RNA–Protein interactions for RNA: ENST00000453163.6

PDCD2-204, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-204ENST00000453163 PPP1R3AQ16821 1122 aa20.2■□□□□ 0.82
PDCD2-204ENST00000453163 CLEC6AQ6EIG7 209 aa20.2■□□□□ 0.82
PDCD2-204ENST00000453163 AFTPHQ6ULP2 937 aa20.2■□□□□ 0.82
PDCD2-204ENST00000453163 DNAJB7Q7Z6W7 309 aaPredicted RBP20.2■□□□□ 0.82
PDCD2-204ENST00000453163 PELI3Q8N2H9 469 aa20.2■□□□□ 0.82
PDCD2-204ENST00000453163 CARNMT1Q8N4J0 409 aa20.2■□□□□ 0.82
PDCD2-204ENST00000453163 SLC26A7Q8TE54 656 aa20.2■□□□□ 0.82
PDCD2-204ENST00000453163 L3HYPDHQ96EM0 354 aa20.2■□□□□ 0.82
PDCD2-204ENST00000453163 FAM192AQ9GZU8 254 aa20.2■□□□□ 0.82
PDCD2-204ENST00000453163 MEAF6Q9HAF1 191 aa20.2■□□□□ 0.82
PDCD2-204ENST00000453163 FAM50BQ9Y247 325 aa20.2■□□□□ 0.82
PDCD2-204ENST00000453163 MED16Q9Y2X0 877 aa20.2■□□□□ 0.82
PDCD2-204ENST00000453163 ANKRD12Q6UB98 2062 aa20.19■□□□□ 0.82
PDCD2-204ENST00000453163 LAMA3Q16787 3333 aa20.19■□□□□ 0.82
PDCD2-204ENST00000453163 A0A0U1RQS6 177 aa20.19■□□□□ 0.82
PDCD2-204ENST00000453163 ADSLP30566 484 aaPredicted RBP20.19■□□□□ 0.82
PDCD2-204ENST00000453163 FMO4P31512 558 aa20.19■□□□□ 0.82
PDCD2-204ENST00000453163 SLC39A11Q8N1S5 342 aa20.19■□□□□ 0.82
PDCD2-204ENST00000453163 EFHBQ8N7U6 833 aa20.19■□□□□ 0.82
PDCD2-204ENST00000453163 LPGAT1Q92604 370 aa20.19■□□□□ 0.82
PDCD2-204ENST00000453163 INTS10Q9NVR2 710 aaKnown RBP20.19■□□□□ 0.82
PDCD2-204ENST00000453163 UBXN8O00124 270 aa20.19■□□□□ 0.82
PDCD2-204ENST00000453163 TBL1XO60907 577 aa20.19■□□□□ 0.82
PDCD2-204ENST00000453163 PARNO95453 639 aaKnown RBP20.19■□□□□ 0.82
PDCD2-204ENST00000453163 HOXB8P17481 243 aaPredicted RBP20.19■□□□□ 0.82
PDCD2-204ENST00000453163 APLP1P51693 650 aa20.19■□□□□ 0.82
PDCD2-204ENST00000453163 CDH13P55290 713 aa20.19■□□□□ 0.82
PDCD2-204ENST00000453163 SMAD3P84022 425 aaKnown RBP20.19■□□□□ 0.82
PDCD2-204ENST00000453163 NFKB2Q00653 900 aa20.19■□□□□ 0.82
PDCD2-204ENST00000453163 GALNT1Q10472 559 aaPredicted RBP20.19■□□□□ 0.82
PDCD2-204ENST00000453163 TRAF2Q12933 501 aa20.19■□□□□ 0.82
PDCD2-204ENST00000453163 UNC50Q53HI1 259 aa20.19■□□□□ 0.82
PDCD2-204ENST00000453163 PTGR2Q8N8N7 351 aaPredicted RBP20.19■□□□□ 0.82
PDCD2-204ENST00000453163 TTC16Q8NEE8 873 aa20.19■□□□□ 0.82
PDCD2-204ENST00000453163 BHMTQ93088 406 aa20.19■□□□□ 0.82
PDCD2-204ENST00000453163 FAR2Q96K12 515 aa20.19■□□□□ 0.82
PDCD2-204ENST00000453163 FNDC3AQ9Y2H6 1198 aaKnown RBP20.19■□□□□ 0.82
PDCD2-204ENST00000453163 C2orf81A6NN90 581 aa20.18■□□□□ 0.82
PDCD2-204ENST00000453163 H0Y626 953 aa20.18■□□□□ 0.82
PDCD2-204ENST00000453163 RHOBTB1O94844 696 aa20.18■□□□□ 0.82
PDCD2-204ENST00000453163 SIX3O95343 332 aaPredicted RBP20.18■□□□□ 0.82
PDCD2-204ENST00000453163 HERVK_113P63132 956 aa20.18■□□□□ 0.82
PDCD2-204ENST00000453163 CNKSR3Q6P9H4 555 aa20.18■□□□□ 0.82
PDCD2-204ENST00000453163 AAGABQ6PD74 315 aa20.18■□□□□ 0.82
PDCD2-204ENST00000453163 AFAP1L2Q8N4X5 818 aa20.18■□□□□ 0.82
PDCD2-204ENST00000453163 ZNF558Q96NG5 402 aa20.18■□□□□ 0.82
PDCD2-204ENST00000453163 ERVK-6Q9BXR3 956 aa20.18■□□□□ 0.82
PDCD2-204ENST00000453163 TRIM4Q9C037 500 aa20.18■□□□□ 0.82
PDCD2-204ENST00000453163 POPDC3Q9HBV1 291 aa20.18■□□□□ 0.82
PDCD2-204ENST00000453163 ZNF334Q9HCZ1 680 aaPredicted RBP20.18■□□□□ 0.82
PDCD2-204ENST00000453163 PCDH10Q9P2E7 1040 aa20.18■□□□□ 0.82
PDCD2-204ENST00000453163 TRAF6Q9Y4K3 522 aa20.18■□□□□ 0.82
PDCD2-204ENST00000453163 LRRC14BA6NHZ5 514 aa20.18■□□□□ 0.82
PDCD2-204ENST00000453163 CCL5P13501 91 aa20.18■□□□□ 0.82
PDCD2-204ENST00000453163 ZXDBP98169 803 aa20.18■□□□□ 0.82
PDCD2-204ENST00000453163 HERC3Q15034 1050 aa20.18■□□□□ 0.82
PDCD2-204ENST00000453163 SETMARQ53H47 684 aaPredicted RBP20.18■□□□□ 0.82
PDCD2-204ENST00000453163 C16orf89Q6UX73 402 aa20.18■□□□□ 0.82
PDCD2-204ENST00000453163 BPIFA1Q9NP55 256 aa20.18■□□□□ 0.82
PDCD2-204ENST00000453163 FKBPLQ9UIM3 349 aa20.18■□□□□ 0.82
PDCD2-204ENST00000453163 ANKRD66B4E2M5 251 aa20.17■□□□□ 0.82
PDCD2-204ENST00000453163 SRP72O76094 671 aaKnown RBP20.17■□□□□ 0.82
PDCD2-204ENST00000453163 MT-CO1P00395 513 aa20.17■□□□□ 0.82
PDCD2-204ENST00000453163 MTHFD2P13995 350 aa20.17■□□□□ 0.82
PDCD2-204ENST00000453163 PSAPL1Q6NUJ1 521 aa20.17■□□□□ 0.82
PDCD2-204ENST00000453163 PAQR3Q6TCH7 311 aa20.17■□□□□ 0.82
PDCD2-204ENST00000453163 RNF111Q6ZNA4 994 aa20.17■□□□□ 0.82
PDCD2-204ENST00000453163 GK5Q6ZS86 529 aa20.17■□□□□ 0.82
PDCD2-204ENST00000453163 HERC6Q8IVU3 1022 aa20.17■□□□□ 0.82
PDCD2-204ENST00000453163 PIANPQ8IYJ0 282 aa20.17■□□□□ 0.82
PDCD2-204ENST00000453163 TRMOQ9BU70 441 aa20.17■□□□□ 0.82
PDCD2-204ENST00000453163 ENO3P13929 434 aaPredicted RBP20.17■□□□□ 0.82
PDCD2-204ENST00000453163 LPOP22079 712 aaPredicted RBP20.17■□□□□ 0.82
PDCD2-204ENST00000453163 PFKFB4Q16877 469 aa20.17■□□□□ 0.82
PDCD2-204ENST00000453163 CYHR1Q6ZMK1 362 aa20.17■□□□□ 0.82
PDCD2-204ENST00000453163 CHSY3Q70JA7 882 aa20.17■□□□□ 0.82
PDCD2-204ENST00000453163 WFDC5Q8TCV5 224 aa20.17■□□□□ 0.82
PDCD2-204ENST00000453163 ADAMTS19Q8TE59 1207 aa20.17■□□□□ 0.82
PDCD2-204ENST00000453163 JADE3Q92613 823 aa20.17■□□□□ 0.82
PDCD2-204ENST00000453163 ATOH8Q96SQ7 321 aa20.17■□□□□ 0.82
PDCD2-204ENST00000453163 NPAS2Q99743 824 aa20.17■□□□□ 0.82
PDCD2-204ENST00000453163 DDX50Q9BQ39 737 aaKnown RBP20.17■□□□□ 0.82
PDCD2-204ENST00000453163 STOML2Q9UJZ1 356 aa20.17■□□□□ 0.82
PDCD2-204ENST00000453163 VPS28Q9UK41 221 aa20.17■□□□□ 0.82
PDCD2-204ENST00000453163 IKZF3Q9UKT9 509 aa20.17■□□□□ 0.82
PDCD2-204ENST00000453163 PRPF19Q9UMS4 504 aaKnown RBP20.17■□□□□ 0.82
PDCD2-204ENST00000453163 PPP6CO00743 305 aa20.16■□□□□ 0.82
PDCD2-204ENST00000453163 NDUFS3O75489 264 aa20.16■□□□□ 0.82
PDCD2-204ENST00000453163 PENKP01210 267 aaPredicted RBP20.16■□□□□ 0.82
PDCD2-204ENST00000453163 LYNP07948 512 aa20.16■□□□□ 0.82
PDCD2-204ENST00000453163 POLE2P56282 527 aa20.16■□□□□ 0.82
PDCD2-204ENST00000453163 ILF2Q12905 390 aaKnown RBP20.16■□□□□ 0.82
PDCD2-204ENST00000453163 RAB33AQ14088 237 aa20.16■□□□□ 0.82
PDCD2-204ENST00000453163 TXNDC8Q6A555 127 aa20.16■□□□□ 0.82
PDCD2-204ENST00000453163 ARL14EPQ8N8R7 260 aaPredicted RBP20.16■□□□□ 0.82
PDCD2-204ENST00000453163 HMGCLL1Q8TB92 370 aa20.16■□□□□ 0.82
PDCD2-204ENST00000453163 TOP1MTQ969P6 601 aa20.16■□□□□ 0.82
PDCD2-204ENST00000453163 CCDC68Q9H2F9 335 aa20.16■□□□□ 0.82
PDCD2-204ENST00000453163 LHX3Q9UBR4 397 aa20.16■□□□□ 0.82
PDCD2-204ENST00000453163 FCF1Q9Y324 198 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms