RNA–Protein interactions for RNA: ENST00000456932.6

CSPG4P10-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 10, humanhuman

BASIC

Gene CSPG4P10, Length 4,817 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P10-201ENST00000456932 CDK18Q07002 472 aa11.29□□□□□ -0.6
CSPG4P10-201ENST00000456932 ANKS6Q68DC2 871 aa11.29□□□□□ -0.6
CSPG4P10-201ENST00000456932 RTL3Q8N8U3 475 aaKnown RBP11.29□□□□□ -0.6
CSPG4P10-201ENST00000456932 BDH2Q9BUT1 245 aa11.29□□□□□ -0.6
CSPG4P10-201ENST00000456932 CCDC167Q9P0B6 97 aa11.29□□□□□ -0.6
CSPG4P10-201ENST00000456932 TCAF1Q9Y4C2 921 aa11.29□□□□□ -0.6
CSPG4P10-201ENST00000456932 NT5C1B-RDH14C9J2C7 533 aa11.29□□□□□ -0.6
CSPG4P10-201ENST00000456932 SLC9A3R1O14745 358 aaPredicted RBP11.29□□□□□ -0.6
CSPG4P10-201ENST00000456932 FAM20BO75063 409 aa11.29□□□□□ -0.6
CSPG4P10-201ENST00000456932 CCNKO75909 580 aa11.29□□□□□ -0.6
CSPG4P10-201ENST00000456932 PDE9AO76083 593 aa11.29□□□□□ -0.6
CSPG4P10-201ENST00000456932 KRT6AP02538 564 aa11.29□□□□□ -0.6
CSPG4P10-201ENST00000456932 ALOX5P09917 674 aa11.29□□□□□ -0.6
CSPG4P10-201ENST00000456932 PIRTP0C851 137 aa11.29□□□□□ -0.6
CSPG4P10-201ENST00000456932 COL6A2P12110 1019 aa11.29□□□□□ -0.6
CSPG4P10-201ENST00000456932 MPSTP25325 297 aa11.29□□□□□ -0.6
CSPG4P10-201ENST00000456932 PIK3R1P27986 724 aa11.29□□□□□ -0.6
CSPG4P10-201ENST00000456932 GSSP48637 474 aa11.29□□□□□ -0.6
CSPG4P10-201ENST00000456932 GALNTL6Q49A17 601 aa11.29□□□□□ -0.6
CSPG4P10-201ENST00000456932 SGO1Q5FBB7 561 aa11.29□□□□□ -0.6
CSPG4P10-201ENST00000456932 RETSATQ6NUM9 610 aa11.29□□□□□ -0.6
CSPG4P10-201ENST00000456932 CTU1Q7Z7A3 348 aaKnown RBP11.29□□□□□ -0.6
CSPG4P10-201ENST00000456932 MYO1HQ8N1T3 1032 aa11.29□□□□□ -0.6
CSPG4P10-201ENST00000456932 SVOPQ8N4V2 548 aa11.29□□□□□ -0.6
CSPG4P10-201ENST00000456932 NUAK2Q9H093 628 aa11.29□□□□□ -0.6
CSPG4P10-201ENST00000456932 AGO3Q9H9G7 860 aaKnown RBP11.29□□□□□ -0.6
CSPG4P10-201ENST00000456932 EHD3Q9NZN3 535 aa11.29□□□□□ -0.6
CSPG4P10-201ENST00000456932 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 H7C0S8 307 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 TRAFD1O14545 582 aaPredicted RBP11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 ZBTB11O95625 1053 aaPredicted RBP11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 FBXW4P57775 412 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 MPP1Q00013 466 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 ZNF846Q147U1 533 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 TAB1Q15750 504 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 CAMK1DQ8IU85 385 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 PCDH20Q8N6Y1 951 aaKnown RBP11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 SMG8Q8ND04 991 aaKnown RBP11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 MAGEE2Q8TD90 523 aaPredicted RBP11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 KBTBD7Q8WVZ9 684 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 DLG3Q92796 817 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 ASB2Q96Q27 587 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 GPATCH1Q9BRR8 931 aaKnown RBP11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 PNPLA3Q9NST1 481 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 KLHL3Q9UH77 587 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 CROTQ9UKG9 612 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 LOC100506127A0A0U1RQW1 187 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 MRASO14807 208 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 FGF1P05230 155 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 PITX1P78337 314 aaPredicted RBP11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 PRKCZQ05513 592 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 RALGDSQ12967 914 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 CYP51A1Q16850 503 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 LDLRAP1Q5SW96 308 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 DENND1CQ8IV53 801 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 TMEM40Q8WWA1 233 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 SLC39A8Q9C0K1 460 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 DNAJC28Q9NX36 388 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 SPEF1Q9Y4P9 236 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 RGSL1A5PLK6 1076 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 DUSP4Q13115 394 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 ESRP1Q6NXG1 681 aaKnown RBP11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 AMIGO2Q86SJ2 522 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 OOSP2Q86WS3 158 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 ATG16L2Q8NAA4 619 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 RNF145Q96MT1 663 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 HAPLN3Q96S86 360 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 CADM1Q9BY67 442 aaKnown RBP11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 SLC25A51Q9H1U9 297 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 WDR41Q9HAD4 459 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 A0A0U1RQF3 1178 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 KCNU1A8MYU2 1149 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 BTN3A1O00481 513 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 INHAP05111 366 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 ABCB1P08183 1280 aaPredicted RBP11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 HNRNPLP14866 589 aaKnown RBP eCLIP11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 C1DQ13901 141 aaKnown RBP11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 GALNT3Q14435 633 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 ZNF57Q68EA5 555 aaPredicted RBP11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 AAGABQ6PD74 315 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 PTGR2Q8N8N7 351 aaPredicted RBP11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 OSCP1Q8WVF1 389 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 ZNF570Q96NI8 536 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 HDHD2Q9H0R4 259 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 CLK4Q9HAZ1 481 aaKnown RBP11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 VWA7Q9Y334 891 aa11.28□□□□□ -0.6
CSPG4P10-201ENST00000456932 KLF11O14901 512 aa11.27□□□□□ -0.6
CSPG4P10-201ENST00000456932 FAM189A1O60320 539 aa11.27□□□□□ -0.6
CSPG4P10-201ENST00000456932 SIN3BO75182 1162 aa11.27□□□□□ -0.6
CSPG4P10-201ENST00000456932 SELPP16109 830 aa11.27□□□□□ -0.6
CSPG4P10-201ENST00000456932 TPTEP56180 551 aa11.27□□□□□ -0.6
CSPG4P10-201ENST00000456932 SLC10A2Q12908 348 aaPredicted RBP11.27□□□□□ -0.6
CSPG4P10-201ENST00000456932 DLG2Q15700 870 aa11.27□□□□□ -0.6
CSPG4P10-201ENST00000456932 PFKFB4Q16877 469 aa11.27□□□□□ -0.6
CSPG4P10-201ENST00000456932 VARS2Q5ST30 1063 aaKnown RBP11.27□□□□□ -0.6
CSPG4P10-201ENST00000456932 VWA5B1Q5TIE3 1220 aa11.27□□□□□ -0.6
CSPG4P10-201ENST00000456932 PRMT9Q6P2P2 845 aa11.27□□□□□ -0.6
CSPG4P10-201ENST00000456932 IKBIPQ70UQ0 350 aa11.27□□□□□ -0.6
CSPG4P10-201ENST00000456932 FGD2Q7Z6J4 655 aa11.27□□□□□ -0.6
CSPG4P10-201ENST00000456932 TRIM48Q8IWZ4 208 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms