RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 SMU1Q2TAY7 513 aa5.81□□□□□ -1.48
COPS3-205ENST00000463097 CERKLQ49MI3 558 aaPredicted RBP5.81□□□□□ -1.48
COPS3-205ENST00000463097 ENTPD8Q5MY95 495 aa5.81□□□□□ -1.48
COPS3-205ENST00000463097 TUBA3EQ6PEY2 450 aa5.81□□□□□ -1.48
COPS3-205ENST00000463097 DPPA4Q7L190 304 aa5.81□□□□□ -1.48
COPS3-205ENST00000463097 SDCCAG8Q86SQ7 713 aaPredicted RBP5.81□□□□□ -1.48
COPS3-205ENST00000463097 LDB1Q86U70 411 aaPredicted RBP5.81□□□□□ -1.48
COPS3-205ENST00000463097 ADIPOR2Q86V24 386 aa5.81□□□□□ -1.48
COPS3-205ENST00000463097 ADGRF4Q8IZF3 695 aa5.81□□□□□ -1.48
COPS3-205ENST00000463097 SLC25A41Q8N5S1 370 aa5.81□□□□□ -1.48
COPS3-205ENST00000463097 ZNF398Q8TD17 642 aa5.81□□□□□ -1.48
COPS3-205ENST00000463097 BCAS4Q8TDM0 211 aa5.81□□□□□ -1.48
COPS3-205ENST00000463097 SLC9A6Q92581 669 aa5.81□□□□□ -1.48
COPS3-205ENST00000463097 KRT35Q92764 455 aa5.81□□□□□ -1.48
COPS3-205ENST00000463097 EXOC4Q96A65 974 aa5.81□□□□□ -1.48
COPS3-205ENST00000463097 VCPIP1Q96JH7 1222 aa5.81□□□□□ -1.48
COPS3-205ENST00000463097 CABS1Q96KC9 395 aa5.81□□□□□ -1.48
COPS3-205ENST00000463097 C8orf49Q96NF6 230 aa5.81□□□□□ -1.48
COPS3-205ENST00000463097 PCGF1Q9BSM1 259 aa5.81□□□□□ -1.48
COPS3-205ENST00000463097 BDH2Q9BUT1 245 aa5.81□□□□□ -1.48
COPS3-205ENST00000463097 ZNF341Q9BYN7 854 aa5.81□□□□□ -1.48
COPS3-205ENST00000463097 DNAJC18Q9H819 358 aa5.81□□□□□ -1.48
COPS3-205ENST00000463097 PIH1D3Q9NQM4 214 aaKnown RBP5.81□□□□□ -1.48
COPS3-205ENST00000463097 IL17BQ9UHF5 180 aa5.81□□□□□ -1.48
COPS3-205ENST00000463097 NFE2L3Q9Y4A8 694 aa5.81□□□□□ -1.48
COPS3-205ENST00000463097 ZCCHC6Q5VYS8 1495 aaKnown RBP5.81□□□□□ -1.48
COPS3-205ENST00000463097 COL4A3Q01955 1670 aa5.8□□□□□ -1.48
COPS3-205ENST00000463097 TMEM202A6NGA9 273 aa5.8□□□□□ -1.48
COPS3-205ENST00000463097 WIPF3A6NGB9 483 aa5.8□□□□□ -1.48
COPS3-205ENST00000463097 CCDC188H7C350 402 aa5.8□□□□□ -1.48
COPS3-205ENST00000463097 RNF8O76064 485 aa5.8□□□□□ -1.48
COPS3-205ENST00000463097 CELF2O95319 508 aaKnown RBP5.8□□□□□ -1.48
COPS3-205ENST00000463097 SIX3O95343 332 aaPredicted RBP5.8□□□□□ -1.48
COPS3-205ENST00000463097 PTMAP06454 111 aaKnown RBP5.8□□□□□ -1.48
COPS3-205ENST00000463097 HLA-DPA1P20036 260 aa5.8□□□□□ -1.48
COPS3-205ENST00000463097 CASTP20810 708 aaKnown RBP5.8□□□□□ -1.48
COPS3-205ENST00000463097 CDH13P55290 713 aa5.8□□□□□ -1.48
COPS3-205ENST00000463097 TUBB4BP68371 445 aa5.8□□□□□ -1.48
COPS3-205ENST00000463097 SIRPAP78324 504 aa5.8□□□□□ -1.48
COPS3-205ENST00000463097 MEP1BQ16820 701 aa5.8□□□□□ -1.48
COPS3-205ENST00000463097 PNLIPRP3Q17RR3 467 aa5.8□□□□□ -1.48
COPS3-205ENST00000463097 TTC39AQ5SRH9 613 aa5.8□□□□□ -1.48
COPS3-205ENST00000463097 TMEM211Q6ICI0 200 aa5.8□□□□□ -1.48
COPS3-205ENST00000463097 PPP1R21Q6ZMI0 780 aa5.8□□□□□ -1.48
COPS3-205ENST00000463097 PQLC2Q6ZP29 291 aa5.8□□□□□ -1.48
COPS3-205ENST00000463097 LINC00696Q6ZRV3 163 aa5.8□□□□□ -1.48
COPS3-205ENST00000463097 HAUS6Q7Z4H7 955 aa5.8□□□□□ -1.48
COPS3-205ENST00000463097 SPATA19Q7Z5L4 167 aa5.8□□□□□ -1.48
COPS3-205ENST00000463097 CENPVQ7Z7K6 275 aaPredicted RBP5.8□□□□□ -1.48
COPS3-205ENST00000463097 CHSY1Q86X52 802 aa5.8□□□□□ -1.48
COPS3-205ENST00000463097 TUSC5Q8IXB3 177 aa5.8□□□□□ -1.48
COPS3-205ENST00000463097 LRRC57Q8N9N7 239 aa5.8□□□□□ -1.48
COPS3-205ENST00000463097 CORO2AQ92828 525 aa5.8□□□□□ -1.48
COPS3-205ENST00000463097 OTULINQ96BN8 352 aa5.8□□□□□ -1.48
COPS3-205ENST00000463097 ERO1AQ96HE7 468 aa5.8□□□□□ -1.48
COPS3-205ENST00000463097 PI4K2AQ9BTU6 479 aa5.8□□□□□ -1.48
COPS3-205ENST00000463097 SCNM1Q9BWG6 230 aa5.8□□□□□ -1.48
COPS3-205ENST00000463097 PIGMQ9H3S5 423 aa5.8□□□□□ -1.48
COPS3-205ENST00000463097 ANKZF1Q9H8Y5 726 aa5.8□□□□□ -1.48
COPS3-205ENST00000463097 EPB41L5Q9HCM4 733 aa5.8□□□□□ -1.48
COPS3-205ENST00000463097 GPR108Q9NPR9 543 aa5.8□□□□□ -1.48
COPS3-205ENST00000463097 LARSQ9P2J5 1176 aaKnown RBP5.8□□□□□ -1.48
COPS3-205ENST00000463097 UBA2Q9UBT2 640 aaPredicted RBP5.8□□□□□ -1.48
COPS3-205ENST00000463097 ADAM21Q9UKJ8 722 aa5.8□□□□□ -1.48
COPS3-205ENST00000463097 UTS2RQ9UKP6 389 aa5.8□□□□□ -1.48
COPS3-205ENST00000463097 LIPT1Q9Y234 373 aa5.8□□□□□ -1.48
COPS3-205ENST00000463097 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.8□□□□□ -1.48
COPS3-205ENST00000463097 IGSF1Q8N6C5 1336 aa5.79□□□□□ -1.48
COPS3-205ENST00000463097 CPED1A4D0V7 1026 aa5.79□□□□□ -1.48
COPS3-205ENST00000463097 CGB1A6NKQ9 187 aa5.79□□□□□ -1.48
COPS3-205ENST00000463097 ANXA2P2A6NMY6 339 aa5.79□□□□□ -1.48
COPS3-205ENST00000463097 ENO4A6NNW6 628 aa5.79□□□□□ -1.48
COPS3-205ENST00000463097 K7ESM1 405 aa5.79□□□□□ -1.48
COPS3-205ENST00000463097 DDX39AO00148 427 aaKnown RBP5.79□□□□□ -1.48
COPS3-205ENST00000463097 VCYO14598 125 aa5.79□□□□□ -1.48
COPS3-205ENST00000463097 SMAD9O15198 467 aaKnown RBP5.79□□□□□ -1.48
COPS3-205ENST00000463097 PAX4O43316 350 aa5.79□□□□□ -1.48
COPS3-205ENST00000463097 SLC22A3O75751 556 aa5.79□□□□□ -1.48
COPS3-205ENST00000463097 RGS11O94810 467 aa5.79□□□□□ -1.48
COPS3-205ENST00000463097 CAMTA2O94983 1202 aa5.79□□□□□ -1.48
COPS3-205ENST00000463097 MMP3P08254 477 aa5.79□□□□□ -1.48
COPS3-205ENST00000463097 SNRNP70P08621 437 aaKnown RBP5.79□□□□□ -1.48
COPS3-205ENST00000463097 SUPT20HL2P0C7V6 817 aa5.79□□□□□ -1.48
COPS3-205ENST00000463097 CYP2A6P11509 494 aaPredicted RBP5.79□□□□□ -1.48
COPS3-205ENST00000463097 SRCP12931 536 aa5.79□□□□□ -1.48
COPS3-205ENST00000463097 PFKFB1P16118 471 aa5.79□□□□□ -1.48
COPS3-205ENST00000463097 DNASE1P24855 282 aa5.79□□□□□ -1.48
COPS3-205ENST00000463097 HSPA4P34932 840 aa5.79□□□□□ -1.48
COPS3-205ENST00000463097 PRKCIP41743 596 aa5.79□□□□□ -1.48
COPS3-205ENST00000463097 RARRES1P49788 294 aa5.79□□□□□ -1.48
COPS3-205ENST00000463097 SOX10P56693 466 aa5.79□□□□□ -1.48
COPS3-205ENST00000463097 SIM1P81133 766 aaPredicted RBP5.79□□□□□ -1.48
COPS3-205ENST00000463097 KRT33BQ14525 404 aa5.79□□□□□ -1.48
COPS3-205ENST00000463097 LPIN1Q14693 890 aa5.79□□□□□ -1.48
COPS3-205ENST00000463097 C2orf76Q3KRA6 126 aa5.79□□□□□ -1.48
COPS3-205ENST00000463097 SUPT20HL1Q3ZLR7 823 aa5.79□□□□□ -1.48
COPS3-205ENST00000463097 EARS2Q5JPH6 523 aaKnown RBP5.79□□□□□ -1.48
COPS3-205ENST00000463097 LCNL1Q6ZST4 164 aa5.79□□□□□ -1.48
COPS3-205ENST00000463097 CEP57Q86XR8 500 aa5.79□□□□□ -1.48
COPS3-205ENST00000463097 MFN1Q8IWA4 741 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms