RNA–Protein interactions for RNA: ENST00000464451.5

SEC61A1-203, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-203ENST00000464451 TMCO4Q5TGY1 634 aa12.11□□□□□ -0.47
SEC61A1-203ENST00000464451 TRIM68Q6AZZ1 485 aa12.11□□□□□ -0.47
SEC61A1-203ENST00000464451 AAGABQ6PD74 315 aa12.11□□□□□ -0.47
SEC61A1-203ENST00000464451 FRMD7Q6ZUT3 714 aa12.11□□□□□ -0.47
SEC61A1-203ENST00000464451 PGBD5Q8N414 524 aa12.11□□□□□ -0.47
SEC61A1-203ENST00000464451 SPATA6LQ8N4H0 392 aa12.11□□□□□ -0.47
SEC61A1-203ENST00000464451 CPSF7Q8N684 471 aaKnown RBP12.11□□□□□ -0.47
SEC61A1-203ENST00000464451 SCG3Q8WXD2 468 aaKnown RBP12.11□□□□□ -0.47
SEC61A1-203ENST00000464451 SMARCD2Q92925 531 aa12.11□□□□□ -0.47
SEC61A1-203ENST00000464451 PEX13Q92968 403 aa12.11□□□□□ -0.47
SEC61A1-203ENST00000464451 RSPRY1Q96DX4 576 aa12.11□□□□□ -0.47
SEC61A1-203ENST00000464451 MOCOSQ96EN8 888 aa12.11□□□□□ -0.47
SEC61A1-203ENST00000464451 CEP295NLQ96MC4 621 aa12.11□□□□□ -0.47
SEC61A1-203ENST00000464451 ASB16Q96NS5 453 aa12.11□□□□□ -0.47
SEC61A1-203ENST00000464451 CDK5RAP1Q96SZ6 601 aaKnown RBP12.11□□□□□ -0.47
SEC61A1-203ENST00000464451 CXorf56Q9H5V9 222 aa12.11□□□□□ -0.47
SEC61A1-203ENST00000464451 WDR55Q9H6Y2 383 aaPredicted RBP12.11□□□□□ -0.47
SEC61A1-203ENST00000464451 CCSER2Q9H7U1 834 aa12.11□□□□□ -0.47
SEC61A1-203ENST00000464451 CCL26Q9Y258 94 aa12.11□□□□□ -0.47
SEC61A1-203ENST00000464451 GOLGA8QA0A0J9YX86 632 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 RGSL1A5PLK6 1076 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 GOLGA8OA6NCC3 632 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 GOLGA8NF8WBI6 632 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 NARSO43776 548 aaKnown RBP12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 TLR5O60602 858 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 PRAMEF11O60813 436 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 EPOP01588 193 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 CKMP06732 381 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 RBP1P09455 135 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 LTA4HP09960 611 aaKnown RBP12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 ATXN1LP0C7T5 689 aaKnown RBP12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 ANPEPP15144 967 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 HDCP19113 662 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 ITGAXP20702 1163 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 FCARP24071 287 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 EPHA3P29320 983 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 CCR10P46092 362 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 PRAMEP78395 509 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 CUL3Q13618 768 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 CSHL1Q14406 222 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 IHHQ14623 411 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 RBM20Q5T481 1227 aaKnown RBP12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 TRIM67Q6ZTA4 783 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 PTAR1Q7Z6K3 402 aaPredicted RBP12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 SETD3Q86TU7 594 aaPredicted RBP12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 DEFB107AQ8IZN7 70 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 CMTM8Q8IZV2 173 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 SLC44A3Q8N4M1 653 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 CCNYL1Q8N7R7 359 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 TXNDC5Q8NBS9 432 aaKnown RBP12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 OR6P1Q8NGX9 317 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 IFT43Q96FT9 208 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 FEM1CQ96JP0 617 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 ZNF599Q96NL3 588 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 LENG8Q96PV6 779 aaPredicted RBP12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 NDNQ99608 321 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 OLFM1Q99784 485 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 NUF2Q9BZD4 464 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 SHCBP1LQ9BZQ2 653 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 RNF38Q9H0F5 515 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 RETREG1Q9H6L5 497 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 ACSS2Q9NR19 701 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 SMPD4Q9NXE4 827 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 VWA7Q9Y334 891 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 ZFP37Q9Y6Q3 630 aaPredicted RBP12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 TRPC5OSA6NMA1 111 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 ANHXE9PGG2 379 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 F5H5T6 163 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 NEMP1O14524 444 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 SCAMP3O14828 347 aaKnown RBP12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 MAP3K7O43318 606 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 LDB2O43679 373 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 FGF1P05230 155 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 HLA-DPA1P20036 260 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 TACR2P21452 398 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 PPARGP37231 505 aaPredicted RBP12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 ETFBP38117 255 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 SLC26A3P40879 764 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 ZNF235Q14590 738 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 ACAP2Q15057 778 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 ZNF789Q5FWF6 425 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 TECRLQ5HYJ1 363 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 HECTD2Q5U5R9 776 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 NADSYN1Q6IA69 706 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 CIR1Q86X95 450 aaPredicted RBP12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 RP9Q8TA86 221 aaKnown RBP12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 JADE3Q92613 823 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 HDAC10Q969S8 669 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 FAR2Q96K12 515 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 UBXN10Q96LJ8 280 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 LRRC3BQ96PB8 259 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 SEMA3CQ99985 751 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 EML4Q9HC35 981 aaKnown RBP12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 ZFP14Q9HCL3 533 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 NDE1Q9NXR1 346 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 WASF2Q9Y6W5 498 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 DOCK8Q8NF50 2099 aa12.1□□□□□ -0.47
SEC61A1-203ENST00000464451 OBSL1O75147 1896 aa12.09□□□□□ -0.47
SEC61A1-203ENST00000464451 TRAV19A0A0A6YYK7 116 aa12.09□□□□□ -0.47
SEC61A1-203ENST00000464451 S1PR4O95977 384 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms