RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 BIRC2Q13490 618 aa10.64□□□□□ -0.71
DDX39A-203ENST00000454233 QPCTQ16769 361 aa10.64□□□□□ -0.71
DDX39A-203ENST00000454233 C14orf28Q4W4Y0 310 aa10.64□□□□□ -0.71
DDX39A-203ENST00000454233 C3orf38Q5JPI3 329 aa10.64□□□□□ -0.71
DDX39A-203ENST00000454233 CERCAMQ5T4B2 595 aa10.64□□□□□ -0.71
DDX39A-203ENST00000454233 KAZNQ674X7 775 aa10.64□□□□□ -0.71
DDX39A-203ENST00000454233 CCDC70Q6NSX1 233 aa10.64□□□□□ -0.71
DDX39A-203ENST00000454233 C11orf63Q6NUN7 778 aa10.64□□□□□ -0.71
DDX39A-203ENST00000454233 DOK6Q6PKX4 331 aa10.64□□□□□ -0.71
DDX39A-203ENST00000454233 SPOCD1Q6ZMY3 1216 aa10.64□□□□□ -0.71
DDX39A-203ENST00000454233 RFLNAQ6ZTI6 216 aa10.64□□□□□ -0.71
DDX39A-203ENST00000454233 TMTC1Q8IUR5 882 aa10.64□□□□□ -0.71
DDX39A-203ENST00000454233 CCDC50Q8IVM0 306 aa10.64□□□□□ -0.71
DDX39A-203ENST00000454233 RCOR2Q8IZ40 523 aa10.64□□□□□ -0.71
DDX39A-203ENST00000454233 EXD1Q8NHP7 514 aa10.64□□□□□ -0.71
DDX39A-203ENST00000454233 CCL4L1Q8NHW4 92 aa10.64□□□□□ -0.71
DDX39A-203ENST00000454233 GPBAR1Q8TDU6 330 aa10.64□□□□□ -0.71
DDX39A-203ENST00000454233 TFB1MQ8WVM0 346 aaKnown RBP10.64□□□□□ -0.71
DDX39A-203ENST00000454233 SCAMP4Q969E2 229 aa10.64□□□□□ -0.71
DDX39A-203ENST00000454233 IMP4Q96G21 291 aaKnown RBP10.64□□□□□ -0.71
DDX39A-203ENST00000454233 ATXN7L3BQ96GX2 97 aa10.64□□□□□ -0.71
DDX39A-203ENST00000454233 RBM41Q96IZ5 413 aaKnown RBP10.64□□□□□ -0.71
DDX39A-203ENST00000454233 HIC2Q96JB3 615 aa10.64□□□□□ -0.71
DDX39A-203ENST00000454233 ZNF578Q96N58 590 aaPredicted RBP10.64□□□□□ -0.71
DDX39A-203ENST00000454233 RIOK2Q9BVS4 552 aaKnown RBP10.64□□□□□ -0.71
DDX39A-203ENST00000454233 CEP41Q9BYV8 373 aa10.64□□□□□ -0.71
DDX39A-203ENST00000454233 CDH19Q9H159 772 aa10.64□□□□□ -0.71
DDX39A-203ENST00000454233 RBSNQ9H1K0 784 aa10.64□□□□□ -0.71
DDX39A-203ENST00000454233 SLC25A51Q9H1U9 297 aa10.64□□□□□ -0.71
DDX39A-203ENST00000454233 PKD2L2Q9NZM6 624 aa10.64□□□□□ -0.71
DDX39A-203ENST00000454233 RALYQ9UKM9 306 aaKnown RBP10.64□□□□□ -0.71
DDX39A-203ENST00000454233 SLC17A4Q9Y2C5 497 aa10.64□□□□□ -0.71
DDX39A-203ENST00000454233 ENTPD2Q9Y5L3 495 aa10.64□□□□□ -0.71
DDX39A-203ENST00000454233 ADAMTS20P59510 1910 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 CHD6Q8TD26 2715 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 RGSL1A5PLK6 1076 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 TMX2-CTNND1H3BSU7 103 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 NTN3O00634 580 aaPredicted RBP10.63□□□□□ -0.71
DDX39A-203ENST00000454233 INPP4BO15327 924 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 ZW10O43264 779 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 MTSS1O43312 755 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 NOBOXO60393 691 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 DXOO77932 396 aaKnown RBP10.63□□□□□ -0.71
DDX39A-203ENST00000454233 NDUFA10O95299 355 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 ASMTLO95671 621 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 SOD1P00441 154 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 RPLP0P05388 317 aaKnown RBP10.63□□□□□ -0.71
DDX39A-203ENST00000454233 PNLIPP16233 465 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 RBMS1P29558 406 aaKnown RBP10.63□□□□□ -0.71
DDX39A-203ENST00000454233 ADCY8P40145 1251 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 TNNT3P45378 269 aaPredicted RBP10.63□□□□□ -0.71
DDX39A-203ENST00000454233 POLD2P49005 469 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 SPINT3P49223 89 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 NAP1L1P55209 391 aaKnown RBP10.63□□□□□ -0.71
DDX39A-203ENST00000454233 CCL7P80098 99 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 GALNT3Q14435 633 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 HLTFQ14527 1009 aaKnown RBP eCLIP10.63□□□□□ -0.71
DDX39A-203ENST00000454233 LLGL1Q15334 1064 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 SLC14A2Q15849 920 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 PCSK7Q16549 785 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 TAZQ16635 292 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 TEX44Q53QW1 395 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 TFDP3Q5H9I0 405 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 KDELC2Q7Z4H8 507 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 DAAM2Q86T65 1068 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 CCNJLQ8IV13 435 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 KATNAL2Q8IYT4 538 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 Q8N9G6 341 aaPredicted RBP10.63□□□□□ -0.71
DDX39A-203ENST00000454233 WDR36Q8NI36 951 aaKnown RBP10.63□□□□□ -0.71
DDX39A-203ENST00000454233 ZDHHC1Q8WTX9 485 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 P3H4Q92791 437 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 CALR3Q96L12 384 aaKnown RBP10.63□□□□□ -0.71
DDX39A-203ENST00000454233 OR2M4Q96R27 311 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 STRADBQ9C0K7 418 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 LRRN3Q9H3W5 708 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 GOLPH3Q9H4A6 298 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 FAM83DQ9H4H8 585 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 GLOD4Q9HC38 313 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 THSD1Q9NS62 852 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 TAAR2Q9P1P5 351 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 LRIT1Q9P2V4 623 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 RABGEF1Q9UJ41 708 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 APPL1Q9UKG1 709 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 SATB2Q9UPW6 733 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 TMEM98Q9Y2Y6 226 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 EPN1Q9Y6I3 576 aaPredicted RBP10.63□□□□□ -0.71
DDX39A-203ENST00000454233 DMXL2Q8TDJ6 3036 aa10.63□□□□□ -0.71
DDX39A-203ENST00000454233 hCG_1818297A0A087WSY0 165 aa10.62□□□□□ -0.71
DDX39A-203ENST00000454233 CCDC187A0A096LP49 1063 aa10.62□□□□□ -0.71
DDX39A-203ENST00000454233 SOWAHDA6NJG2 315 aa10.62□□□□□ -0.71
DDX39A-203ENST00000454233 RHPN2P1A8MT19 583 aa10.62□□□□□ -0.71
DDX39A-203ENST00000454233 D6RAR5 112 aa10.62□□□□□ -0.71
DDX39A-203ENST00000454233 NUDT21O43809 227 aaKnown RBP10.62□□□□□ -0.71
DDX39A-203ENST00000454233 FUCA1P04066 466 aa10.62□□□□□ -0.71
DDX39A-203ENST00000454233 PTPN3P26045 913 aa10.62□□□□□ -0.71
DDX39A-203ENST00000454233 AK4P27144 223 aaPredicted RBP10.62□□□□□ -0.71
DDX39A-203ENST00000454233 ACTR1BP42025 376 aa10.62□□□□□ -0.71
DDX39A-203ENST00000454233 INHBCP55103 352 aa10.62□□□□□ -0.71
DDX39A-203ENST00000454233 PCBP4P57723 403 aaKnown RBP10.62□□□□□ -0.71
DDX39A-203ENST00000454233 ERVPABLB-1P60509 514 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms