RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 LMO7DNF2Z398 122 aa20.67■□□□□ 0.9
VARS-218ENST00000459667 TPP1O14773 563 aa20.67■□□□□ 0.9
VARS-218ENST00000459667 SOD1P00441 154 aa20.67■□□□□ 0.9
VARS-218ENST00000459667 PYGLP06737 847 aa20.67■□□□□ 0.9
VARS-218ENST00000459667 CELA2BP08218 269 aaPredicted RBP20.67■□□□□ 0.9
VARS-218ENST00000459667 ACP1P24666 158 aa20.67■□□□□ 0.9
VARS-218ENST00000459667 TNNT3P45378 269 aaPredicted RBP20.67■□□□□ 0.9
VARS-218ENST00000459667 SPINT3P49223 89 aa20.67■□□□□ 0.9
VARS-218ENST00000459667 TCEA2Q15560 299 aa20.67■□□□□ 0.9
VARS-218ENST00000459667 NLRP8Q86W28 1048 aa20.67■□□□□ 0.9
VARS-218ENST00000459667 FAM181AQ8N9Y4 354 aa20.67■□□□□ 0.9
VARS-218ENST00000459667 RIOK2Q9BVS4 552 aaKnown RBP20.67■□□□□ 0.9
VARS-218ENST00000459667 ZFYVE1Q9HBF4 777 aa20.67■□□□□ 0.9
VARS-218ENST00000459667 MAGEE1Q9HCI5 957 aa20.67■□□□□ 0.9
VARS-218ENST00000459667 EVA1BQ9NVM1 165 aa20.67■□□□□ 0.9
VARS-218ENST00000459667 DOLKQ9UPQ8 538 aa20.67■□□□□ 0.9
VARS-218ENST00000459667 SHOC2Q9UQ13 582 aa20.67■□□□□ 0.9
VARS-218ENST00000459667 ZNF711Q9Y462 761 aa20.67■□□□□ 0.9
VARS-218ENST00000459667 PTPRBP23467 1997 aa20.66■□□□□ 0.9
VARS-218ENST00000459667 PRSS38A1L453 326 aa20.66■□□□□ 0.9
VARS-218ENST00000459667 ZNF189O75820 626 aaPredicted RBP20.66■□□□□ 0.9
VARS-218ENST00000459667 SLC4A1P02730 911 aa20.66■□□□□ 0.9
VARS-218ENST00000459667 CDK4P11802 303 aa20.66■□□□□ 0.9
VARS-218ENST00000459667 CKMT1AP12532 417 aa20.66■□□□□ 0.9
VARS-218ENST00000459667 MPP3Q13368 585 aa20.66■□□□□ 0.9
VARS-218ENST00000459667 ILKQ13418 452 aa20.66■□□□□ 0.9
VARS-218ENST00000459667 ANKRD20A2Q5SQ80 823 aa20.66■□□□□ 0.9
VARS-218ENST00000459667 MEI1Q5TIA1 1274 aa20.66■□□□□ 0.9
VARS-218ENST00000459667 ANKRD20A1Q5TYW2 823 aa20.66■□□□□ 0.9
VARS-218ENST00000459667 ANKRD20A3Q5VUR7 823 aa20.66■□□□□ 0.9
VARS-218ENST00000459667 ADAMTSL4Q6UY14 1074 aa20.66■□□□□ 0.9
VARS-218ENST00000459667 IPMKQ8NFU5 416 aa20.66■□□□□ 0.9
VARS-218ENST00000459667 PDLIM2Q96JY6 352 aa20.66■□□□□ 0.9
VARS-218ENST00000459667 MRGPRX2Q96LB1 330 aa20.66■□□□□ 0.9
VARS-218ENST00000459667 AGAP2Q99490 1192 aa20.66■□□□□ 0.9
VARS-218ENST00000459667 FRMD8Q9BZ67 464 aaPredicted RBP20.66■□□□□ 0.9
VARS-218ENST00000459667 USP29Q9HBJ7 922 aa20.66■□□□□ 0.9
VARS-218ENST00000459667 CYP4F12Q9HCS2 524 aa20.66■□□□□ 0.9
VARS-218ENST00000459667 MSRB2Q9Y3D2 182 aa20.66■□□□□ 0.9
VARS-218ENST00000459667 LY6G6EA0A0G2JKS1 128 aa20.65■□□□□ 0.9
VARS-218ENST00000459667 LOC285095A0A1B0GVY8 99 aa20.65■□□□□ 0.9
VARS-218ENST00000459667 TCRBV7S2A1N4TA0A589 114 aa20.65■□□□□ 0.9
VARS-218ENST00000459667 RGSL1A5PLK6 1076 aa20.65■□□□□ 0.9
VARS-218ENST00000459667 YY2O15391 372 aa20.65■□□□□ 0.9
VARS-218ENST00000459667 ANXA9O76027 345 aa20.65■□□□□ 0.9
VARS-218ENST00000459667 EPOP01588 193 aa20.65■□□□□ 0.9
VARS-218ENST00000459667 MYF5P13349 255 aa20.65■□□□□ 0.9
VARS-218ENST00000459667 DUSP3P51452 185 aaPredicted RBP20.65■□□□□ 0.9
VARS-218ENST00000459667 GEMP55040 296 aa20.65■□□□□ 0.9
VARS-218ENST00000459667 RPS6KA1Q15418 735 aa20.65■□□□□ 0.9
VARS-218ENST00000459667 C6orf132Q5T0Z8 1188 aa20.65■□□□□ 0.9
VARS-218ENST00000459667 TMPRSS7Q7RTY8 843 aa20.65■□□□□ 0.9
VARS-218ENST00000459667 GKN2Q86XP6 184 aa20.65■□□□□ 0.9
VARS-218ENST00000459667 GALNT15Q8N3T1 639 aa20.65■□□□□ 0.9
VARS-218ENST00000459667 SDR16C5Q8N3Y7 309 aa20.65■□□□□ 0.9
VARS-218ENST00000459667 TRIM58Q8NG06 486 aa20.65■□□□□ 0.9
VARS-218ENST00000459667 SCG3Q8WXD2 468 aaKnown RBP20.65■□□□□ 0.9
VARS-218ENST00000459667 EID2BQ96D98 161 aa20.65■□□□□ 0.9
VARS-218ENST00000459667 SPATA13Q96N96 652 aa20.65■□□□□ 0.9
VARS-218ENST00000459667 CNTNAP3BQ96NU0 1288 aa20.65■□□□□ 0.9
VARS-218ENST00000459667 WDR24Q96S15 920 aa20.65■□□□□ 0.9
VARS-218ENST00000459667 SRPK1Q96SB4 655 aaKnown RBP20.65■□□□□ 0.9
VARS-218ENST00000459667 FSD1LQ9BXM9 530 aa20.65■□□□□ 0.9
VARS-218ENST00000459667 CNTNAP3Q9BZ76 1288 aa20.65■□□□□ 0.9
VARS-218ENST00000459667 GPR63Q9BZJ6 419 aa20.65■□□□□ 0.9
VARS-218ENST00000459667 FAM83DQ9H4H8 585 aa20.65■□□□□ 0.9
VARS-218ENST00000459667 CARS2Q9HA77 564 aaKnown RBP20.65■□□□□ 0.9
VARS-218ENST00000459667 NCKIPSDQ9NZQ3 722 aa20.65■□□□□ 0.9
VARS-218ENST00000459667 R3HDM2Q9Y2K5 976 aaKnown RBP20.65■□□□□ 0.9
VARS-218ENST00000459667 SPO11Q9Y5K1 396 aa20.65■□□□□ 0.9
VARS-218ENST00000459667 U3KQA8 63 aa20.65■□□□□ 0.9
VARS-218ENST00000459667 GOLGA4Q13439 2230 aaKnown RBP20.65■□□□□ 0.9
VARS-218ENST00000459667 FAM221BA6H8Z2 402 aa20.64■□□□□ 0.89
VARS-218ENST00000459667 CEACAM5P06731 702 aa20.64■□□□□ 0.89
VARS-218ENST00000459667 PSMB4P28070 264 aa20.64■□□□□ 0.89
VARS-218ENST00000459667 CHRNA4P43681 627 aa20.64■□□□□ 0.89
VARS-218ENST00000459667 SIRPB2Q5JXA9 342 aa20.64■□□□□ 0.89
VARS-218ENST00000459667 HENMT1Q5T8I9 393 aaKnown RBP20.64■□□□□ 0.89
VARS-218ENST00000459667 DOK6Q6PKX4 331 aa20.64■□□□□ 0.89
VARS-218ENST00000459667 TMC3Q7Z5M5 1100 aa20.64■□□□□ 0.89
VARS-218ENST00000459667 SLC25A41Q8N5S1 370 aa20.64■□□□□ 0.89
VARS-218ENST00000459667 CCDC110Q8TBZ0 833 aa20.64■□□□□ 0.89
VARS-218ENST00000459667 GLMNQ92990 594 aa20.64■□□□□ 0.89
VARS-218ENST00000459667 HIC2Q96JB3 615 aa20.64■□□□□ 0.89
VARS-218ENST00000459667 GORASP1Q9BQQ3 440 aa20.64■□□□□ 0.89
VARS-218ENST00000459667 BOCQ9BWV1 1114 aa20.64■□□□□ 0.89
VARS-218ENST00000459667 SUDS3Q9H7L9 328 aaPredicted RBP20.64■□□□□ 0.89
VARS-218ENST00000459667 INPP4BO15327 924 aa20.63■□□□□ 0.89
VARS-218ENST00000459667 ZSCAN12O43309 604 aa20.63■□□□□ 0.89
VARS-218ENST00000459667 HLA-DPA1P20036 260 aa20.63■□□□□ 0.89
VARS-218ENST00000459667 PRPSAP1Q14558 356 aa20.63■□□□□ 0.89
VARS-218ENST00000459667 SLC1A5Q15758 541 aa20.63■□□□□ 0.89
VARS-218ENST00000459667 SMAD1Q15797 465 aaKnown RBP20.63■□□□□ 0.89
VARS-218ENST00000459667 LVRNQ6Q4G3 990 aa20.63■□□□□ 0.89
VARS-218ENST00000459667 TRIM74Q86UV6 250 aa20.63■□□□□ 0.89
VARS-218ENST00000459667 SLC35B2Q8TB61 432 aa20.63■□□□□ 0.89
VARS-218ENST00000459667 TMEM168Q9H0V1 697 aa20.63■□□□□ 0.89
VARS-218ENST00000459667 CARD9Q9H257 536 aa20.63■□□□□ 0.89
VARS-218ENST00000459667 RAD18Q9NS91 495 aa20.63■□□□□ 0.89
VARS-218ENST00000459667 SLC17A4Q9Y2C5 497 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms