RNA–Protein interactions for RNA: ENST00000458709.1

PRAMEF35P-201, Transcript of PRAME family member 35, pseudogene, humanhuman

BASIC

Gene PRAMEF35P, Length 891 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF35P-201ENST00000458709 NR1D2Q14995 579 aa11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 FHL5Q5TD97 284 aa11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 NKAIN2Q5VXU1 208 aa11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 CAPRIN2Q6IMN6 1127 aaKnown RBP11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 C11orf63Q6NUN7 778 aa11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 SLFN11Q7Z7L1 901 aa11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 NLRP14Q86W24 1093 aa11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 FAM129CQ86XR2 697 aa11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 PSTKQ8IV42 348 aaKnown RBP11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 KIAA1524Q8TCG1 905 aa11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 SSC4DQ8WTU2 575 aa11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 PATE1Q8WXA2 126 aa11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 STARD8Q92502 1023 aa11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 NTAN1Q96AB6 310 aa11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 ZNF653Q96CK0 615 aa11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 HMCESQ96FZ2 354 aa11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 HAPLN3Q96S86 360 aa11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 LACRTQ9GZZ8 138 aa11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 SUDS3Q9H7L9 328 aaPredicted RBP11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 CYP4F12Q9HCS2 524 aa11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 PCDH12Q9NPG4 1184 aa11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 PPARGC1AQ9UBK2 798 aaKnown RBP11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 DNAI1Q9UI46 699 aa11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 ANKRD36A6QL64 1941 aa11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 EFCAB7A8K855 629 aa11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 CACNB4O00305 520 aaPredicted RBP11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 SEMA7AO75326 666 aa11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 IGSF6O95976 241 aa11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 CSTF2P33240 577 aaKnown RBP eCLIP11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 MMP12P39900 470 aa11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 LIG3P49916 1009 aa11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 RPL7AP62424 266 aaKnown RBP11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 NRG1Q02297 640 aaPredicted RBP11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 RAD51Q06609 339 aa11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 TRA2AQ13595 282 aaKnown RBP eCLIP11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 SEPT6Q14141 434 aa11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 AGERQ15109 404 aa11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 CLPPQ16740 277 aaPredicted RBP11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 CCDC14Q49A88 953 aa11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 RAB6CQ53S08 254 aa11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 C2CD6Q53TS8 623 aa11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 MANEALQ5VSG8 457 aa11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 LRRC38Q5VT99 294 aa11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 ZNF787Q6DD87 383 aa11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 C16orf46Q6P387 395 aa11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 TIPARPQ7Z3E1 657 aaKnown RBP11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 C17orf82Q86X59 251 aaPredicted RBP11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 ZSWIM9Q86XI8 627 aa11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 NRSN1Q8IZ57 195 aa11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 NLGN4XQ8N0W4 816 aa11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 TEX19Q8NA77 164 aa11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 NLGN4YQ8NFZ3 816 aaPredicted RBP11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 OR4D9Q8NGE8 314 aa11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 SLC35G2Q8TBE7 412 aa11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 ZDHHC1Q8WTX9 485 aa11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 KIAA1143Q96AT1 154 aaPredicted RBP11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 EXOC2Q96KP1 924 aa11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 CFAP57Q96MR6 1250 aa11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 CTRCQ99895 268 aa11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 SELENOOQ9BVL4 669 aa11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 LGR4Q9BXB1 951 aa11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 ASPSCR1Q9BZE9 553 aa11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 RAB6CQ9H0N0 254 aa11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 METTL5Q9NRN9 209 aaKnown RBP11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 MOSPD1Q9UJG1 213 aa11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 HPCAL4Q9UM19 191 aa11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 SRPK3Q9UPE1 567 aa11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 NEU3Q9UQ49 428 aa11.28□□□□□ -0.6
PRAMEF35P-201ENST00000458709 TSPAN11A1L157 253 aa11.27□□□□□ -0.61
PRAMEF35P-201ENST00000458709 PRSS38A1L453 326 aa11.27□□□□□ -0.61
PRAMEF35P-201ENST00000458709 GOLGA6L9A6NEM1 432 aa11.27□□□□□ -0.61
PRAMEF35P-201ENST00000458709 TMCO5BA8MYB1 307 aa11.27□□□□□ -0.61
PRAMEF35P-201ENST00000458709 B4E171 279 aa11.27□□□□□ -0.61
PRAMEF35P-201ENST00000458709 FAM72CH0Y354 149 aa11.27□□□□□ -0.61
PRAMEF35P-201ENST00000458709 BUB1O43683 1085 aa11.27□□□□□ -0.61
PRAMEF35P-201ENST00000458709 RAMP2O60895 175 aa11.27□□□□□ -0.61
PRAMEF35P-201ENST00000458709 VPS4BO75351 444 aa11.27□□□□□ -0.61
PRAMEF35P-201ENST00000458709 PROSCO94903 275 aa11.27□□□□□ -0.61
PRAMEF35P-201ENST00000458709 ECEL1O95672 775 aa11.27□□□□□ -0.61
PRAMEF35P-201ENST00000458709 FGF1P05230 155 aa11.27□□□□□ -0.61
PRAMEF35P-201ENST00000458709 CCNB1P14635 433 aa11.27□□□□□ -0.61
PRAMEF35P-201ENST00000458709 GPD1P21695 349 aa11.27□□□□□ -0.61
PRAMEF35P-201ENST00000458709 COL8A1P27658 744 aa11.27□□□□□ -0.61
PRAMEF35P-201ENST00000458709 SDC4P31431 198 aa11.27□□□□□ -0.61
PRAMEF35P-201ENST00000458709 TSPAN7P41732 249 aa11.27□□□□□ -0.61
PRAMEF35P-201ENST00000458709 SLC1A1P43005 524 aa11.27□□□□□ -0.61
PRAMEF35P-201ENST00000458709 MAPKAPK2P49137 400 aa11.27□□□□□ -0.61
PRAMEF35P-201ENST00000458709 HDAC4P56524 1084 aa11.27□□□□□ -0.61
PRAMEF35P-201ENST00000458709 RHOAP61586 193 aa11.27□□□□□ -0.61
PRAMEF35P-201ENST00000458709 OGDHQ02218 1023 aa11.27□□□□□ -0.61
PRAMEF35P-201ENST00000458709 KIF5AQ12840 1032 aa11.27□□□□□ -0.61
PRAMEF35P-201ENST00000458709 UGP2Q16851 508 aa11.27□□□□□ -0.61
PRAMEF35P-201ENST00000458709 DCAF12Q5T6F0 453 aa11.27□□□□□ -0.61
PRAMEF35P-201ENST00000458709 FAM72AQ5TYM5 149 aa11.27□□□□□ -0.61
PRAMEF35P-201ENST00000458709 FAM72DQ6L9T8 149 aa11.27□□□□□ -0.61
PRAMEF35P-201ENST00000458709 RWDD4Q6NW29 188 aaKnown RBP11.27□□□□□ -0.61
PRAMEF35P-201ENST00000458709 CYP4V2Q6ZWL3 525 aaPredicted RBP11.27□□□□□ -0.61
PRAMEF35P-201ENST00000458709 POLNQ7Z5Q5 900 aa11.27□□□□□ -0.61
PRAMEF35P-201ENST00000458709 FAM72BQ86X60 149 aa11.27□□□□□ -0.61
PRAMEF35P-201ENST00000458709 VSIG1Q86XK7 387 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms