RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 DDX50Q9BQ39 737 aaKnown RBP4.95□□□□□ -1.62
RIF1-207ENST00000454583 POLR1EQ9GZS1 481 aaKnown RBP4.95□□□□□ -1.62
RIF1-207ENST00000454583 IL22Q9GZX6 179 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 FBRSQ9HAH7 460 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 SLC52A3Q9NQ40 469 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 SENP1Q9P0U3 644 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 UBA2Q9UBT2 640 aaPredicted RBP4.95□□□□□ -1.62
RIF1-207ENST00000454583 PLLPQ9Y342 182 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 ARL5AQ9Y689 179 aa4.95□□□□□ -1.62
RIF1-207ENST00000454583 MDC1Q14676 2089 aaKnown RBP4.95□□□□□ -1.62
RIF1-207ENST00000454583 SERTM1A2A2V5 107 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 PI15O43692 258 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 GPC4O75487 556 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 MATN4O95460 622 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 GAS8O95995 478 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 ADH1CP00326 375 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 AHSGP02765 367 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 FGF1P05230 155 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 PIM1P11309 404 aaPredicted RBP4.94□□□□□ -1.62
RIF1-207ENST00000454583 CD46P15529 392 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 HOXB9P17482 250 aaPredicted RBP4.94□□□□□ -1.62
RIF1-207ENST00000454583 DRD1P21728 446 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 CPOXP36551 454 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 KCNC1P48547 511 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 ATP1A2P50993 1020 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 CCNHP51946 323 aaPredicted RBP4.94□□□□□ -1.62
RIF1-207ENST00000454583 TRIP13Q15645 432 aaPredicted RBP4.94□□□□□ -1.62
RIF1-207ENST00000454583 MLF2Q15773 248 aaPredicted RBP4.94□□□□□ -1.62
RIF1-207ENST00000454583 ZNF805Q5CZA5 627 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 SPANXN3Q5MJ09 141 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 PLA2G2CQ5R387 149 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 ATAT1Q5SQI0 421 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 GPRC6AQ5T6X5 926 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 PTCRAQ6ISU1 281 aaPredicted RBP4.94□□□□□ -1.62
RIF1-207ENST00000454583 PSAPL1Q6NUJ1 521 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 LIPIQ6XZB0 460 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 TPGS1Q6ZTW0 290 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 MFN1Q8IWA4 741 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 NRSN1Q8IZ57 195 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 ELMOD1Q8N336 334 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 ATPAF2Q8N5M1 289 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 FBF1Q8TES7 1133 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 UBLCP1Q8WVY7 318 aaPredicted RBP4.94□□□□□ -1.62
RIF1-207ENST00000454583 MFSD3Q96ES6 412 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 C9orf72Q96LT7 481 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 TBATAQ96M53 351 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 C7orf26Q96N11 449 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 PPP1R2P1Q96PQ5 205 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 RBBP8Q99708 897 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 FICDQ9BVA6 458 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 OSBPL1AQ9BXW6 950 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 SYNPO2LQ9H987 977 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 HEBP1Q9NRV9 189 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 HAUS2Q9NVX0 235 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 KLHL42Q9P2K6 505 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 SLC17A7Q9P2U7 560 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 PSMC3IPQ9P2W1 217 aaPredicted RBP4.94□□□□□ -1.62
RIF1-207ENST00000454583 SEPT3Q9UH03 358 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 CCDC163A0A0D9SF12 145 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 EDDM13A0A1B0GTR0 161 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 CAPN9O14815 690 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 LEFTY1O75610 366 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 JCHAINP01591 159 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 RHOCP08134 193 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 IRF1P10914 325 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 GNAZP19086 355 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 MGAT1P26572 445 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 ACADLP28330 430 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 ETFBP38117 255 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 SCTRP47872 440 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 ADPRHP54922 357 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 CDKN2DP55273 166 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 SPARCL1Q14515 664 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 PTPRCAPQ14761 206 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 PCLAFQ15004 111 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 LLGL1Q15334 1064 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 HIF1AQ16665 826 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 SLC44A4Q53GD3 710 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 CMPK2Q5EBM0 449 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 PCID2Q5JVF3 399 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 TTC19Q6DKK2 380 aaPredicted RBP4.94□□□□□ -1.62
RIF1-207ENST00000454583 SCYL2Q6P3W7 929 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 MACC1Q6ZN28 852 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 Q6ZS52 159 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 CEP128Q6ZU80 1094 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 OTOAQ7RTW8 1153 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 ABI3BPQ7Z7G0 1075 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 ZBTB44Q8NCP5 570 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 MAFAQ8NHW3 353 aaPredicted RBP4.94□□□□□ -1.62
RIF1-207ENST00000454583 BCAS4Q8TDM0 211 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 CYB5D2Q8WUJ1 264 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 DTD2Q96FN9 168 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 APOPT1Q96IL0 206 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 MAELQ96JY0 434 aaKnown RBP4.94□□□□□ -1.62
RIF1-207ENST00000454583 OMDQ99983 421 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 CCDC106Q9BWC9 280 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 XAB2Q9HCS7 855 aaKnown RBP4.94□□□□□ -1.62
RIF1-207ENST00000454583 ABCF3Q9NUQ8 709 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 IL36AQ9UHA7 158 aa4.94□□□□□ -1.62
RIF1-207ENST00000454583 PCOLCE2Q9UKZ9 415 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms