RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 KCNK9Q9NPC2 374 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 C12orf4Q9NQ89 552 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 C8orf4Q9NR00 106 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 CHRAC1Q9NRG0 131 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 SENP1Q9P0U3 644 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 DNAJC16Q9Y2G8 782 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 NOTCH4Q99466 2003 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 SZT2Q5T011 3432 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 FAM237BA0A1B0GVD1 139 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 EPOPA6NHQ4 379 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 GJB3O75712 270 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 USP1O94782 785 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 ALDH1A2O94788 518 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 OR5F1O95221 314 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 C1QAP02745 245 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 MMP2P08253 660 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 POU2F2P09086 479 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 CREB1P16220 341 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 PRKACAP17612 351 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 MDH1P40925 334 aaKnown RBP10.39□□□□□ -0.75
HERC4-207ENST00000460168 CHRNA4P43681 627 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 ARF5P84085 180 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 SKIV2LQ15477 1246 aaKnown RBP10.39□□□□□ -0.75
HERC4-207ENST00000460168 KDELC1Q6UW63 502 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 CYS1Q717R9 158 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 TMEM135Q86UB9 458 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 TRABD2AQ86V40 505 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 TREML1Q86YW5 311 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 ARID3BQ8IVW6 561 aaPredicted RBP10.39□□□□□ -0.75
HERC4-207ENST00000460168 HCAR2Q8TDS4 363 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 MFSD3Q96ES6 412 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 CERS2Q96G23 380 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 SERINC2Q96SA4 455 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 MGME1Q9BQP7 344 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 HEPHQ9BQS7 1158 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 TRABDQ9H4I3 376 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 IGFLR1Q9H665 355 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 SFXN1Q9H9B4 322 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 SMYD2Q9NRG4 433 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 MOSPD1Q9UJG1 213 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 SOX13Q9UN79 622 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 ACTL7BQ9Y614 415 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 ATG2AQ2TAZ0 1938 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 REV3LO60673 3130 aa10.39□□□□□ -0.75
HERC4-207ENST00000460168 TMEM120BA0PK00 339 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 CCDC78A2IDD5 438 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 FAM159BA6NKW6 160 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 IFRD1O00458 451 aaPredicted RBP10.38□□□□□ -0.75
HERC4-207ENST00000460168 KRT37O76014 449 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 COL6A2P12110 1019 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 CHN1P15882 459 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 M6PRP20645 277 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 PRKAR1BP31321 381 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 SLC1A5Q15758 541 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 SPRED3Q2MJR0 410 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 ANKRD20A4Q4UJ75 823 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 PCID2Q5JVF3 399 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 LGSNQ5TDP6 509 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 ALG1LQ6GMV1 187 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 DENND5AQ6IQ26 1287 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 POTEHQ6S545 545 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.38□□□□□ -0.75
HERC4-207ENST00000460168 FAM9CQ8IZT9 166 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 CCDC63Q8NA47 563 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 DCAF4L2Q8NA75 395 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 PPHLN1Q8NEY8 458 aaKnown RBP10.38□□□□□ -0.75
HERC4-207ENST00000460168 RIN3Q8TB24 985 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 ITFG1Q8TB96 612 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 FNDC8Q8TC99 324 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 FCRL3Q96P31 734 aaPredicted RBP10.38□□□□□ -0.75
HERC4-207ENST00000460168 FARSBQ9NSD9 589 aaKnown RBP10.38□□□□□ -0.75
HERC4-207ENST00000460168 TXNDC16Q9P2K2 825 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 TBC1D14Q9P2M4 693 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 VPS51Q9UID3 782 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 NEDD8-MDP1E9PL57 170 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 RFXAPO00287 272 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 FAM155BO75949 473 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 WFS1O76024 890 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 LMNAP02545 664 aaKnown RBP10.38□□□□□ -0.75
HERC4-207ENST00000460168 ABCB1P08183 1280 aaPredicted RBP10.38□□□□□ -0.75
HERC4-207ENST00000460168 ERVK-10P10266 1014 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 ZNF77Q15935 545 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 TJAP1Q5JTD0 557 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 FYB2Q5VWT5 728 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 SDE2Q6IQ49 451 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 Q6ZNX1 250 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 METTL3Q86U44 580 aaKnown RBP10.38□□□□□ -0.75
HERC4-207ENST00000460168 RASSF3Q86WH2 238 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 RNF135Q8IUD6 432 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 CLVS1Q8IUQ0 354 aaPredicted RBP10.38□□□□□ -0.75
HERC4-207ENST00000460168 SLC38A6Q8IZM9 456 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 C4orf33Q8N1A6 199 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 ANKRD53Q8N9V6 530 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 FIBINQ8TAL6 211 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 CDCA3Q99618 268 aaPredicted RBP10.38□□□□□ -0.75
HERC4-207ENST00000460168 BBS2Q9BXC9 721 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 SCUBE2Q9NQ36 999 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 CLEC4EQ9ULY5 219 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 BPTFQ12830 3046 aa10.38□□□□□ -0.75
HERC4-207ENST00000460168 XIRP2A4UGR9 3374 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms