RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	PARG	Q86W56	976 aa		10.22	□□□□□ -0.77
MRPL55-223	ENST00000459783	NRSN1	Q8IZ57	195 aa		10.22	□□□□□ -0.77
MRPL55-223	ENST00000459783	NDUFAF2	Q8N183	169 aa		10.22	□□□□□ -0.77
MRPL55-223	ENST00000459783	DEFB124	Q8NES8	71 aa		10.22	□□□□□ -0.77
MRPL55-223	ENST00000459783	FAM174A	Q8TBP5	190 aa		10.22	□□□□□ -0.77
MRPL55-223	ENST00000459783	BLOC1S5	Q8TDH9	187 aa		10.22	□□□□□ -0.77
MRPL55-223	ENST00000459783	TSACC	Q96A04	125 aa	Predicted RBP	10.22	□□□□□ -0.77
MRPL55-223	ENST00000459783	MAGOHB	Q96A72	148 aa	Known RBP	10.22	□□□□□ -0.77
MRPL55-223	ENST00000459783	AP2M1	Q96CW1	435 aa		10.22	□□□□□ -0.77
MRPL55-223	ENST00000459783	COX14	Q96I36	57 aa		10.22	□□□□□ -0.77
MRPL55-223	ENST00000459783	FERMT1	Q9BQL6	677 aa		10.22	□□□□□ -0.77
MRPL55-223	ENST00000459783	FSD1L	Q9BXM9	530 aa		10.22	□□□□□ -0.77
MRPL55-223	ENST00000459783	FRMD8	Q9BZ67	464 aa	Predicted RBP	10.22	□□□□□ -0.77
MRPL55-223	ENST00000459783	CLPB	Q9H078	707 aa		10.22	□□□□□ -0.77
MRPL55-223	ENST00000459783	DDX47	Q9H0S4	455 aa	Known RBP	10.22	□□□□□ -0.77
MRPL55-223	ENST00000459783	WDR26	Q9H7D7	661 aa		10.22	□□□□□ -0.77
MRPL55-223	ENST00000459783	MRPL40	Q9NQ50	206 aa	Known RBP	10.22	□□□□□ -0.77
MRPL55-223	ENST00000459783	RAB6B	Q9NRW1	208 aa		10.22	□□□□□ -0.77
MRPL55-223	ENST00000459783	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	10.22	□□□□□ -0.77
MRPL55-223	ENST00000459783	AAR2	Q9Y312	384 aa	Known RBP	10.22	□□□□□ -0.77
MRPL55-223	ENST00000459783	ST14	Q9Y5Y6	855 aa		10.22	□□□□□ -0.77
MRPL55-223	ENST00000459783	OAS3	Q9Y6K5	1087 aa	Known RBP	10.22	□□□□□ -0.77
MRPL55-223	ENST00000459783	SCN8A	Q9UQD0	1980 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	CTAGE9	A4FU28	777 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	CCL22	O00626	93 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	TRIM38	O00635	465 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	INPP4B	O15327	924 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	LDB2	O43679	373 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	MAGEC1	O60732	1142 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	PHF2	O75151	1096 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	PIAS2	O75928	621 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	KRT37	O76014	449 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	SUN1	O94901	812 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	CSF2	P04141	144 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	CEACAM5	P06731	702 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	HOXC4	P09017	264 aa	Predicted RBP	10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	MYCLP1	P12525	358 aa	Predicted RBP	10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	TSHR	P16473	764 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	DGKA	P23743	735 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	NFKBIA	P25963	317 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	MSN	P26038	577 aa	Known RBP	10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	TEAD1	P28347	426 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	HMGCL	P35914	325 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	FDFT1	P37268	417 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	PTGIR	P43119	386 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	POLD2	P49005	469 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	VPS41	P49754	854 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	ZNF140	P52738	457 aa	Predicted RBP	10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	THOP1	P52888	689 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	DCDC1	P59894	354 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	SLC14A1	Q13336	389 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	KHDC1	Q4VXA5	237 aa	Known RBP	10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	ZNF648	Q5T619	568 aa	Predicted RBP	10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	ANKRD22	Q5VYY1	191 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	RAET1G	Q6H3X3	334 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	NLRP8	Q86W28	1048 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	DCP2	Q8IU60	420 aa	Known RBP	10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	NAXD	Q8IW45	347 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	PHACTR4	Q8IZ21	702 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	CCDC89	Q8N998	374 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	OR52K1	Q8NGK4	314 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	OR13C4	Q8NGS5	318 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	SKA1	Q96BD8	255 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	WDR92	Q96MX6	357 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	RTKN	Q9BST9	563 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	LRRC61	Q9BV99	259 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	GPR63	Q9BZJ6	419 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	FAM83D	Q9H4H8	585 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	LRRC40	Q9H9A6	602 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	ARFGAP3	Q9NP61	516 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	IL26	Q9NPH9	171 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	DNAJC28	Q9NX36	388 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	PKD2L2	Q9NZM6	624 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	PAK5	Q9P286	719 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	PCOLCE2	Q9UKZ9	415 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	TMEM98	Q9Y2Y6	226 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	PCDHGB2	Q9Y5G2	931 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	SAR1B	Q9Y6B6	198 aa		10.21	□□□□□ -0.77
MRPL55-223	ENST00000459783	LAMA1	P25391	3075 aa		10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	GOLGA6C	A6NDK9	693 aa		10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	GOLGA6B	A6NDN3	693 aa		10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	TOR1B	O14657	336 aa		10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	LRP4	O75096	1905 aa		10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	TMEM63A	O94886	807 aa		10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	KRT14	P02533	472 aa		10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	GOLGA6D	P0CG33	693 aa		10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	JUND	P17535	347 aa		10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	GPR1	P46091	355 aa		10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	ID4	P47928	161 aa		10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	ARRB1	P49407	418 aa	Predicted RBP	10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	TERF1	P54274	439 aa		10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	SRP54	P61011	504 aa	Known RBP	10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	XIAP	P98170	497 aa		10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	C1orf61	Q13536	156 aa		10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	PUM1	Q14671	1186 aa	Known RBP eCLIP	10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	TCEA2	Q15560	299 aa		10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	TAF1A	Q15573	450 aa	Predicted RBP	10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	MYLK	Q15746	1914 aa		10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	CERCAM	Q5T4B2	595 aa		10.2	□□□□□ -0.78
MRPL55-223	ENST00000459783	CCDC70	Q6NSX1	233 aa		10.2	□□□□□ -0.78

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