RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 IL10P22301 178 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 SLC6A2P23975 617 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 EEF1DP29692 281 aaKnown RBP19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 FMO4P31512 558 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 GRK4P32298 578 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 RAP1GAP2Q684P5 730 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 CXCL17Q6UXB2 119 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 RALGPS2Q86X27 583 aaPredicted RBP19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 ISOC1Q96CN7 298 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 SEMA3CQ99985 751 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 ANKRD60Q9BZ19 345 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 CNOT11Q9UKZ1 510 aaKnown RBP19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 ZNF711Q9Y462 761 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 ZNF236Q9UL36 1845 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 CCDC162PA2VCL2 907 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 CLOCKO15516 846 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 CLASP2O75122 1294 aaKnown RBP19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 SLC2A3P11169 496 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 CD1DP15813 335 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 ALDH3B2P48448 385 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 POLD3Q15054 466 aaPredicted RBP19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 PTPRRQ15256 657 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 TIGD2Q4W5G0 525 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 SLC39A12Q504Y0 691 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 FAM45BPQ6NSW5 357 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 TIGD7Q6NT04 549 aaPredicted RBP19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 PPP4R4Q6NUP7 873 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 XKR5Q6UX68 686 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 ANKRD23Q86SG2 305 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 PGBD5Q8N414 524 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 FAM45AQ8TCE6 357 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 CDK15Q96Q40 435 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 CSNK1G1Q9HCP0 422 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 SARDHQ9UL12 918 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 MAGED1Q9Y5V3 778 aaPredicted RBP19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 M0QZ92 97 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 SNAP29O95721 258 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 FASP25445 335 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 ACVRL1P37023 503 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 PSMD7P51665 324 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 ARPP19P56211 112 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 ESRRGP62508 458 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 MERTKQ12866 999 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 AAK1Q2M2I8 961 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 TMEM26Q6ZUK4 368 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 LRRC58Q96CX6 371 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 ABCC13Q9NSE7 274 aa19.53■□□□□ 0.72
CNEP1R1-203ENST00000458059 A0A1W2PPW3 197 aa19.52■□□□□ 0.72
CNEP1R1-203ENST00000458059 ATE1O95260 518 aa19.52■□□□□ 0.72
CNEP1R1-203ENST00000458059 MMP2P08253 660 aa19.52■□□□□ 0.72
CNEP1R1-203ENST00000458059 EEF1B2P24534 225 aaKnown RBP19.52■□□□□ 0.72
CNEP1R1-203ENST00000458059 YWHAHQ04917 246 aaPredicted RBP19.52■□□□□ 0.72
CNEP1R1-203ENST00000458059 PPP1R8Q12972 351 aaKnown RBP19.52■□□□□ 0.72
CNEP1R1-203ENST00000458059 PMS2P3Q13401 168 aa19.52■□□□□ 0.72
CNEP1R1-203ENST00000458059 PAGE3Q5JUK9 113 aa19.52■□□□□ 0.72
CNEP1R1-203ENST00000458059 ERI1Q8IV48 349 aaKnown RBP19.52■□□□□ 0.72
CNEP1R1-203ENST00000458059 IMP4Q96G21 291 aaKnown RBP19.52■□□□□ 0.72
CNEP1R1-203ENST00000458059 MS4A4AQ96JQ5 239 aa19.52■□□□□ 0.72
CNEP1R1-203ENST00000458059 POLR1BQ9H9Y6 1135 aa19.52■□□□□ 0.72
CNEP1R1-203ENST00000458059 SARS2Q9NP81 518 aaKnown RBP19.52■□□□□ 0.72
CNEP1R1-203ENST00000458059 CCM2LQ9NUG4 571 aaPredicted RBP19.52■□□□□ 0.72
CNEP1R1-203ENST00000458059 FGF10O15520 208 aaPredicted RBP19.52■□□□□ 0.71
CNEP1R1-203ENST00000458059 CD52P31358 61 aa19.52■□□□□ 0.71
CNEP1R1-203ENST00000458059 UFM1P61960 85 aa19.52■□□□□ 0.71
CNEP1R1-203ENST00000458059 TSNQ15631 228 aaKnown RBP19.52■□□□□ 0.71
CNEP1R1-203ENST00000458059 KIAA0408Q6ZU52 694 aa19.52■□□□□ 0.71
CNEP1R1-203ENST00000458059 CFAP52Q8N1V2 620 aa19.52■□□□□ 0.71
CNEP1R1-203ENST00000458059 AP5M1Q9H0R1 490 aa19.52■□□□□ 0.71
CNEP1R1-203ENST00000458059 LTB4R2Q9NPC1 389 aa19.52■□□□□ 0.71
CNEP1R1-203ENST00000458059 TIMMDC1Q9NPL8 285 aa19.52■□□□□ 0.71
CNEP1R1-203ENST00000458059 INTS7Q9NVH2 962 aaKnown RBP19.52■□□□□ 0.71
CNEP1R1-203ENST00000458059 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.52■□□□□ 0.71
CNEP1R1-203ENST00000458059 SLC8A2Q9UPR5 921 aa19.52■□□□□ 0.71
CNEP1R1-203ENST00000458059 CDC7O00311 574 aa19.51■□□□□ 0.71
CNEP1R1-203ENST00000458059 CD3EAPO15446 510 aaKnown RBP19.51■□□□□ 0.71
CNEP1R1-203ENST00000458059 GLP2RO95838 553 aa19.51■□□□□ 0.71
CNEP1R1-203ENST00000458059 PEX11BO96011 259 aa19.51■□□□□ 0.71
CNEP1R1-203ENST00000458059 CD247P20963 164 aa19.51■□□□□ 0.71
CNEP1R1-203ENST00000458059 NR4A1P22736 598 aa19.51■□□□□ 0.71
CNEP1R1-203ENST00000458059 CDKN1CP49918 316 aaPredicted RBP19.51■□□□□ 0.71
CNEP1R1-203ENST00000458059 INPP5AQ14642 412 aa19.51■□□□□ 0.71
CNEP1R1-203ENST00000458059 PYCR3Q53H96 274 aa19.51■□□□□ 0.71
CNEP1R1-203ENST00000458059 TMEM214Q6NUQ4 689 aaKnown RBP19.51■□□□□ 0.71
CNEP1R1-203ENST00000458059 UGT3A1Q6NUS8 523 aa19.51■□□□□ 0.71
CNEP1R1-203ENST00000458059 PAQR3Q6TCH7 311 aa19.51■□□□□ 0.71
CNEP1R1-203ENST00000458059 CAMK1DQ8IU85 385 aa19.51■□□□□ 0.71
CNEP1R1-203ENST00000458059 TTC9BQ8N6N2 239 aa19.51■□□□□ 0.71
CNEP1R1-203ENST00000458059 IGSF8Q969P0 613 aa19.51■□□□□ 0.71
CNEP1R1-203ENST00000458059 GALPQ9UBC7 116 aa19.51■□□□□ 0.71
CNEP1R1-203ENST00000458059 MUSKO15146 869 aa19.51■□□□□ 0.71
CNEP1R1-203ENST00000458059 PSMD8P48556 350 aa19.51■□□□□ 0.71
CNEP1R1-203ENST00000458059 RENBPP51606 427 aa19.51■□□□□ 0.71
CNEP1R1-203ENST00000458059 CLCN2P51788 898 aa19.51■□□□□ 0.71
CNEP1R1-203ENST00000458059 MANEALQ5VSG8 457 aa19.51■□□□□ 0.71
CNEP1R1-203ENST00000458059 PTCD2Q8WV60 388 aaKnown RBP19.51■□□□□ 0.71
CNEP1R1-203ENST00000458059 LDB2O43679 373 aa19.5■□□□□ 0.71
CNEP1R1-203ENST00000458059 MGEA5O60502 916 aa19.5■□□□□ 0.71
CNEP1R1-203ENST00000458059 IGLV3-25P01717 112 aa19.5■□□□□ 0.71
CNEP1R1-203ENST00000458059 MTHFD2P13995 350 aa19.5■□□□□ 0.71
CNEP1R1-203ENST00000458059 POLD2P49005 469 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms