RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 TRIM8Q9BZR9 551 aa15.48■□□□□ 0.07
SSR4-206ENST00000460616 MRM3Q9HC36 420 aaKnown RBP15.48■□□□□ 0.07
SSR4-206ENST00000460616 TLR9Q9NR96 1032 aa15.48■□□□□ 0.07
SSR4-206ENST00000460616 ZNF639Q9UID6 485 aa15.48■□□□□ 0.07
SSR4-206ENST00000460616 GJD2Q9UKL4 321 aa15.48■□□□□ 0.07
SSR4-206ENST00000460616 C16orf96A6NNT2 1141 aa15.47■□□□□ 0.07
SSR4-206ENST00000460616 TOR1BO14657 336 aa15.47■□□□□ 0.07
SSR4-206ENST00000460616 FARP2O94887 1054 aaPredicted RBP15.47■□□□□ 0.07
SSR4-206ENST00000460616 IQCF3P0C7M6 154 aa15.47■□□□□ 0.07
SSR4-206ENST00000460616 NFKB1P19838 968 aa15.47■□□□□ 0.07
SSR4-206ENST00000460616 CAPN3P20807 821 aa15.47■□□□□ 0.07
SSR4-206ENST00000460616 UBA1P22314 1058 aaKnown RBP15.47■□□□□ 0.07
SSR4-206ENST00000460616 NOS2P35228 1153 aa15.47■□□□□ 0.07
SSR4-206ENST00000460616 MATKP42679 507 aa15.47■□□□□ 0.07
SSR4-206ENST00000460616 HNRNPFP52597 415 aaKnown RBP15.47■□□□□ 0.07
SSR4-206ENST00000460616 TPTEP56180 551 aa15.47■□□□□ 0.07
SSR4-206ENST00000460616 MAP2K5Q13163 448 aa15.47■□□□□ 0.07
SSR4-206ENST00000460616 SLC25A52Q3SY17 297 aa15.47■□□□□ 0.07
SSR4-206ENST00000460616 RBM48Q5RL73 367 aaKnown RBP15.47■□□□□ 0.07
SSR4-206ENST00000460616 DSG4Q86SJ6 1040 aa15.47■□□□□ 0.07
SSR4-206ENST00000460616 SLCO6A1Q86UG4 719 aa15.47■□□□□ 0.07
SSR4-206ENST00000460616 ITIH5Q86UX2 942 aa15.47■□□□□ 0.07
SSR4-206ENST00000460616 DEFB106AQ8N104 65 aa15.47■□□□□ 0.07
SSR4-206ENST00000460616 PAPD5Q8NDF8 572 aaKnown RBP15.47■□□□□ 0.07
SSR4-206ENST00000460616 ZFP90Q8TF47 636 aa15.47■□□□□ 0.07
SSR4-206ENST00000460616 SGCDQ92629 289 aa15.47■□□□□ 0.07
SSR4-206ENST00000460616 VMP1Q96GC9 406 aa15.47■□□□□ 0.07
SSR4-206ENST00000460616 C3orf30Q96M34 536 aa15.47■□□□□ 0.07
SSR4-206ENST00000460616 BDH2Q9BUT1 245 aa15.47■□□□□ 0.07
SSR4-206ENST00000460616 DGCR6LQ9BY27 220 aa15.47■□□□□ 0.07
SSR4-206ENST00000460616 NDEL1Q9GZM8 345 aa15.47■□□□□ 0.07
SSR4-206ENST00000460616 ATP13A3Q9H7F0 1226 aa15.47■□□□□ 0.07
SSR4-206ENST00000460616 AKTIPQ9H8T0 292 aa15.47■□□□□ 0.07
SSR4-206ENST00000460616 PDGFCQ9NRA1 345 aa15.47■□□□□ 0.07
SSR4-206ENST00000460616 FXYD1O00168 92 aa15.46■□□□□ 0.07
SSR4-206ENST00000460616 UBFD1O14562 309 aaKnown RBP15.46■□□□□ 0.07
SSR4-206ENST00000460616 GAS2O43903 313 aaKnown RBP15.46■□□□□ 0.07
SSR4-206ENST00000460616 UGT2B11O75310 529 aa15.46■□□□□ 0.07
SSR4-206ENST00000460616 NCK1P16333 377 aa15.46■□□□□ 0.07
SSR4-206ENST00000460616 PTPN2P17706 415 aa15.46■□□□□ 0.07
SSR4-206ENST00000460616 TCEA1P23193 301 aaKnown RBP15.46■□□□□ 0.07
SSR4-206ENST00000460616 TKTP29401 623 aaKnown RBP15.46■□□□□ 0.07
SSR4-206ENST00000460616 SOX11P35716 441 aa15.46■□□□□ 0.07
SSR4-206ENST00000460616 SP3Q02447 781 aa15.46■□□□□ 0.07
SSR4-206ENST00000460616 MBTD1Q05BQ5 628 aa15.46■□□□□ 0.07
SSR4-206ENST00000460616 SLC16A12Q6ZSM3 486 aa15.46■□□□□ 0.07
SSR4-206ENST00000460616 PDZD4Q76G19 769 aaPredicted RBP15.46■□□□□ 0.07
SSR4-206ENST00000460616 CD99L2Q8TCZ2 262 aa15.46■□□□□ 0.07
SSR4-206ENST00000460616 C19orf60Q96EN9 201 aa15.46■□□□□ 0.07
SSR4-206ENST00000460616 SEPHS2Q99611 448 aa15.46■□□□□ 0.07
SSR4-206ENST00000460616 RMND5AQ9H871 391 aa15.46■□□□□ 0.07
SSR4-206ENST00000460616 CDHR5Q9HBB8 845 aa15.46■□□□□ 0.07
SSR4-206ENST00000460616 TRPV5Q9NQA5 729 aa15.46■□□□□ 0.07
SSR4-206ENST00000460616 IGSF5Q9NSI5 407 aa15.46■□□□□ 0.07
SSR4-206ENST00000460616 IFT52Q9Y366 437 aa15.46■□□□□ 0.07
SSR4-206ENST00000460616 TCRBV5S2A0A599 114 aa15.46■□□□□ 0.07
SSR4-206ENST00000460616 C9JVG2 144 aa15.46■□□□□ 0.07
SSR4-206ENST00000460616 DCLK1O15075 740 aa15.46■□□□□ 0.07
SSR4-206ENST00000460616 MSI1O43347 362 aaKnown RBP15.46■□□□□ 0.07
SSR4-206ENST00000460616 XYLBO75191 536 aa15.46■□□□□ 0.07
SSR4-206ENST00000460616 ARIH2O95376 493 aa15.46■□□□□ 0.07
SSR4-206ENST00000460616 UMPSP11172 480 aa15.46■□□□□ 0.07
SSR4-206ENST00000460616 TSPAN8P19075 237 aa15.46■□□□□ 0.07
SSR4-206ENST00000460616 CHRM3P20309 590 aa15.46■□□□□ 0.07
SSR4-206ENST00000460616 HTR1BP28222 390 aa15.46■□□□□ 0.07
SSR4-206ENST00000460616 GALNT1Q10472 559 aaPredicted RBP15.46■□□□□ 0.07
SSR4-206ENST00000460616 ZNF280DQ6N043 979 aa15.46■□□□□ 0.07
SSR4-206ENST00000460616 TAF2Q6P1X5 1199 aa15.46■□□□□ 0.07
SSR4-206ENST00000460616 PLEKHG7Q6ZR37 379 aa15.46■□□□□ 0.07
SSR4-206ENST00000460616 THAP5Q7Z6K1 395 aa15.46■□□□□ 0.07
SSR4-206ENST00000460616 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.46■□□□□ 0.07
SSR4-206ENST00000460616 SMG8Q8ND04 991 aaKnown RBP15.46■□□□□ 0.07
SSR4-206ENST00000460616 OSCP1Q8WVF1 389 aa15.46■□□□□ 0.07
SSR4-206ENST00000460616 ZMAT2Q96NC0 199 aaKnown RBP15.46■□□□□ 0.07
SSR4-206ENST00000460616 HPS4Q9NQG7 708 aa15.46■□□□□ 0.07
SSR4-206ENST00000460616 TRHDEQ9UKU6 1024 aa15.46■□□□□ 0.07
SSR4-206ENST00000460616 BAG5Q9UL15 447 aa15.46■□□□□ 0.07
SSR4-206ENST00000460616 PCDHGA11Q9Y5H2 935 aa15.46■□□□□ 0.07
SSR4-206ENST00000460616 PCDHA9Q9Y5H5 950 aa15.46■□□□□ 0.07
SSR4-206ENST00000460616 A8MU76 341 aa15.45■□□□□ 0.06
SSR4-206ENST00000460616 AP3B1O00203 1094 aa15.45■□□□□ 0.06
SSR4-206ENST00000460616 ADORA2BP29275 332 aa15.45■□□□□ 0.06
SSR4-206ENST00000460616 SCNN1AP37088 669 aa15.45■□□□□ 0.06
SSR4-206ENST00000460616 UGT3A2Q3SY77 523 aa15.45■□□□□ 0.06
SSR4-206ENST00000460616 TIGD2Q4W5G0 525 aa15.45■□□□□ 0.06
SSR4-206ENST00000460616 TECRLQ5HYJ1 363 aa15.45■□□□□ 0.06
SSR4-206ENST00000460616 NAPEPLDQ6IQ20 393 aa15.45■□□□□ 0.06
SSR4-206ENST00000460616 KIAA0408Q6ZU52 694 aa15.45■□□□□ 0.06
SSR4-206ENST00000460616 CNTN4Q8IWV2 1026 aa15.45■□□□□ 0.06
SSR4-206ENST00000460616 MIER2Q8N344 545 aa15.45■□□□□ 0.06
SSR4-206ENST00000460616 ZCCHC7Q8N3Z6 543 aaKnown RBP15.45■□□□□ 0.06
SSR4-206ENST00000460616 SEPT1Q8WYJ6 367 aa15.45■□□□□ 0.06
SSR4-206ENST00000460616 FAM149B1Q96BN6 582 aa15.45■□□□□ 0.06
SSR4-206ENST00000460616 FAM167AQ96KS9 214 aa15.45■□□□□ 0.06
SSR4-206ENST00000460616 SLC30A3Q99726 388 aa15.45■□□□□ 0.06
SSR4-206ENST00000460616 CHID1Q9BWS9 393 aa15.45■□□□□ 0.06
SSR4-206ENST00000460616 CFHR5Q9BXR6 569 aa15.45■□□□□ 0.06
SSR4-206ENST00000460616 ALG2Q9H553 416 aa15.45■□□□□ 0.06
SSR4-206ENST00000460616 KLQ9UEF7 1012 aa15.45■□□□□ 0.06
SSR4-206ENST00000460616 ENPP5Q9UJA9 477 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms