H0 1204 aaKnown RBP4.78□□□□□ -1.64
SMC4-205ENST00000465563 TTYH1Q9H313 450 aaPredicted RBP4.78□□□□□ -1.64
SMC4-205ENST00000465563 PLEKHA4Q9H4M7 779 aa4.78□□□□□ -1.64
SMC4-205ENST00000465563 HCN3Q9P1Z3 774 aa4.78□□□□□ -1.64
SMC4-205ENST00000465563 PTPRCP08575 1304 aa4.77□□□□□ -1.65
SMC4-205ENST00000465563 CTAGE9A4FU28 777 aa4.77□□□□□ -1.65
SMC4-205ENST00000465563 SYNGR3O43761 229 aa4.77□□□□□ -1.65
SMC4-205ENST00000465563 CTAGE8P0CG41 777 aa4.77□□□□□ -1.65
SMC4-205ENST00000465563 CHRNB4P30926 498 aa4.77□□□□□ -1.65
SMC4-205ENST00000465563 PGM1P36871 562 aa4.77□□□□□ -1.65
SMC4-205ENST00000465563 CSNK2A1P68400 391 aaPredicted RBP4.77□□□□□ -1.65
SMC4-205ENST00000465563 FOXM1Q08050 763 aa4.77□□□□□ -1.65
SMC4-205ENST00000465563 NAE1Q13564 534 aa4.77□□□□□ -1.65
SMC4-205ENST00000465563 TDGQ13569 410 aa4.77□□□□□ -1.65
SMC4-205ENST00000465563 BRAT1Q6PJG6 821 aa4.77□□□□□ -1.65
SMC4-205ENST00000465563 SLC22A25Q6T423 547 aa4.77□□□□□ -1.65
SMC4-205ENST00000465563 RRM2BQ7LG56 351 aa4.77□□□□□ -1.65
SMC4-205ENST00000465563 SLC46A3Q7Z3Q1 461 aa4.77□□□□□ -1.65
SMC4-205ENST00000465563 CTAGE4Q8IX94 777 aa4.77□□□□□ -1.65
SMC4-205ENST00000465563 STPG4Q8N801 248 aa4.77□□□□□ -1.65
SMC4-205ENST00000465563 CSNK2A3Q8NEV1 391 aa4.77□□□□□ -1.65
SMC4-205ENST00000465563 SLC41A2Q96JW4 573 aa4.77□□□□□ -1.65
SMC4-205ENST00000465563 ZNF599Q96NL3 588 aa4.77□□□□□ -1.65
SMC4-205ENST00000465563 H2AFJQ9BTM1 129 aa4.77□□□□□ -1.65
SMC4-205ENST00000465563 TFB2MQ9H5Q4 396 aaKnown RBP4.77□□□□□ -1.65
SMC4-205ENST00000465563 ZNF624Q9P2J8 865 aaPredicted RBP4.77□□□□□ -1.65
SMC4-205ENST00000465563 POLG2Q9UHN1 485 aa4.77□□□□□ -1.65
SMC4-205ENST00000465563 GAGE10A6NGK3 116 aa4.76□□□□□ -1.65
SMC4-205ENST00000465563 TAF4O00268 1085 aa4.76□□□□□ -1.65
SMC4-205ENST00000465563 SEC14L5O43304 696 aa4.76□□□□□ -1.65
SMC4-205ENST00000465563 PRKNO60260 465 aaPredicted RBP4.76□□□□□ -1.65
SMC4-205ENST00000465563 CAVIN2O95810 425 aa4.76□□□□□ -1.65
SMC4-205ENST00000465563 POLR2CP19387 275 aaPredicted RBP4.76□□□□□ -1.65
SMC4-205ENST00000465563 GABRB2P47870 512 aa4.76□□□□□ -1.65
SMC4-205ENST00000465563 TRAPPC10P48553 1259 aa4.76□□□□□ -1.65
SMC4-205ENST00000465563 AMPHP49418 695 aa4.76□□□□□ -1.65
SMC4-205ENST00000465563 HIST2H2BDQ6DRA6 164 aa4.76□□□□□ -1.65
SMC4-205ENST00000465563 OR7E24Q6IFN5 339 aa4.76□□□□□ -1.65
SMC4-205ENST00000465563 LRRC8DQ7L1W4 858 aa4.76□□□□□ -1.65
SMC4-205ENST00000465563 HCAR2Q8TDS4 363 aa4.76□□□□□ -1.65
SMC4-205ENST00000465563 ORAI1Q96D31 301 aa4.76□□□□□ -1.65
SMC4-205ENST00000465563 LINGO1Q96FE5 620 aa4.76□□□□□ -1.65
SMC4-205ENST00000465563 TKTL2Q9H0I9 626 aa4.76□□□□□ -1.65
SMC4-205ENST00000465563 HSF4Q9ULV5 492 aa4.76□□□□□ -1.65
SMC4-205ENST00000465563 CCDC194A0A1B0GVG4 234 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms