RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 KCNH5Q8NCM2 988 aa5.9□□□□□ -1.46
PTCD3-205ENST00000464541 RND1Q92730 232 aa5.9□□□□□ -1.46
PTCD3-205ENST00000464541 ARHGEF2Q92974 986 aaKnown RBP5.9□□□□□ -1.46
PTCD3-205ENST00000464541 RRNAD1Q96FB5 475 aaKnown RBP5.9□□□□□ -1.46
PTCD3-205ENST00000464541 ACOX2Q99424 681 aa5.9□□□□□ -1.46
PTCD3-205ENST00000464541 PCGF1Q9BSM1 259 aa5.9□□□□□ -1.46
PTCD3-205ENST00000464541 MUC13Q9H3R2 512 aa5.9□□□□□ -1.46
PTCD3-205ENST00000464541 ZNF556Q9HAH1 456 aa5.9□□□□□ -1.46
PTCD3-205ENST00000464541 MALT1Q9UDY8 824 aa5.9□□□□□ -1.46
PTCD3-205ENST00000464541 SAA2-SAA4A0A096LPE2 208 aa5.89□□□□□ -1.47
PTCD3-205ENST00000464541 VCYO14598 125 aa5.89□□□□□ -1.47
PTCD3-205ENST00000464541 NDUFS3O75489 264 aa5.89□□□□□ -1.47
PTCD3-205ENST00000464541 DAB1O75553 588 aa5.89□□□□□ -1.47
PTCD3-205ENST00000464541 EIF2S1P05198 315 aaKnown RBP5.89□□□□□ -1.47
PTCD3-205ENST00000464541 UBA1P22314 1058 aaKnown RBP5.89□□□□□ -1.47
PTCD3-205ENST00000464541 MCM3P25205 808 aa5.89□□□□□ -1.47
PTCD3-205ENST00000464541 PBX3P40426 434 aa5.89□□□□□ -1.47
PTCD3-205ENST00000464541 F2RL1P55085 397 aa5.89□□□□□ -1.47
PTCD3-205ENST00000464541 EEF1A2Q05639 463 aaKnown RBP5.89□□□□□ -1.47
PTCD3-205ENST00000464541 FOXM1Q08050 763 aa5.89□□□□□ -1.47
PTCD3-205ENST00000464541 WBP2NLQ6ICG8 309 aa5.89□□□□□ -1.47
PTCD3-205ENST00000464541 TRNP1Q6NT89 227 aa5.89□□□□□ -1.47
PTCD3-205ENST00000464541 CYP20A1Q6UW02 462 aa5.89□□□□□ -1.47
PTCD3-205ENST00000464541 UNQ6126/PRO20091Q6UXV3 157 aa5.89□□□□□ -1.47
PTCD3-205ENST00000464541 EXOC3L1Q86VI1 746 aa5.89□□□□□ -1.47
PTCD3-205ENST00000464541 RNF168Q8IYW5 571 aaPredicted RBP5.89□□□□□ -1.47
PTCD3-205ENST00000464541 NAGSQ8N159 534 aa5.89□□□□□ -1.47
PTCD3-205ENST00000464541 SPATA22Q8NHS9 363 aa5.89□□□□□ -1.47
PTCD3-205ENST00000464541 IGSF8Q969P0 613 aa5.89□□□□□ -1.47
PTCD3-205ENST00000464541 PERPQ96FX8 193 aa5.89□□□□□ -1.47
PTCD3-205ENST00000464541 PPP1R13BQ96KQ4 1090 aa5.89□□□□□ -1.47
PTCD3-205ENST00000464541 IL17FQ96PD4 163 aa5.89□□□□□ -1.47
PTCD3-205ENST00000464541 ACSL5Q9ULC5 683 aa5.89□□□□□ -1.47
PTCD3-205ENST00000464541 PROCRQ9UNN8 238 aa5.89□□□□□ -1.47
PTCD3-205ENST00000464541 AMDHD2Q9Y303 409 aa5.89□□□□□ -1.47
PTCD3-205ENST00000464541 ITIH6Q6UXX5 1313 aa5.89□□□□□ -1.47
PTCD3-205ENST00000464541 IGHV4OR15-8A0A075B7B6 117 aa5.88□□□□□ -1.47
PTCD3-205ENST00000464541 SCAMP1O15126 338 aa5.88□□□□□ -1.47
PTCD3-205ENST00000464541 HCRTR2O43614 444 aa5.88□□□□□ -1.47
PTCD3-205ENST00000464541 JRKO75564 520 aa5.88□□□□□ -1.47
PTCD3-205ENST00000464541 NKX2-2O95096 273 aa5.88□□□□□ -1.47
PTCD3-205ENST00000464541 TFAP4Q01664 338 aa5.88□□□□□ -1.47
PTCD3-205ENST00000464541 RGMBQ6NW40 437 aa5.88□□□□□ -1.47
PTCD3-205ENST00000464541 SARM1Q6SZW1 724 aa5.88□□□□□ -1.47
PTCD3-205ENST00000464541 MAATS1Q7Z4T9 603 aa5.88□□□□□ -1.47
PTCD3-205ENST00000464541 PXKQ7Z7A4 578 aa5.88□□□□□ -1.47
PTCD3-205ENST00000464541 HACE1Q8IYU2 909 aa5.88□□□□□ -1.47
PTCD3-205ENST00000464541 KCNG4Q8TDN1 519 aa5.88□□□□□ -1.47
PTCD3-205ENST00000464541 POMGNT1Q8WZA1 660 aa5.88□□□□□ -1.47
PTCD3-205ENST00000464541 FIG4Q92562 907 aa5.88□□□□□ -1.47
PTCD3-205ENST00000464541 TMEM19Q96HH6 336 aa5.88□□□□□ -1.47
PTCD3-205ENST00000464541 SEPT5Q99719 369 aaPredicted RBP5.88□□□□□ -1.47
PTCD3-205ENST00000464541 CHMP4AQ9BY43 222 aa5.88□□□□□ -1.47
PTCD3-205ENST00000464541 UBTD1Q9HAC8 227 aa5.88□□□□□ -1.47
PTCD3-205ENST00000464541 ACSS1Q9NUB1 689 aaPredicted RBP5.88□□□□□ -1.47
PTCD3-205ENST00000464541 ADAM18Q9Y3Q7 739 aa5.88□□□□□ -1.47
PTCD3-205ENST00000464541 LOXL2Q9Y4K0 774 aa5.88□□□□□ -1.47
PTCD3-205ENST00000464541 PSAT1Q9Y617 370 aa5.88□□□□□ -1.47
PTCD3-205ENST00000464541 FAM237BA0A1B0GVD1 139 aa5.87□□□□□ -1.47
PTCD3-205ENST00000464541 LIPT2A6NK58 231 aa5.87□□□□□ -1.47
PTCD3-205ENST00000464541 HNRNPCL2B2RXH8 293 aa5.87□□□□□ -1.47
PTCD3-205ENST00000464541 CLGNO14967 610 aa5.87□□□□□ -1.47
PTCD3-205ENST00000464541 SPINT2O43291 252 aa5.87□□□□□ -1.47
PTCD3-205ENST00000464541 KRT36O76013 467 aa5.87□□□□□ -1.47
PTCD3-205ENST00000464541 BAIAP3O94812 1187 aa5.87□□□□□ -1.47
PTCD3-205ENST00000464541 ARL3P36405 182 aa5.87□□□□□ -1.47
PTCD3-205ENST00000464541 USP8P40818 1118 aa5.87□□□□□ -1.47
PTCD3-205ENST00000464541 BRWD1-AS2P59051 145 aa5.87□□□□□ -1.47
PTCD3-205ENST00000464541 ERVFC1-1P60608 527 aa5.87□□□□□ -1.47
PTCD3-205ENST00000464541 TROAPQ12815 778 aa5.87□□□□□ -1.47
PTCD3-205ENST00000464541 KCNT1Q5JUK3 1230 aa5.87□□□□□ -1.47
PTCD3-205ENST00000464541 DCST1Q5T197 706 aa5.87□□□□□ -1.47
PTCD3-205ENST00000464541 DUS1LQ6P1R4 473 aaKnown RBP5.87□□□□□ -1.47
PTCD3-205ENST00000464541 TUBA1AQ71U36 451 aa5.87□□□□□ -1.47
PTCD3-205ENST00000464541 SFR1Q86XK3 245 aa5.87□□□□□ -1.47
PTCD3-205ENST00000464541 CCDC13Q8IYE1 715 aa5.87□□□□□ -1.47
PTCD3-205ENST00000464541 NGEFQ8N5V2 710 aa5.87□□□□□ -1.47
PTCD3-205ENST00000464541 RFLNBQ8N5W9 214 aa5.87□□□□□ -1.47
PTCD3-205ENST00000464541 PCDH20Q8N6Y1 951 aaKnown RBP5.87□□□□□ -1.47
PTCD3-205ENST00000464541 LNX1Q8TBB1 728 aaPredicted RBP5.87□□□□□ -1.47
PTCD3-205ENST00000464541 TAAR8Q969N4 342 aa5.87□□□□□ -1.47
PTCD3-205ENST00000464541 TUBA1CQ9BQE3 449 aa5.87□□□□□ -1.47
PTCD3-205ENST00000464541 PDZD7Q9H5P4 517 aa5.87□□□□□ -1.47
PTCD3-205ENST00000464541 MAGIXQ9H6Y5 334 aa5.87□□□□□ -1.47
PTCD3-205ENST00000464541 RANGRFQ9HD47 186 aaPredicted RBP5.87□□□□□ -1.47
PTCD3-205ENST00000464541 CNOT8Q9UFF9 292 aaKnown RBP5.87□□□□□ -1.47
PTCD3-205ENST00000464541 KCNG2Q9UJ96 466 aa5.87□□□□□ -1.47
PTCD3-205ENST00000464541 MTMR6Q9Y217 621 aa5.87□□□□□ -1.47
PTCD3-205ENST00000464541 PIAS3Q9Y6X2 628 aa5.87□□□□□ -1.47
PTCD3-205ENST00000464541 CGNL1Q0VF96 1302 aa5.86□□□□□ -1.47
PTCD3-205ENST00000464541 PGPEP1LA6NFU8 196 aa5.86□□□□□ -1.47
PTCD3-205ENST00000464541 LILRA5A6NI73 299 aa5.86□□□□□ -1.47
PTCD3-205ENST00000464541 PRR23D1E9PI22 279 aaPredicted RBP5.86□□□□□ -1.47
PTCD3-205ENST00000464541 RNASEH2AO75792 299 aaKnown RBP5.86□□□□□ -1.47
PTCD3-205ENST00000464541 MLYCDO95822 493 aa5.86□□□□□ -1.47
PTCD3-205ENST00000464541 EGFP01133 1207 aa5.86□□□□□ -1.47
PTCD3-205ENST00000464541 AFPP02771 609 aaKnown RBP5.86□□□□□ -1.47
PTCD3-205ENST00000464541 PRR23D2P0DMB1 279 aaPredicted RBP5.86□□□□□ -1.47
PTCD3-205ENST00000464541 IL7RP16871 459 aa5.86□□□□□ -1.47
PTCD3-205ENST00000464541 S1PR1P21453 382 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms