RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 TIGD5Q53EQ6 642 aa12.42□□□□□ -0.42
HDAC4-208ENST00000463007 IFNL1Q8IU54 200 aa12.42□□□□□ -0.42
HDAC4-208ENST00000463007 AFAP1L2Q8N4X5 818 aa12.42□□□□□ -0.42
HDAC4-208ENST00000463007 GABPB2Q8TAK5 448 aaPredicted RBP12.42□□□□□ -0.42
HDAC4-208ENST00000463007 TFAP2CQ92754 450 aa12.42□□□□□ -0.42
HDAC4-208ENST00000463007 LPPQ93052 612 aa12.42□□□□□ -0.42
HDAC4-208ENST00000463007 CORINQ9Y5Q5 1042 aa12.42□□□□□ -0.42
HDAC4-208ENST00000463007 A0A1B0GTL3 188 aa12.42□□□□□ -0.42
HDAC4-208ENST00000463007 MANSC4A6NHS7 340 aaPredicted RBP12.42□□□□□ -0.42
HDAC4-208ENST00000463007 THP07101 528 aa12.42□□□□□ -0.42
HDAC4-208ENST00000463007 HGFP14210 728 aa12.42□□□□□ -0.42
HDAC4-208ENST00000463007 CAPN3P20807 821 aa12.42□□□□□ -0.42
HDAC4-208ENST00000463007 RPL9P32969 192 aaKnown RBP12.42□□□□□ -0.42
HDAC4-208ENST00000463007 ALDH3B2P48448 385 aa12.42□□□□□ -0.42
HDAC4-208ENST00000463007 TAF1CQ15572 869 aaPredicted RBP12.42□□□□□ -0.42
HDAC4-208ENST00000463007 PCID2Q5JVF3 399 aa12.42□□□□□ -0.42
HDAC4-208ENST00000463007 CAMK1DQ8IU85 385 aa12.42□□□□□ -0.42
HDAC4-208ENST00000463007 BBS5Q8N3I7 341 aa12.42□□□□□ -0.42
HDAC4-208ENST00000463007 IRGQQ8WZA9 623 aa12.42□□□□□ -0.42
HDAC4-208ENST00000463007 EPS8L2Q9H6S3 715 aa12.42□□□□□ -0.42
HDAC4-208ENST00000463007 FANCEQ9HB96 536 aa12.42□□□□□ -0.42
HDAC4-208ENST00000463007 UTP6Q9NYH9 597 aaKnown RBP12.42□□□□□ -0.42
HDAC4-208ENST00000463007 ANKRD6Q9Y2G4 727 aa12.42□□□□□ -0.42
HDAC4-208ENST00000463007 COQ6Q9Y2Z9 468 aa12.42□□□□□ -0.42
HDAC4-208ENST00000463007 PRRC2BQ5JSZ5 2229 aaKnown RBP12.41□□□□□ -0.42
HDAC4-208ENST00000463007 UBA6A0AVT1 1052 aaPredicted RBP12.41□□□□□ -0.42
HDAC4-208ENST00000463007 TARM1B6A8C7 271 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 M0QZQ0 153 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 PIP5K1BO14986 540 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 INPPL1O15357 1258 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 GJB3O75712 270 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 RPL26P61254 145 aaKnown RBP12.41□□□□□ -0.42
HDAC4-208ENST00000463007 CYP2A13Q16696 494 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 BEND5Q7L4P6 421 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 LYSMD3Q7Z3D4 306 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 RBM12BQ8IXT5 1001 aaKnown RBP12.41□□□□□ -0.42
HDAC4-208ENST00000463007 DHRSXQ8N5I4 330 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 C19orf60Q96EN9 201 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 PLEKHA8Q96JA3 519 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 B3GALT6Q96L58 329 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 CIDEBQ9UHD4 219 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 FAM50BQ9Y247 325 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 ST14Q9Y5Y6 855 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 TRIM43BA6NCK2 446 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 UBXN8O00124 270 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 AGRPO00253 132 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 TRIM24O15164 1050 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 ADAMTS4O75173 837 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 PRSS56P0CW18 603 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 BMXP51813 675 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 SH3BP2P78314 561 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 FOXD4Q12950 439 aaPredicted RBP12.41□□□□□ -0.42
HDAC4-208ENST00000463007 MAPRE2Q15555 327 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 MAPK11Q15759 364 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 UGP2Q16851 508 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 ZBED5Q49AG3 693 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 EGFLAMQ63HQ2 1017 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 CCSAPQ6IQ19 270 aaPredicted RBP12.41□□□□□ -0.42
HDAC4-208ENST00000463007 NANOGP8Q6NSW7 305 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 PIWIL3Q7Z3Z3 882 aaKnown RBP12.41□□□□□ -0.42
HDAC4-208ENST00000463007 SLC15A3Q8IY34 581 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 CLEC4FQ8N1N0 589 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 PTGR2Q8N8N7 351 aaPredicted RBP12.41□□□□□ -0.42
HDAC4-208ENST00000463007 PCYOX1LQ8NBM8 494 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 OR10Q1Q8NGQ4 319 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 SCAMP5Q8TAC9 235 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 SMARCD1Q96GM5 515 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 RPF2Q9H7B2 306 aaKnown RBP12.41□□□□□ -0.42
HDAC4-208ENST00000463007 EML4Q9HC35 981 aaKnown RBP12.41□□□□□ -0.42
HDAC4-208ENST00000463007 NT5MQ9NPB1 228 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 TMLHEQ9NVH6 421 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 GMEB1Q9Y692 573 aa12.41□□□□□ -0.42
HDAC4-208ENST00000463007 MAGEB16A2A368 324 aa12.4□□□□□ -0.42
HDAC4-208ENST00000463007 C8BP07358 591 aa12.4□□□□□ -0.42
HDAC4-208ENST00000463007 IL7RP16871 459 aa12.4□□□□□ -0.42
HDAC4-208ENST00000463007 HMOX2P30519 316 aa12.4□□□□□ -0.42
HDAC4-208ENST00000463007 HOXC13P31276 330 aa12.4□□□□□ -0.42
HDAC4-208ENST00000463007 GGT5P36269 586 aa12.4□□□□□ -0.42
HDAC4-208ENST00000463007 SCNN1GP51170 649 aa12.4□□□□□ -0.42
HDAC4-208ENST00000463007 NFYCQ13952 458 aa12.4□□□□□ -0.42
HDAC4-208ENST00000463007 AGAP9Q5VTM2 703 aa12.4□□□□□ -0.42
HDAC4-208ENST00000463007 BTLAQ7Z6A9 289 aa12.4□□□□□ -0.42
HDAC4-208ENST00000463007 SAPCD2Q86UD0 394 aa12.4□□□□□ -0.42
HDAC4-208ENST00000463007 CENPSQ8N2Z9 138 aa12.4□□□□□ -0.42
HDAC4-208ENST00000463007 SLC15A4Q8N697 577 aa12.4□□□□□ -0.42
HDAC4-208ENST00000463007 NPLQ9BXD5 320 aaPredicted RBP12.4□□□□□ -0.42
HDAC4-208ENST00000463007 ANKRD60Q9BZ19 345 aa12.4□□□□□ -0.42
HDAC4-208ENST00000463007 MAP10Q9P2G4 905 aa12.4□□□□□ -0.42
HDAC4-208ENST00000463007 BLOC1S6Q9UL45 172 aa12.4□□□□□ -0.42
HDAC4-208ENST00000463007 FAM155AB1AL88 458 aaPredicted RBP12.4□□□□□ -0.42
HDAC4-208ENST00000463007 NCAM2O15394 837 aa12.4□□□□□ -0.42
HDAC4-208ENST00000463007 RSL1D1O76021 490 aaKnown RBP12.4□□□□□ -0.42
HDAC4-208ENST00000463007 FUCA1P04066 466 aa12.4□□□□□ -0.42
HDAC4-208ENST00000463007 POLR2IP36954 125 aaKnown RBP12.4□□□□□ -0.42
HDAC4-208ENST00000463007 ZNF135P52742 658 aaPredicted RBP12.4□□□□□ -0.42
HDAC4-208ENST00000463007 HUNKP57058 714 aa12.4□□□□□ -0.42
HDAC4-208ENST00000463007 YWHAHQ04917 246 aaPredicted RBP12.4□□□□□ -0.42
HDAC4-208ENST00000463007 INPP5AQ14642 412 aa12.4□□□□□ -0.42
HDAC4-208ENST00000463007 TGFBIQ15582 683 aa12.4□□□□□ -0.42
HDAC4-208ENST00000463007 TIGD2Q4W5G0 525 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms