RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 ITGB6P18564 788 aa11.64□□□□□ -0.55
GARNL3-210ENST00000453030 CD1CP29017 333 aa11.64□□□□□ -0.55
GARNL3-210ENST00000453030 ADCY8P40145 1251 aa11.64□□□□□ -0.55
GARNL3-210ENST00000453030 MMP13P45452 471 aa11.64□□□□□ -0.55
GARNL3-210ENST00000453030 HCAR3P49019 387 aa11.64□□□□□ -0.55
GARNL3-210ENST00000453030 ATP1A2P50993 1020 aa11.64□□□□□ -0.55
GARNL3-210ENST00000453030 ARSDP51689 593 aa11.64□□□□□ -0.55
GARNL3-210ENST00000453030 ZNF135P52742 658 aaPredicted RBP11.64□□□□□ -0.55
GARNL3-210ENST00000453030 DPYSL2Q16555 572 aa11.64□□□□□ -0.55
GARNL3-210ENST00000453030 ARMC12Q5T9G4 340 aa11.64□□□□□ -0.55
GARNL3-210ENST00000453030 POLNQ7Z5Q5 900 aa11.64□□□□□ -0.55
GARNL3-210ENST00000453030 FAM129CQ86XR2 697 aa11.64□□□□□ -0.55
GARNL3-210ENST00000453030 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.64□□□□□ -0.55
GARNL3-210ENST00000453030 NSMCE1Q8WV22 266 aa11.64□□□□□ -0.55
GARNL3-210ENST00000453030 SPOCK2Q92563 424 aa11.64□□□□□ -0.55
GARNL3-210ENST00000453030 ART4Q93070 314 aa11.64□□□□□ -0.55
GARNL3-210ENST00000453030 CSPG4P5Q96PW8 444 aa11.64□□□□□ -0.55
GARNL3-210ENST00000453030 OR2M4Q96R27 311 aa11.64□□□□□ -0.55
GARNL3-210ENST00000453030 FUCA2Q9BTY2 467 aa11.64□□□□□ -0.55
GARNL3-210ENST00000453030 NT5MQ9NPB1 228 aa11.64□□□□□ -0.55
GARNL3-210ENST00000453030 KCTD5Q9NXV2 234 aa11.64□□□□□ -0.55
GARNL3-210ENST00000453030 TMEM9Q9P0T7 183 aa11.64□□□□□ -0.55
GARNL3-210ENST00000453030 MYO6Q9UM54 1294 aa11.64□□□□□ -0.55
GARNL3-210ENST00000453030 SLC17A4Q9Y2C5 497 aa11.64□□□□□ -0.55
GARNL3-210ENST00000453030 TMEM98Q9Y2Y6 226 aa11.64□□□□□ -0.55
GARNL3-210ENST00000453030 LRRK2Q5S007 2527 aa11.63□□□□□ -0.55
GARNL3-210ENST00000453030 IGHV1OR21-1A0A087WYE8 117 aa11.63□□□□□ -0.55
GARNL3-210ENST00000453030 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.63□□□□□ -0.55
GARNL3-210ENST00000453030 PPM1DO15297 605 aa11.63□□□□□ -0.55
GARNL3-210ENST00000453030 ARHGAP6O43182 974 aa11.63□□□□□ -0.55
GARNL3-210ENST00000453030 ZW10O43264 779 aa11.63□□□□□ -0.55
GARNL3-210ENST00000453030 PPFIA2O75334 1257 aa11.63□□□□□ -0.55
GARNL3-210ENST00000453030 SOD1P00441 154 aa11.63□□□□□ -0.55
GARNL3-210ENST00000453030 IVLP07476 585 aa11.63□□□□□ -0.55
GARNL3-210ENST00000453030 THRAP10827 490 aa11.63□□□□□ -0.55
GARNL3-210ENST00000453030 CSTF2P33240 577 aaKnown RBP eCLIP11.63□□□□□ -0.55
GARNL3-210ENST00000453030 SERPINB6P35237 376 aa11.63□□□□□ -0.55
GARNL3-210ENST00000453030 PCK1P35558 622 aa11.63□□□□□ -0.55
GARNL3-210ENST00000453030 GPR3P46089 330 aa11.63□□□□□ -0.55
GARNL3-210ENST00000453030 CSRP3P50461 194 aa11.63□□□□□ -0.55
GARNL3-210ENST00000453030 LIMK2P53671 638 aa11.63□□□□□ -0.55
GARNL3-210ENST00000453030 KLHL30Q0D2K2 578 aa11.63□□□□□ -0.55
GARNL3-210ENST00000453030 CLCA4Q14CN2 919 aa11.63□□□□□ -0.55
GARNL3-210ENST00000453030 MARC1Q5VT66 337 aa11.63□□□□□ -0.55
GARNL3-210ENST00000453030 LRRC66Q68CR7 880 aa11.63□□□□□ -0.55
GARNL3-210ENST00000453030 TXNRD3NBQ6F5E7 133 aa11.63□□□□□ -0.55
GARNL3-210ENST00000453030 ATG14Q6ZNE5 492 aa11.63□□□□□ -0.55
GARNL3-210ENST00000453030 IL22RA1Q8N6P7 574 aa11.63□□□□□ -0.55
GARNL3-210ENST00000453030 CCDC112Q8NEF3 446 aa11.63□□□□□ -0.55
GARNL3-210ENST00000453030 SCAMP4Q969E2 229 aa11.63□□□□□ -0.55
GARNL3-210ENST00000453030 AP2M1Q96CW1 435 aa11.63□□□□□ -0.55
GARNL3-210ENST00000453030 SCRN2Q96FV2 425 aa11.63□□□□□ -0.55
GARNL3-210ENST00000453030 TAAR9Q96RI9 348 aa11.63□□□□□ -0.55
GARNL3-210ENST00000453030 MCCC1Q96RQ3 725 aaPredicted RBP11.63□□□□□ -0.55
GARNL3-210ENST00000453030 KCNK4Q9NYG8 393 aa11.63□□□□□ -0.55
GARNL3-210ENST00000453030 IL17BQ9UHF5 180 aa11.63□□□□□ -0.55
GARNL3-210ENST00000453030 TTLL3Q9Y4R7 772 aa11.63□□□□□ -0.55
GARNL3-210ENST00000453030 B3GALT1Q9Y5Z6 326 aa11.63□□□□□ -0.55
GARNL3-210ENST00000453030 TRBV23OR9-2A0A075B6M9 112 aa11.62□□□□□ -0.55
GARNL3-210ENST00000453030 EFCAB7A8K855 629 aa11.62□□□□□ -0.55
GARNL3-210ENST00000453030 TERTO14746 1132 aaKnown RBP11.62□□□□□ -0.55
GARNL3-210ENST00000453030 INPP4BO15327 924 aa11.62□□□□□ -0.55
GARNL3-210ENST00000453030 MFSD11O43934 449 aa11.62□□□□□ -0.55
GARNL3-210ENST00000453030 MAP3K6O95382 1288 aa11.62□□□□□ -0.55
GARNL3-210ENST00000453030 PDHA1P08559 390 aa11.62□□□□□ -0.55
GARNL3-210ENST00000453030 RARAP10276 462 aa11.62□□□□□ -0.55
GARNL3-210ENST00000453030 GZMAP12544 262 aa11.62□□□□□ -0.55
GARNL3-210ENST00000453030 SKILP12757 684 aa11.62□□□□□ -0.55
GARNL3-210ENST00000453030 LIFP15018 202 aa11.62□□□□□ -0.55
GARNL3-210ENST00000453030 TEAD1P28347 426 aa11.62□□□□□ -0.55
GARNL3-210ENST00000453030 UGT1A3P35503 534 aa11.62□□□□□ -0.55
GARNL3-210ENST00000453030 CDH6P55285 790 aa11.62□□□□□ -0.55
GARNL3-210ENST00000453030 TYRO3Q06418 890 aa11.62□□□□□ -0.55
GARNL3-210ENST00000453030 ITKQ08881 620 aa11.62□□□□□ -0.55
GARNL3-210ENST00000453030 TRA2AQ13595 282 aaKnown RBP eCLIP11.62□□□□□ -0.55
GARNL3-210ENST00000453030 PEX6Q13608 980 aa11.62□□□□□ -0.55
GARNL3-210ENST00000453030 CLPPQ16740 277 aaPredicted RBP11.62□□□□□ -0.55
GARNL3-210ENST00000453030 TDRD12Q587J7 1177 aaKnown RBP11.62□□□□□ -0.55
GARNL3-210ENST00000453030 SNAP47Q5SQN1 464 aa11.62□□□□□ -0.55
GARNL3-210ENST00000453030 XKR5Q6UX68 686 aa11.62□□□□□ -0.55
GARNL3-210ENST00000453030 ADAMTSL4Q6UY14 1074 aa11.62□□□□□ -0.55
GARNL3-210ENST00000453030 CLEC17AQ6ZS10 378 aa11.62□□□□□ -0.55
GARNL3-210ENST00000453030 TECPR1Q7Z6L1 1165 aa11.62□□□□□ -0.55
GARNL3-210ENST00000453030 GALNT13Q8IUC8 556 aa11.62□□□□□ -0.55
GARNL3-210ENST00000453030 AGBL5Q8NDL9 886 aa11.62□□□□□ -0.55
GARNL3-210ENST00000453030 OR4D9Q8NGE8 314 aa11.62□□□□□ -0.55
GARNL3-210ENST00000453030 SLC37A2Q8TED4 501 aa11.62□□□□□ -0.55
GARNL3-210ENST00000453030 NKD1Q969G9 470 aa11.62□□□□□ -0.55
GARNL3-210ENST00000453030 TRIM11Q96F44 468 aa11.62□□□□□ -0.55
GARNL3-210ENST00000453030 AHCYL2Q96HN2 611 aaKnown RBP11.62□□□□□ -0.55
GARNL3-210ENST00000453030 BTBD6Q96KE9 485 aa11.62□□□□□ -0.55
GARNL3-210ENST00000453030 GBP4Q96PP9 640 aa11.62□□□□□ -0.55
GARNL3-210ENST00000453030 AGAP2Q99490 1192 aa11.62□□□□□ -0.55
GARNL3-210ENST00000453030 SEMA3CQ99985 751 aa11.62□□□□□ -0.55
GARNL3-210ENST00000453030 ABCG8Q9H221 673 aa11.62□□□□□ -0.55
GARNL3-210ENST00000453030 PCDH18Q9HCL0 1135 aa11.62□□□□□ -0.55
GARNL3-210ENST00000453030 MRPL47Q9HD33 250 aaKnown RBP11.62□□□□□ -0.55
GARNL3-210ENST00000453030 RTN4Q9NQC3 1192 aaKnown RBP11.62□□□□□ -0.55
GARNL3-210ENST00000453030 OCIAD1Q9NX40 245 aa11.62□□□□□ -0.55
GARNL3-210ENST00000453030 SUV39H1O43463 412 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms