RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 YBEYP58557 167 aaPredicted RBP5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 DPYSQ14117 519 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 LBRQ14739 615 aaKnown RBP5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 AGERQ15109 404 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 PPP1R15BQ5SWA1 713 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ZNF648Q5T619 568 aaPredicted RBP5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ACBD5Q5T8D3 534 aaPredicted RBP5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 TMCO4Q5TGY1 634 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CDKAL1Q5VV42 579 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 AFMIDQ63HM1 303 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 LRRC66Q68CR7 880 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 TXNRD3NBQ6F5E7 133 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 DCUN1D2Q6PH85 259 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 TRIM72Q6ZMU5 477 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ZNF677Q86XU0 584 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 PHF13Q86YI8 300 aaPredicted RBP5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CPNE8Q86YQ8 564 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 BMPERQ8N8U9 685 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 AGBL5Q8NDL9 886 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 OR6C4Q8NGE1 309 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 HSPH1Q92598 858 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 RTP4Q96DX8 246 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ELMO2Q96JJ3 720 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CDH19Q9H159 772 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 NUP62CLQ9H1M0 184 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ABCG8Q9H221 673 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 NOD2Q9HC29 1040 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 AKAP7Q9P0M2 348 aaPredicted RBP5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 LUZP4Q9P127 313 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 SLC17A4Q9Y2C5 497 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 MAN2B2Q9Y2E5 1009 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 OAS3Q9Y6K5 1087 aaKnown RBP5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 LRBAP50851 2863 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 SHANK1Q9Y566 2161 aa5.97□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CRYBG3Q68DQ2 2970 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CXorf51AA0A1B0GTR3 108 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 SIGLEC16A6NMB1 481 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ZNF891A8MT65 544 aaPredicted RBP5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 LGALS16A8MUM7 142 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TNFRSF10CO14798 259 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 HGSO14964 777 aaPredicted RBP5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 DAPK3O43293 454 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 MFSD11O43934 449 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 STK17BO94768 372 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PGLSO95336 258 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PEX11BO96011 259 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PDGFAP04085 211 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PDHA1P08559 390 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 KRT7P08729 469 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 FURINP09958 794 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PNLIPP16233 465 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CR2P20023 1033 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 EEF1GP26641 437 aaKnown RBP5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CD82P27701 267 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 MIPP30301 263 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TRIM23P36406 574 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CASRP41180 1078 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 STAT1P42224 750 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 GPR1P46091 355 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CCR10P46092 362 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 SUOXP51687 545 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 NDST2P52849 883 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 COPB1P53618 953 aaKnown RBP5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 LIMK2P53671 638 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 AP1S1P61966 158 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PPP1CAP62136 330 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 SH3BP2P78314 561 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 DSC2Q02487 901 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CHAF1BQ13112 559 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 MAMLD1Q13495 774 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 UBAP2LQ14157 1087 aaKnown RBP5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 NR1D2Q14995 579 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 SEPT7Q16181 437 aaKnown RBP5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 LACTB2Q53H82 288 aaPredicted RBP5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PRR30Q53SZ7 412 aaPredicted RBP5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ARMC12Q5T9G4 340 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TMEM164Q5U3C3 297 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CPZQ66K79 652 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CRTC3Q6UUV7 619 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 KDELC2Q7Z4H8 507 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 C17orf82Q86X59 251 aaPredicted RBP5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 MCOLN2Q8IZK6 566 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ATPAF2Q8N5M1 289 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 NEK11Q8NG66 645 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 OR4D9Q8NGE8 314 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TMEM159Q96B96 161 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ABHD17AQ96GS6 310 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 BTBD6Q96KE9 485 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PSKH2Q96QS6 385 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TAAR9Q96RI9 348 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 RUFY1Q96T51 708 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 SLC38A3Q99624 504 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 AGPAT1Q99943 283 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 DDA1Q9BW61 102 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TBC1D10AQ9BXI6 508 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TEX101Q9BY14 249 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ZWILCHQ9H900 591 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 NT5MQ9NPB1 228 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 FANCLQ9NW38 375 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms