RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 SPAG7O75391 227 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 PIAS1O75925 651 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 PRLP01236 227 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 APOA4P06727 396 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 CYP2A6P11509 494 aaPredicted RBP8.94□□□□□ -0.98
VPS50-207ENST00000458530 TDGF1P13385 188 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 ARSAP15289 507 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 FCARP24071 287 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 PSMA3P25788 255 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 CRABP2P29373 138 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 PMLP29590 882 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 TYK2P29597 1187 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 CRHR1P34998 444 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 SLC1A2P43004 574 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 MAGEA9P43362 315 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 STK19P49842 368 aaPredicted RBP8.94□□□□□ -0.98
VPS50-207ENST00000458530 CCNHP51946 323 aaPredicted RBP8.94□□□□□ -0.98
VPS50-207ENST00000458530 POU4F1Q01851 419 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 MSLNQ13421 630 aaPredicted RBP8.94□□□□□ -0.98
VPS50-207ENST00000458530 RUNX3Q13761 415 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 BMPR2Q13873 1038 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 FASTKD1Q53R41 847 aaKnown RBP8.94□□□□□ -0.98
VPS50-207ENST00000458530 DGKKQ5KSL6 1271 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 VITQ6UXI7 678 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 KYAT3Q6YP21 454 aaKnown RBP8.94□□□□□ -0.98
VPS50-207ENST00000458530 ZC3HC1Q86WB0 502 aaKnown RBP8.94□□□□□ -0.98
VPS50-207ENST00000458530 ETFBKMTQ8IXQ9 262 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 UNC5BQ8IZJ1 945 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 FAM160A2Q8N612 972 aaPredicted RBP8.94□□□□□ -0.98
VPS50-207ENST00000458530 NAT16Q8N8M0 369 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 OR13J1Q8NGT2 312 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 OR4L1Q8NH43 312 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 MGARPQ8TDB4 240 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 HCAR2Q8TDS4 363 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 HDAC10Q969S8 669 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 ISL2Q96A47 359 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 CLDN23Q96B33 292 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 RSPRY1Q96DX4 576 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 CHMP6Q96FZ7 201 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 DNAJC1Q96KC8 554 aaKnown RBP8.94□□□□□ -0.98
VPS50-207ENST00000458530 RPL10LQ96L21 214 aaKnown RBP8.94□□□□□ -0.98
VPS50-207ENST00000458530 MAGEB18Q96M61 343 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 TCF12Q99081 682 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 FAM83CQ9BQN1 747 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 HEPHQ9BQS7 1158 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 TRMT61BQ9BVS5 477 aaKnown RBP8.94□□□□□ -0.98
VPS50-207ENST00000458530 REPIN1Q9BWE0 567 aaKnown RBP8.94□□□□□ -0.98
VPS50-207ENST00000458530 CCDC68Q9H2F9 335 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 TNKS2Q9H2K2 1166 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 EBF3Q9H4W6 596 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 SUV39H2Q9H5I1 410 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 ZDHHC6Q9H6R6 413 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 PRMT8Q9NR22 394 aaPredicted RBP8.94□□□□□ -0.98
VPS50-207ENST00000458530 PCMTD2Q9NV79 361 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 ZSCAN32Q9NX65 697 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 SLC2A6Q9UGQ3 507 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 TLK1Q9UKI8 766 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 GRID1Q9ULK0 1009 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 ARL5AQ9Y689 179 aa8.94□□□□□ -0.98
VPS50-207ENST00000458530 A0A087X1B8 175 aa8.93□□□□□ -0.98
VPS50-207ENST00000458530 A0A0J9YYE9 177 aa8.93□□□□□ -0.98
VPS50-207ENST00000458530 EDDM13A0A1B0GTR0 161 aa8.93□□□□□ -0.98
VPS50-207ENST00000458530 DCDC2BA2VCK2 349 aa8.93□□□□□ -0.98
VPS50-207ENST00000458530 GMNCA6NCL1 334 aa8.93□□□□□ -0.98
VPS50-207ENST00000458530 H7C0S8 307 aa8.93□□□□□ -0.98
VPS50-207ENST00000458530 GOLGA8RI6L899 631 aa8.93□□□□□ -0.98
VPS50-207ENST00000458530 TRAFD1O14545 582 aaPredicted RBP8.93□□□□□ -0.98
VPS50-207ENST00000458530 TPP1O14773 563 aa8.93□□□□□ -0.98
VPS50-207ENST00000458530 SLC30A4O14863 429 aa8.93□□□□□ -0.98
VPS50-207ENST00000458530 NPC1O15118 1278 aa8.93□□□□□ -0.98
VPS50-207ENST00000458530 BNIP3LO60238 219 aa8.93□□□□□ -0.98
VPS50-207ENST00000458530 UGT1A9O60656 530 aa8.93□□□□□ -0.98
VPS50-207ENST00000458530 RFPL1O75677 317 aa8.93□□□□□ -0.98
VPS50-207ENST00000458530 GJB3O75712 270 aa8.93□□□□□ -0.98
VPS50-207ENST00000458530 PIGNO95427 931 aa8.93□□□□□ -0.98
VPS50-207ENST00000458530 TRBC1P01850 177 aa8.93□□□□□ -0.98
VPS50-207ENST00000458530 PRNPP04156 253 aa8.93□□□□□ -0.98
VPS50-207ENST00000458530 APODP05090 189 aa8.93□□□□□ -0.98
VPS50-207ENST00000458530 CISD3P0C7P0 127 aa8.93□□□□□ -0.98
VPS50-207ENST00000458530 NEFHP12036 1026 aa8.93□□□□□ -0.98
VPS50-207ENST00000458530 COL6A2P12110 1019 aa8.93□□□□□ -0.98
VPS50-207ENST00000458530 STMN1P16949 149 aa8.93□□□□□ -0.98
VPS50-207ENST00000458530 ZNF30P17039 623 aa8.93□□□□□ -0.98
VPS50-207ENST00000458530 XPAP23025 273 aaPredicted RBP8.93□□□□□ -0.98
VPS50-207ENST00000458530 ARNTP27540 789 aa8.93□□□□□ -0.98
VPS50-207ENST00000458530 RPA3P35244 121 aaPredicted RBP8.93□□□□□ -0.98
VPS50-207ENST00000458530 HMGCLP35914 325 aa8.93□□□□□ -0.98
VPS50-207ENST00000458530 CTSOP43234 321 aaPredicted RBP8.93□□□□□ -0.98
VPS50-207ENST00000458530 LEPRP48357 1165 aaKnown RBP8.93□□□□□ -0.98
VPS50-207ENST00000458530 TTPAP49638 278 aa8.93□□□□□ -0.98
VPS50-207ENST00000458530 NEK3P51956 506 aa8.93□□□□□ -0.98
VPS50-207ENST00000458530 FZD5Q13467 585 aa8.93□□□□□ -0.98
VPS50-207ENST00000458530 IHHQ14623 411 aa8.93□□□□□ -0.98
VPS50-207ENST00000458530 GEN1Q17RS7 908 aa8.93□□□□□ -0.98
VPS50-207ENST00000458530 TSNAXIP1Q2TAA8 658 aa8.93□□□□□ -0.98
VPS50-207ENST00000458530 ITPRIPL2Q3MIP1 535 aa8.93□□□□□ -0.98
VPS50-207ENST00000458530 CCDC153Q494R4 210 aa8.93□□□□□ -0.98
VPS50-207ENST00000458530 FNDC3BQ53EP0 1204 aaKnown RBP8.93□□□□□ -0.98
VPS50-207ENST00000458530 LYPLAL1Q5VWZ2 237 aa8.93□□□□□ -0.98
VPS50-207ENST00000458530 TRIM68Q6AZZ1 485 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms