RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 KCNJ11Q14654 390 aa18.87■□□□□ 0.61
LMNB1-204ENST00000463908 SHBQ15464 509 aa18.87■□□□□ 0.61
LMNB1-204ENST00000463908 TAF1AQ15573 450 aaPredicted RBP18.87■□□□□ 0.61
LMNB1-204ENST00000463908 AASDHQ4L235 1098 aaPredicted RBP18.87■□□□□ 0.61
LMNB1-204ENST00000463908 ANKRD22Q5VYY1 191 aa18.87■□□□□ 0.61
LMNB1-204ENST00000463908 ZNF572Q7Z3I7 529 aaPredicted RBP18.87■□□□□ 0.61
LMNB1-204ENST00000463908 GLT6D1Q7Z4J2 308 aa18.87■□□□□ 0.61
LMNB1-204ENST00000463908 DCP2Q8IU60 420 aaKnown RBP18.87■□□□□ 0.61
LMNB1-204ENST00000463908 MINDY1Q8N5J2 469 aa18.87■□□□□ 0.61
LMNB1-204ENST00000463908 CPT1BQ92523 772 aa18.87■□□□□ 0.61
LMNB1-204ENST00000463908 EDEM2Q9BV94 578 aa18.87■□□□□ 0.61
LMNB1-204ENST00000463908 GAREM1Q9H706 876 aa18.87■□□□□ 0.61
LMNB1-204ENST00000463908 ERVMER34-1Q9H9K5 563 aa18.87■□□□□ 0.61
LMNB1-204ENST00000463908 EIF2B3Q9NR50 452 aaKnown RBP18.87■□□□□ 0.61
LMNB1-204ENST00000463908 ADAMTS9Q9P2N4 1935 aa18.87■□□□□ 0.61
LMNB1-204ENST00000463908 PNMA8BQ9ULN7 279 aaPredicted RBP18.87■□□□□ 0.61
LMNB1-204ENST00000463908 NCOR2Q9Y618 2525 aa18.87■□□□□ 0.61
LMNB1-204ENST00000463908 CACNA1BQ00975 2339 aa18.86■□□□□ 0.61
LMNB1-204ENST00000463908 TOR1BO14657 336 aa18.86■□□□□ 0.61
LMNB1-204ENST00000463908 GAS8O95995 478 aa18.86■□□□□ 0.61
LMNB1-204ENST00000463908 HOXC4P09017 264 aaPredicted RBP18.86■□□□□ 0.61
LMNB1-204ENST00000463908 CDH17Q12864 832 aa18.86■□□□□ 0.61
LMNB1-204ENST00000463908 PDE1CQ14123 709 aaPredicted RBP18.86■□□□□ 0.61
LMNB1-204ENST00000463908 CERCAMQ5T4B2 595 aa18.86■□□□□ 0.61
LMNB1-204ENST00000463908 HENMT1Q5T8I9 393 aaKnown RBP18.86■□□□□ 0.61
LMNB1-204ENST00000463908 IL27RAQ6UWB1 636 aa18.86■□□□□ 0.61
LMNB1-204ENST00000463908 LRRC45Q96CN5 670 aa18.86■□□□□ 0.61
LMNB1-204ENST00000463908 KRT12Q99456 494 aa18.86■□□□□ 0.61
LMNB1-204ENST00000463908 TEX101Q9BY14 249 aa18.86■□□□□ 0.61
LMNB1-204ENST00000463908 GDF3Q9NR23 364 aa18.86■□□□□ 0.61
LMNB1-204ENST00000463908 KLF15Q9UIH9 416 aa18.86■□□□□ 0.61
LMNB1-204ENST00000463908 CNOT6Q9ULM6 557 aaKnown RBP18.86■□□□□ 0.61
LMNB1-204ENST00000463908 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.85■□□□□ 0.61
LMNB1-204ENST00000463908 C4orf47A7E2U8 309 aa18.85■□□□□ 0.61
LMNB1-204ENST00000463908 FADS2P1A8MWK0 482 aa18.85■□□□□ 0.61
LMNB1-204ENST00000463908 TSHRP16473 764 aa18.85■□□□□ 0.61
LMNB1-204ENST00000463908 TPSB2P20231 275 aa18.85■□□□□ 0.61
LMNB1-204ENST00000463908 LPOP22079 712 aaPredicted RBP18.85■□□□□ 0.61
LMNB1-204ENST00000463908 TEAD1P28347 426 aa18.85■□□□□ 0.61
LMNB1-204ENST00000463908 GPR1P46091 355 aa18.85■□□□□ 0.61
LMNB1-204ENST00000463908 MRPS25P82663 173 aaKnown RBP18.85■□□□□ 0.61
LMNB1-204ENST00000463908 DR1Q01658 176 aa18.85■□□□□ 0.61
LMNB1-204ENST00000463908 EIF2B5Q13144 721 aaKnown RBP18.85■□□□□ 0.61
LMNB1-204ENST00000463908 PTK6Q13882 451 aa18.85■□□□□ 0.61
LMNB1-204ENST00000463908 PPP1R7Q15435 360 aa18.85■□□□□ 0.61
LMNB1-204ENST00000463908 TPSAB1Q15661 275 aa18.85■□□□□ 0.61
LMNB1-204ENST00000463908 ZNF542PQ5EBM4 170 aa18.85■□□□□ 0.61
LMNB1-204ENST00000463908 ALS2CLQ60I27 953 aa18.85■□□□□ 0.61
LMNB1-204ENST00000463908 KCTD16Q68DU8 428 aa18.85■□□□□ 0.61
LMNB1-204ENST00000463908 PPP1R21Q6ZMI0 780 aa18.85■□□□□ 0.61
LMNB1-204ENST00000463908 ZNF534Q76KX8 674 aa18.85■□□□□ 0.61
LMNB1-204ENST00000463908 RUNDC3BQ96NL0 473 aa18.85■□□□□ 0.61
LMNB1-204ENST00000463908 ELF4Q99607 663 aaPredicted RBP18.85■□□□□ 0.61
LMNB1-204ENST00000463908 IL26Q9NPH9 171 aa18.85■□□□□ 0.61
LMNB1-204ENST00000463908 TMEM9BQ9NQ34 198 aa18.85■□□□□ 0.61
LMNB1-204ENST00000463908 DNAAF2Q9NVR5 837 aaKnown RBP18.85■□□□□ 0.61
LMNB1-204ENST00000463908 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.85■□□□□ 0.61
LMNB1-204ENST00000463908 NFKBIL1Q9UBC1 381 aaPredicted RBP18.85■□□□□ 0.61
LMNB1-204ENST00000463908 FNDC3AQ9Y2H6 1198 aaKnown RBP18.85■□□□□ 0.61
LMNB1-204ENST00000463908 A0A1B0GTQ1 180 aa18.84■□□□□ 0.61
LMNB1-204ENST00000463908 MED19A0JLT2 244 aaPredicted RBP18.84■□□□□ 0.61
LMNB1-204ENST00000463908 TMEM202A6NGA9 273 aa18.84■□□□□ 0.61
LMNB1-204ENST00000463908 TTI1O43156 1089 aa18.84■□□□□ 0.61
LMNB1-204ENST00000463908 RXRGP48443 463 aa18.84■□□□□ 0.61
LMNB1-204ENST00000463908 ATXN3P54252 364 aaPredicted RBP18.84■□□□□ 0.61
LMNB1-204ENST00000463908 DCDC1P59894 354 aa18.84■□□□□ 0.61
LMNB1-204ENST00000463908 CDK3Q00526 305 aa18.84■□□□□ 0.61
LMNB1-204ENST00000463908 CDK16Q00536 496 aa18.84■□□□□ 0.61
LMNB1-204ENST00000463908 C2orf54Q08AI8 447 aa18.84■□□□□ 0.61
LMNB1-204ENST00000463908 POU6F1Q14863 301 aa18.84■□□□□ 0.61
LMNB1-204ENST00000463908 NFATC4Q14934 902 aa18.84■□□□□ 0.61
LMNB1-204ENST00000463908 STPG1Q5TH74 334 aa18.84■□□□□ 0.61
LMNB1-204ENST00000463908 RAET1GQ6H3X3 334 aa18.84■□□□□ 0.61
LMNB1-204ENST00000463908 ADAMTSL4Q6UY14 1074 aa18.84■□□□□ 0.61
LMNB1-204ENST00000463908 HEATR4Q86WZ0 1026 aa18.84■□□□□ 0.61
LMNB1-204ENST00000463908 JAMLQ86YT9 394 aa18.84■□□□□ 0.61
LMNB1-204ENST00000463908 DNAAF3Q8N9W5 541 aa18.84■□□□□ 0.61
LMNB1-204ENST00000463908 OR4K2Q8NGD2 314 aa18.84■□□□□ 0.61
LMNB1-204ENST00000463908 RAD18Q9NS91 495 aa18.84■□□□□ 0.61
LMNB1-204ENST00000463908 TMPRSS11EQ9UL52 423 aa18.84■□□□□ 0.61
LMNB1-204ENST00000463908 LAMA1P25391 3075 aa18.84■□□□□ 0.61
LMNB1-204ENST00000463908 MROH6A6NGR9 719 aa18.83■□□□□ 0.6
LMNB1-204ENST00000463908 C2orf81A6NN90 581 aa18.83■□□□□ 0.6
LMNB1-204ENST00000463908 GAPDHSO14556 408 aaPredicted RBP18.83■□□□□ 0.6
LMNB1-204ENST00000463908 STX7O15400 261 aaKnown RBP18.83■□□□□ 0.6
LMNB1-204ENST00000463908 TMEM63AO94886 807 aa18.83■□□□□ 0.6
LMNB1-204ENST00000463908 CRTAMO95727 393 aa18.83■□□□□ 0.6
LMNB1-204ENST00000463908 FUCA1P04066 466 aa18.83■□□□□ 0.6
LMNB1-204ENST00000463908 CA5AP35218 305 aa18.83■□□□□ 0.6
LMNB1-204ENST00000463908 ADCY8P40145 1251 aa18.83■□□□□ 0.6
LMNB1-204ENST00000463908 ZNF140P52738 457 aaPredicted RBP18.83■□□□□ 0.6
LMNB1-204ENST00000463908 THOP1P52888 689 aa18.83■□□□□ 0.6
LMNB1-204ENST00000463908 KIAA1024LP59773 190 aa18.83■□□□□ 0.6
LMNB1-204ENST00000463908 BNIP3Q12983 259 aa18.83■□□□□ 0.6
LMNB1-204ENST00000463908 PTK2BQ14289 1009 aa18.83■□□□□ 0.6
LMNB1-204ENST00000463908 CCDC38Q502W7 563 aa18.83■□□□□ 0.6
LMNB1-204ENST00000463908 LRRC8BQ6P9F7 803 aa18.83■□□□□ 0.6
LMNB1-204ENST00000463908 ENPP7Q6UWV6 458 aa18.83■□□□□ 0.6
LMNB1-204ENST00000463908 MACC1Q6ZN28 852 aa18.83■□□□□ 0.6
LMNB1-204ENST00000463908 SYDE1Q6ZW31 735 aaPredicted RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms